parm Profile picture
Nov 25, 2024 8 tweets 4 min read Read on X
A friend asked me to explain DNA, RNA, and epigenetics. he said that others had tried before, but it didn’t click for him.

I happen to play the piano, so I gave him a simple, albeit imperfect, analogy.

After this analogy, he finally understood! Here’s the piano analogy.

🧵 Image
Imagine a piano with 30,000 keys. Each key represents a gene.

Nearly all of your somatic cells have the exact same piano—the same keys, the same genes. So why does a nerve cell look different from a cheek cell?

Because they’re playing different pieces on the identical pianos. Image
Image
The piano is just a set of keys! The music—the composition—is the result of playing specific keys in a particular sequence and rhythm.

Pressing a key to play a note is like expressing a gene to produce mRNA. Image
Playing a note multiple times => multiple mRNA molecules from that gene.

Within a cell, the pattern of mRNA expression changes over time, just like the notes change over time in a musical score.

At any given moment, a fraction of the keys are being played. Image
Epigenetics is like the way the piano is played.

Some keys are easy to press; others harder to reach or require more effort.

Some keys might be muted or locked in certain cells; impossible to play there but functional in others. some keys play indirectly when you press another. Image
Image
These differences to a key, like heavier key, muted key, hard to reach key, can be written on the keys themselves (for one cell). Here’s a register of various epigenetic changes in “keys”

As before, this register may change based on cell, type of cell, etc. Image
These performances are recorded into songs, much like proteins are synthesized based on mRNA templates.

Proteins are the final products—they have specific structures and functions, giving cells their unique characteristics.

The mRNA (the notes you play) might degrade quickly, but the proteins (the recorded songs) can remain in the cell as long as needed.Image
Image
So, even though every cell has the same “piano,” the diverse “music” played leads to different cell types and functions.

I hope this analogy makes DNA, RNA, and epigenetics clearer!

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More from @prmshra

Jan 21
I didn’t hear them when they attacked Indians and Hindus incessantly. Christmas to new year.

I didn’t hear anything. Except anti H1B narratives. From those who are not against illegal immigration.

Just because you don’t like us, doesn’t mean it was not, for the first time, hard for me to go outside and feel ok. Bernie Sanders called it “indentured servitude” and then nothing.

I hated my skin for a few days. I felt afraid. I got death threats. I was told I will get deported, over and over again. You said nothing.

The silence is deafening, and if it weren’t for the technologists, no one except us. That’s who was for us.

Your anti racism disappeared when the immigration narrative became about legal immigration. You aren’t virtuous. You are merely vengeful.
Even the e/acc movement defended us and then said “they’ll come after AI next which is why I defend you.” I will remember that.

The funny thing about being an Indian woman is that they will say disgusting, horrifying things about you, and most people will act like nothing happened at all. The ones who stand up for you will say that they don’t see color.

And that’s fine. But don’t you dare ever come to me and tell me you care for racism.

Don’t laugh at us and tell me you ever cared. You didn’t.

The lesson I learned that day is that no one cares and no one will.
And you know what? That’s ok. 🙏
Read 6 tweets
Dec 9, 2024
many requested a deep-dive on androgenetic alopecia—male pattern baldness

male pattern baldness/hair loss (MPB/MPHL) affects 30-50% of men by age 50.

let's talk about the biology, current treatments, and cutting-edge research on hair follicle (HF) regeneration. Image
MPB is a complex polygenic disorder

it is influenced by
-androgens (male sex hormones)
-aging
-environmental factors.

it causes progressive miniaturization of hair follicles in genetically susceptible areas of the scalp Image
under the influence of androgens like DHT, follicles go from producing robust “terminal” hairs to fine “vellus” hairs.

they spend more time resting, producing thinner hairs each cycle.

most people do not even notice they are losing hair until a majority of the hair is gone. Image
Read 30 tweets
Nov 27, 2024
In a surprising paper published in Nature, scientists accomplished what sounds impossible: using genes from a single-celled organism to create mouse stem cells, which eventually developed into a living, breathing mouse. Image
Animal multicellularity emerged ~700mn years ago.

The genes in this study—from choanoflagellates, ancient single-celled organisms—are somewhat of evolutionary relics.

They predate multicellular life and now appear to have played a foundational role in animal development. Image
Choanoflagellates don’t form stem cells, but they have versions of Sox and POU genes.

In animals, these same genes drive pluripotency—the ability of stem cells to turn into any cell type. Image
Read 11 tweets
Nov 22, 2024
we recently saw an insane discovery in biology, which if true, in my opinion, makes extraterrestrial life far far more likely.

🧵 Image
new research suggests that life on Earth became surprisingly complex very early, reshaping our understanding of life’s origins and its implications for the existence of life elsewhere in the universe. Image
a paper about the Last Universal Common Ancestor (LUCA) hypothesis reconstructed the genome of our LUCA, dating it to about 4.2 billion years ago…

…just a few hundred million years after Earth formed 4.5 billion years ago. Image
Read 19 tweets
Nov 1, 2024
i had the chatGPT search extension on for about 10 minutes and reverted back to google and some plex. search holds potential, but here's why it's not good enough *yet*.

why: i want as many links as possible when researching. if i want something with context, perplexity will give me a long list of citations with a cohesive answer. chatGPT search is a nice addition to chatGPT itself, but it's not my search engine atm, unfortunately.

also, instead of making it the default search engine, installing an extension that overrides the default on chrome feels suss. but i'm going to wait to see if there's a reason for this.
a few more notes: asking a followup has returned the same answer for me, similar to how perplexity was in its early days. the search query is not fully parsed and understood yet, especially when there's parts to the query.

o1 is a powerhouse. search is a welcome addition, but does not yet hold anywhere close to a competitive advantage.

i don't like that the extension necessarily overrides the search engine until you disable that setting. it's too early to fully commit to something like this and i wish there was so much more in the extension than this setting
also when i exit search in a chat, i want normal gpt back, but it seems to persist being in search mode

i would like the gpt experience well enmeshed into the search chat agent but they are completely distinct from each other
Read 8 tweets
Jul 23, 2024
let's talk biological age.
aging markers boost health management, refine life expectancy, and enhance well-being. yet, consensus on the very idea of aging is still in the works.

here's my thread 1 of 3 on biological age markers.

🧵OPEN THE THREAD🧵
here's what we do know
- age is a significant marker across the board
- people age differently
- it is biological, rather than chronological, age that actually matters in medicineImage
clinicians in routine checkups are actually often measuring biological age.

this includes max. O2 consumption, kidney function, inflammatory markers, grip strength, sit-and-reach, soft lean mass, and more.

these may be insufficient in isolation - more on that later. Image
Read 24 tweets

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