Two doses doesn’t provide nearly as much neutralisation vs. Omicron, especially for Oxford/AstraZeneca recipients. Titres wane, and for 2xPfizer, ~half have no quantifiable neutralisation vs Omicron after 3 months (but nearly all still neutralise Alpha and Delta) 2/n
Differential in Omicron neutralisation after only 2 doses is much clearer when stratifying by those who reported having prior COVID symptoms *plus* 2 doses vaccine. 3/n
Those who had “breakthrough” infections following 2 vaccine doses (nearly all Delta) produced a strong neutralisation response to Omicron, akin to a 3rd vaccine dose. 4/n
Participants who had a 3rd dose are older (b/c how the UK prioritised boosting), so age-matching our cohort allows a direct comparison: ⏭️THREE doses vs. Omicron gives equivalent tires to ⏩TWO doses vs. Delta... 5/n
... but does that mean a successful booster campaign has 🔄“reset” the 🇬🇧 UK back to July 2021 state??? Maybe. Vaccine efficacy vs symptomatic illness is broadly in line with titres. (it’s lower, but VE data is confounded by older age, and... 6/n
... also possible that changes in Omicron cell type / physiological site of infection (e.g. upper respiratory tract vs lower) means that the level of neutralising antibodies needed for sterilising immunity is now higher. 7/n
vs. last July, we now also have effective antivirals for those that are at risk of severe disease... and some monoclonal Abs still work (our data below shows Xevudy (sotrovimab from Vir/GSK) still neutralises, but Ronapreve (casirivimab/imdevimab from Regeneron) does not. 8/n
Neutralising antibody titres are still a good CORRELATE of protection... in effect they show us a“high water mark” for the overall response vs. Omicron, esp. since their production lies *downstream* of T-cell and B-cell responses. cell.com/immunity/fullt… 9/n
Lots of open questions re. Omicron: how fast do titres wane in different cohorts? What about mRNA-boosted Oxford/AstraZeneca recipients? How much does Omicron breakthrough infection boost titres? (We are working as fast as we can!) 10/n
Going forward, all this will work best if we can pool *AND* standardise results from different labs... a great illustration by Deborah Cromer, David Khoury and colleagues @KirbyInstitutethelancet.com/journals/lanmi… 11/n
We use a set of synthetic controls calibrated to the WHO International Standard that are stable, broadly neutralising, and can be produced in unlimited quantities. We’ll be releasing them “open-source” in the coming year to anyone who wants them. 12/n
It will also still be critical to monitor responses to vaccination against emerging variants in vulnerable populations -- esp. those that don’t respond well to vaccination e.g. those on kidney dialysis @bealelab & w/blood cancer (leukaemia) @TurajlicLab. 13/n
Overall, as the pandemic progresses, we think studies w/large cohorts like ours are important, since they can sample the range of immunological histories that capture much of the present heterogeneity in a population, MORE so than a handful of clinical trial participants...14/n
...and comparison to recent, RELEVANT variants w/rich REAL-WORLD vaccine efficacy data (e.g. Omicron vs. Alpha and Delta) will be much more informative than e.g. the breathless tweets last month trumpeting "🚨20-40x reduction" in neutralisation vs. ancestral Wuhan-Hu-1 spike 15/n
All this work is possible because of the development of a high-throughput live-virus neutralisation assay by @MaryYiWeiWu, @DrUlferts, Ruth Harvey and Mike Howell; and virus isolates from Gavin Screaton @OxfordMedSci distributed by #G2P-UK led by @wendybarclay11 16/n
& by the amazing team @UCLHresearch & @TheCrick pulling together clinicians, virologists, robotics experts, database designers, structural biologists + more to contribute their expertise... and by Bryan Williams, @CharlesSwanton & @LabGandhi who established Legacy study 17/n
...and speaking of which, all this would not be possible without the 🤩 amazing Legacy study participants 🧑🤝🧑@TheCrick and @UCLH who continue to book up study visits🩸🧪 week after week: THANK YOU!
(PS. get boosted!). 17/17
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Urgent correction is needed to the many breathless (re)tweets this evening relaying news that antigen Lateral Flow Tests work against "the" Omicron variant
... significant diversity apparent in Nucleocapsid gene (detected by LFTs) in Omicron... 1/n
thanks to urgent sequencing work by @Tuliodna and South African colleagues that was not visible at all just a few days ago.⏩ SO: we need to know the genome sequence of that Omicron case's N gene before drawing conclusions about LFTs efficacy in "the" Omicron variant... 2/n
and not just S-gene dropout / target failure alone. Speaking of which, there are also Omicron variant viruses that DON'T have S-gene dropout, so not clear to what extent this is diagnostic. May be misled more by countries targeting sequencing at S-gene drpouts in coming days. 3/n
If you don't watch InfoWars (yes, that one) regularly, you might have missed my star turn in the antivax world. To cement the academic cliché, I wrote a Guardian piece about it... theguardian.com/commentisfree/… ... and thought I'd put a few more thoughts here 🧵 1/n
First the apparently obligatory summary. Get vaccinated. Now. Take the afternoon off. Even if you had COVID before. The vaccines are safe. 2/n
One of the things that I find interesting (and didn't make it into the Guardian article) is how much disinformation exists at the interface between traditional media & social media... in this case, a traditional media interview getting cropped and shared 3/n
After 1 dose, wide distribution becomes clearer when you ask people if they have had COVID. Suggests Oxford/AZ vaccine is very good at boosting existing immunity, like mRNA: science.sciencemag.org/content/372/65… (So NO antivaxxers, the vaccine doesn’t ‘destroy’ your natural immunity🤦) 2/n
Comparing Oxford/AZ to Pfizer/BioNTech: consistent across variants -- BOTH are generating broad Ab responses, and really good match to real-world vaccine efficacy & models of correlates of protection (2.5x less Ab = ~20% less VE for testing positive)... 3/n
Increased age & time since 2nd dose correlated with reduced virus neutralisation across all strains tested. Not a surprise, but given low starting titres vs B.1.617.2, more of a concern to see neutralisation “dropping off”, significantly. Boosters more likely to be needed 2/n
To maximise population coverage, the UK delayed 2nd dose from 3 weeks to ~12 weeks in early 2021. Was a good strategy vs. B.1.1.7, but single-dose vaccine recipients have significantly less ability to neutralise B.1.617.2 -- so strategy now more complicated 3/n