Michael Mina Profile picture
Sep 15, 2021 13 tweets 4 min read Read on X
Rapid tests work very well to answer 🧵
AM I INFECTIOUS and a RISK TO OTHERS

This is THE public health ? we care about

I made a BIG chart of rapid tests

- Overall sensitivity vs any PCR pos - what FDA judges

- Sensitivity if infectious (97%!) - what we actually care about

1/ Image
This data above comes from the UK COVID-19 Lateral Flow Oversight Team.

What the data above shows is that rapid tests are excellent public health tools to quickly identify almost anyone who is currently infectious and needs to isolate

What it also shows is...
2/
This shows why there is so much damn confusion about if rapid tests are sensitive

Answer: YES they are... if the question is "Am I Infectious Now and do I need to isolate"

However, if we compare them to PCR, then we are asking a different question: Do I have any RNA in me

3/
For Public Health, we want to identify & isolate (+ trace) ONLY ppl who are currently infectious. And, if someone is currently infectious, then we must know FAST - not tomorrow (duh) and definitely not in 3 days!

We don't care much about if someone was infectious last month.

4/
So, rapid tests are perfect public health tools!

Rapid Tests continue to get a bad wrap bc Docs (& regulators) fail to distinguish:

A Med Device: Do I have any RNA in me, even if from an infxn 3 weeks ago... & I don't care how long the result takes
vs
A Public Health Tool!

5/
We must define the tools we are using during this pandemic

We cannot keep putting public health tools in the same bin as medical devices

It is THE reason we lack these critical public health tools in the US - bc FDA is asking them to do something they aren't designed to do

6/
There is a solution for US to accelerate access to tests
We just define these PUBLIC HEALTH tools - during a PUBLIC HEALTH emergency - as... PUBLIC HEALTH tools & not medical devices

Simple?

Then, CDC can evaluate them based on *public health* metrics
7/
The chart in the First tweet of this thread is adapted from this terrific paper by the UK COVID-19 Later Flow Oversight Team - which has (arguably) had the most experience using and evaluating rapid antigen tests in the world now.

medrxiv.org/content/10.110…
8/
Also, the chart not only shows Sensitivity, but also Specificity

For Public Health especially, It's extremely important to have high specificity so we don't get a lot of false psitives. These top tests have great specificity with only 0 or 1 in 1000 turning falsely positive.

9/
This graph shows relationship between time, viral load and transmissibility - and why Sensitivity against PCR looks horrible, even if the test is 100% sensitive to catch infectious people.

The infectious period is days. PCR is not specific for this & stays pos for weeks

10/ Image
Why is Defining a rapid test as a public health tool so important?

it's because there is a massive supply of rapid tests across the globe yet very few are available to American's bc we regulate them as medical devices... making it nearly impossible to gain an FDA EUA.

11/
This is because when defined as a medical device, the comparison is to the gold-standard medical device: PCR.

As the data in the first tweet in the thread shows, a 100% sensitive & specific test for being contagious will only have a 50% or lower sensitivity against PCR...

12/
The reason is simple

The gold-standard PCR FDA requires rapid Ag tests to compare to is NOT SPECIFIC for the public health ? being asked: Am I infectious?

It's not that rapid tests have low sensitivity - it's actually that the PCR has low specificity for a public health ?

13/

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More from @michaelmina_lab

Oct 3
🧵 On Seasonality:
SARS-CoV-2 has "seasonality" as a contributor to transmission dynamics

People often refute it - So I made graphs and this thread

NOTE: Seasonality does NOT = "just a cold"
Many of worst viruses have seasonality

Transmission Dynamics ≠ Pathogenicity

1/Image
Image
Image
The first figure is Wastewater SARS-CoV-2 RNA levels averaged across the whole United States

See the REMARKABLE stability in the winter peak

The peak happens in the exact same week each year

Additionally, the start up the upswing to the peak (triangles) is also consistent

2/Image
A common misconception is that "Seasonality" means "no transmission out of season"

That is NOT TRUE

Seasonal forces are those that drive predictable behavior - like a winter peak in the first week of each year

3/
Read 14 tweets
Aug 18
Huge News for access to STI tests in the U.S. to help curb the growing syphilis epidemic

The @US_FDA just authorized the first fully at home OTC test for syphilis

A finger prick blood test for antibodies against the bug that causes it (T. Pallidum)

1/

nbcnews.com/health/sexual-…
For a number of decades, syphilis has been trending up in the U.S.

