The first author is Alice @ AC_Williamson, a terrific PhD student with Claudia and me. In 2000 with @satya Dash009 , #David Savage we described a family where a mutation in a Rab-GAP for GLUT4, TBC1D4, impaired GLUT4 translocation in response to insulin in muscle and fat/2.
The mutation co-segregated with extremely high post-meal insulin levels. Clearly, the normal pancreas was somehow sensing the abnormally slow rate of disappearance of glucose into muscle and fat tissues, where both GLUT4 and TBC1D4 are normally expressed/3
As these genes are not expressed in liver, fasting insulin levels were normal (actually sl. low as the mutation causes a constant trickle of GLUT4 to the pl. membrane, depleting the intracellular pool so little is available to be translocated in resp. to insulin)/4.
In 2014 #TorbenHansen reported a similar mutation (in this case disrupting an isoform of TBC1D4 only expressed in skeletal muscle) at high frequency in Greenland Inuit population, where it is associated with post prandial (but not fasting) hyperinsulinemia and hyperglycaemia/5
So, people can be differentially sensitive to the glucose lowering effects of insulin in the post prandial vs the fasting state. Insulin resistance (and/or the compensatory hyperinsulinemia that results from it) is a key precursor to many cardio-metabolic illnesses/6
There have been many GWAS of insulin resistance. But such studies have had a principal focus on the fasting state, during which insulin controls glucose metabolism largely through its effects on glucose production by the liver (a process which doesn’t involve GLUT4)/7
The gold standard test for muscle insulin sensitivity is a hyperinsulinemic clamp with stable isotope measures of glucose disappearance. Such studies are very intensive and not suitable for large scale population genetic studies/8
So we used as a surrogate the fold increase in plasma insulin between the fasting state and 2 hrs after an oral glucose tolerance test. We also used the Stumvoll index as a sanity check, though this does reflect both fasting and post prandial insulin status)/9
Relevant data was available from ~55K ppl from multiple international studies and Alice and my gen. epi colleagues did their magic. An intronic polymorphism in the GLUT4 gene itself was highly significantly associated with increased Insulin Fold Change (IFC). Which was cool! /10
@klmohlke’s lab showed that this variant was associated with lower GLUT4 expression in human skeletal muscle and lower GLUT4 gene transcription in cells transfected with a construct containing that intronic variant/11
GLUT4 has been studied for decades and what we found was sort of obvious from previous mouse work, but it was gratifying to see human biology doing what we expected it to do. We found several other loci associated with IFC at genome wide levels of significance/12
Some of these encompassed “usual suspects” in ins. action e.g. IRS-1. To explore other loci functionally we turned to a system developed by @DPhaz in the @IMSMRL who has been using 3T3L1 adipocytes in which GLUT4 trafficking can be studied by two independent methodologies/13
Alice knocked down all the candidate genes in the IFC-associated loci and found 14 genes, interference with which caused highly significant alterations in either GLUT4 expression or trafficking. Please see the paper for the indiv. genes; there are some fascinating ones/14
Some look particularly druggable. In some cases inhibition increases GLUT4 movement to the cell surface, suggesting that blocking these could be insulinomimetic. Like all exciting studies this work has raised lots of great questions for follow up/ end.
A special thanks to @InesBarroso4 who kept us on the straight and narrow when writing the MS thereby greatly enhancing its quality
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As a young teenager growing up in Ireland in the early 1970s, when daily news was a torrent of identity politics fuelling hatred and violence, the copies of Scientific American @sciam that my father regularly bought for me were like refreshing draughts of sanity. It was clear
that the elegant beauty of biology and the potential usefulness of its ingenious application transcended any racial or religious boundaries and held out the hope of helping all of humanity. How depressing to read in the pages of this once inspiring journal that "empiricism" is
now to be derided, as it is something pursued only by people of one particular skin colour and that any interest in exploring genetic factors influencing susceptibility to any human trait will automatically lead to an accusation of racism. The author of the @sciam piece works
There's no doubt that biology strongly influences the risk of becoming obese. Evidence for reduced energy expenditure being involved is much weaker than for variation in control of appetite. Not sure that the results of the fasting studies cited below support the latter /
e.g. Take an obese person with 60Kg lean and 40kg fat and a lean person with 60kg lean and 10 kg fat and deprive them of all calories. Glycogen will disappear rapidly and they will both burn fat (9 kCal/G) at rate determined by the largely by their lean mass /
So if they both burn off 5g of their stored fat the obese person will have lost 5% of their body weight and the lean person will have lost 7%, with no difference in their rate of fat mobilisation. (would be good to have @JohnSpeakman4) thoughts on this thread /
Before I go off Twitter for a week or so to get on with proper work it might be helpful, at least for some correspondents, to review a few pretty well established facts 1. Obesity has become more common in the recent past (precise trajectories depend on which country) \
2 This is very unlikely to have anything to do with genetics 3. This is most likely to do with an obesogenic food environment combined with a reduced need to expend energy in work and domestic life 4. In all societies, and at all times, some people have been obese and some not
5. Whenever it has been measured the heritability of "fatness" is very high. Most clearly through studies of identical vs non identical twins. Even more strikingly with studies of separated twins brought up in different families.
Here is a testable hypothesis for why male sex, BMI, ethnicity and T2D status are related to COVID 19 mortality. Unlike ppl with hypertension, T2D pts who die get ventilated more frequently (recent NYC JAMA paper). The infection obviously impairs their alveolar function. For any
given BMI, males and ppl of sth asian ethnicity tend to have more ectopic lipid. Women/Caucasians store more in sub. cut. adipocytes. Lung alveolar cells can accumulate lipid pathologically in overnourished states (PMID 20061442). Could impair their response/survival.
Infected cells often switch from lipid to glucose metabolism (like cancer cells/Warburg). Lipid-laden cells often show metabolic inflexibility If this idea is correct then might a hypocaloric diet depleting ectopic lipid help increase resilience to COVID19 infection?.