T. Ryan Gregory Profile picture
Dec 13 9 tweets 2 min read Twitter logo Read on Twitter
You know me, I like to work through lists of possible explanations for stuff. We're seeing a huge surge in COVID wastewater signal in several places, are there are several possible (non-mutually-exclusive) explanations for it that are worth contemplating. 🧵
Why so much COVID in wastewater? Several non-mutually-exclusive possibilities: 1. More cases, 2. More virus per case in general, 3. More virus in the gut specifically, 4. Longer-lasting infections.
1. More COVID cases. The most obvious explanation, and the one that raises the most alarm, is that there are just a LOT of COVID infections right now. (And absent evidence that something has changed, this is the default).
2. Higher average viral load per infection overall, meaning that each person sheds more virus because each person has more virus in their body. (Again, this would require evidence to back it up, which we don't have currently.)
3. Higher viral load specifically in the digestive tract. Tropism of the virus (i.e., which tissues it infects) can shift, so it's possible that newer variants hang out in the gut more and thus are shed in greater amounts in wastewater. (Again, no evidence currently.)
4. Longer-lasting infections. If people are infected and shed virus for longer, there will be more overlap in shedding among cases, and thus more virus in wastewater overall even without a change in total number of cases. (You guess it, no evidence currently.)
Right now, the assumption remains that there is just a huge number of infections right now. But some of the other possible factor could be involved too, which is why we need to continue monitoring wastewater and studying evolving variant lineages.
It's worth noting whether other metrics (test positivity for non-wastewater, hospitalizations, etc.) are following the same pattern of increase right now. (Yes)

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More from @TRyanGregory

Dec 8
Two terms that I think are used too loosely are "immunity debt/gap" and "immune dysfunction". The strongest, all-or-nothing, just-so story versions of both are problematic. 🧵
"Immunity debt" is a new term (since 2021) that, in one sense simply refers to the well-known and obvious population-level phenomenon by which there come to be more susceptible hosts after a period of low infection and/or vaccination.
However, the problems with "immunity debt" are:

1. It gets invoked to blame lockdowns 3 years ago as *the* explanation for every surge in infections. It is usually vague and not presented in a testable way, no alternative hypotheses are presented (let alone falsified)...
Read 20 tweets
Nov 29
I reserve the right to be horrified by the death, suffering, grief, fear, or abuse of any humans regardless of nationality, faith, language spoken, sex, gender, sexual orientation, skin colour, age, socioeconomic status, disabilities, or any other factor that is used to divide.
I reserve the right to criticize the words, policies, actions, or inactions of political leaders at any level of government in any part of the world, without this being misconstrued as an attack aimed at the people of any group, geographical region, or nation.
I reserve the right to identify and call out propaganda, disinformation, logical fallacies, biases, untruths, and manipulations by anyone on any topic.
Read 7 tweets
Nov 28
The variant designated JN.1 is, quite rightly, getting attention because of its very rapid growth rate. We've been asked why it doesn't have its own nickname yet. Here's a summary of why we are *currently* sticking with "Pirola clan". 🧵
We've been trying to emphasize that what matters now is not individual variants that will cause "the next big wave", but *evolving lineages*. In particular, we noted that, as divergent as it is, stock BA.2.86 (Pirola) would likely not take off, but its *descendants* could.
So, we're disinclined to give new nicknames to multiple descendants within a lineage, when what we've said is that it's actually those lineages that matter more. We also haven't named anything else within Eris clan or Kraken clan for the same reason.
Read 7 tweets
Nov 26
Here is a quick reminder of what variant trackers have been saying for months now.

🧵
1. The pattern has not been "one new variant, one big wave" since summer 2022 in most places. Rather, there is a soup of rapidly-evolving variant lineages that keep the baseline high. It's not about tsunamis, it's the high sea level.
I've been saying it's not about tsunamis but rising sea level since October 2022, and especially since January 2023.

Read 10 tweets
Nov 25
Is your argument valid or is it a logical fallacy? Let's explore.
1. Calling out hypocrisy vs. Tu quoque fallacy:

✅ Calling out hypocrisy: "You criticizing others for doing bad things while failing to acknowledge the bad things you do is hypocritical. Your bad things should *also* be criticized and you should face up to them."
❌ Tu quoque ("you also"): "Your criticism of the bad things I do is not valid, or the bad things I do are justified, because you do bad things also."

en.wikipedia.org/wiki/Tu_quoque…
Read 7 tweets
Nov 16
I once read an explanation for why folks like Jehovah's Witnesses and Mormons engage in what are mostly futile attempts to recruit new followers. It never made any sense to me why so much energy would be invested in what is almost always an unsuccessful project.

1/
The reason, according to the former member, is that it's not actually about convincing new people to join. it's about having the proselytizers rejected and even ridiculed by outsiders. Cohesion is then strengthened as it bilsters an "us vs. the world" narrative.

2/
I have really struggled to understand why the propaganda during this war has been so obviously, even comically, ineffective. I have heard arguments that the intent is to undermine confidence in news reports generally.

3/
Read 11 tweets

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