The cause isn’t singularly but likely is associated with relaxations of prevention of STIs in the context of more effective prophylaxis for HIV (PrEP). Plus general lack of awareness



2/publichealth.jhu.edu/2024/why-is-sy…
When left untreated, Syphilis can have devastating consequences on human health

Luckily there is very simple treatment for it (a form of Penicillin) but it only works if you take it - and you only take it if you know you have syphilis

Hence the importance of an OTC test!

3/
Read 7 tweets
May 3
Such a bad interpretation that stands to harm patient care

Let's not throw the baby out w the bathwater for COVID-19 (and flu etc)!

Suggesting to only run PCR & not rapid means most (50%-80%) of patients get WORSE care & at higher costs

Here's why:

A 🧵

1/
When I see publications & docs say “don’t use a rapid test, only use a PCR”

it assumes this is an OR only situation

Ridiculous!

A rapid test is… RAPID… and highly affordable

You lose ~nothing by it and give your patient the opportunity to GAIN tremendously

2/
If the test is positive, then for that 80%+ of culture positive ppl … your job is done immediately

You’ve spent $5 and 5 minutes and they can get on treatment right away

If you didn’t do it, it will be be 1-2 days and ~$150 before they can get started on treatment

3/
Read 10 tweets
Apr 20
Here we go again with this asinine cautious approach to testing for H5N1

CDC is NOT recommending that people with no symptoms - but who have had contact w infected animals - be tested at all… and certainly are not recommending a swab w any frequency.

Though we should have learned it in 2020, Here’s why this doesnt make sense:

1/Image
Firstly, tests are our eyes for viruses. It’s literally how we see where viruses are

If we wait until people are getting sick, we may have missed a major opportunity to find viruses jumping into humans before they learn to become so efficient in us that they cause disease

2/
So waiting until we actually have highly pathogenic strains harming humans - when we have a pretty discreet population at the moment to survey - is short sighted

3/
Read 11 tweets
Jan 16
A lot of questions still on:

How long should I isolate?

Do I need to isolate?

When can I go back to work?

Is 5 days enough?

What if I’m still positive?

Why am I not positive when I first get symptoms?

This thread below (and the embedded thread) goes through many of these questions
Now that symptoms start earlier w COVID (bc immunity activates symptoms fast after exposure)

A frequent ? that comes up is what this means for Paxlovid

Often ppl think it means you have to start Paxlovid earlier

Nope - Opposite! You have more time

2/
Bc symptoms start faster but the growth of the virus still takes about the same time as it used to…

Symptom onset today is ~2d post exposure where before it was ~5d

So, as far as virus growth is concerned, day 5 post symptoms (when the trials took place) is day ~8 today

3/
Read 6 tweets
Jan 8
A heartbreaking consequence of lapses in vaccination!

A measles outbreak is spreadinf in Philadelphia.

MEASLES! It sends kids to the hospital, erases existing immune memory (creating long term risks) and kills 1 in 1000

It was eliminated in the US, but we seem hell bent on reversing that

inquirer.com/health/measles…
A particularly deadly consequence of measles is its erasure of previously acquired immune memory - setting kids and adults up for infections that they shouldn’t be at risk from!

We found for example that measles can eliminate as much as 80% of someone’s previously acquired immunity to other pathogens!
science.org/doi/full/10.11…
Image
Read 6 tweets

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