Outbreak Updates Profile picture
Dec 6 8 tweets 2 min read Read on X
The H5N1 outbreaks in the U.S. are no longer isolated incidents 🧵

Human cases in California and Missouri appear to share the same clade, B3.13.

This link raises the possibility of a novel transmission pathway.

Milk products.

1/
Both cases are classified as “unknown origin” since there is no evidence of direct exposure to poultry, which is the traditional reservoir for H5N1 in humans.

This lack of an avian connection points to a new, potentially mammalian host.

2/
The detection of B3.13 in two states separated by over 1,500 miles points to a virus that may already be circulating beyond localized clusters.

The virus is not limited to isolated spillover events from birds but could be spreading through a shared pathway.

2/
The B3.13 clade represents a genetically stable form of H5N1.

The appearance of the same clade in different regions implies a SHARED risk factor.

This could involve infected livestock, contaminated food distribution systems, or an undetected vector facilitating human exposure to H5N1.

3/
A single clade being responsible for multiple cases increases the likelihood of a transmissible variant.

If B3.13 is capable of infecting humans across different locations and without direct exposure to birds, it signals that the virus may be adapting for broader human infectivity.

4/
If the sequence from the infected toddler aligns with yesterday’s GISAID update, it points to a virus that is genetically intact and stable.

This stability means an evolutionary process that allows the virus to replicate efficiently and maintain its structure in a host environment.

This is particularly alarming when that host is a mammal.

5/
A match between the toddler’s sequence and the GISAID upload would indicate enough stability to infect humans without direct avian exposure.

H5N1 may already be circulating through alternative pathways, such as milk or other dairy products, with indirect human exposure.

6/
What are the implications for global trade if dairy cattle are confirmed as a reservoir?

7/7

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More from @outbreakupdates

Dec 4
The situation unfolding in the Democratic Republic of the Congo is serious 🧵

Dozens are dead in a matter of weeks, and we don’t even know what’s killing them.

Here’s why this is truly concerning.

1/
The official count is probably a fraction of the reality.

Many die at home, never making it into any statistics.

The symptoms (fever, cough, anemia) are vague, but the lethality isn’t.

2/
The affected areas are rural, impoverished, and have virtually no medical infrastructure.

If this spreads to urban centers, the already overstretched healthcare capacity of the DRC (currently overwhelmed by mpox) will implode.

3/
Read 5 tweets
Dec 3
H5N1 is no longer a distant threat confined to birds.

It’s becoming a clear and present danger to humanity.

It’s closing the gap between animal-to-human transmission and the one thing we all dread:

Sustained human-to-human spread.

🧵

1/ Image
The findings on H5N1’s 2022 strain are a brutal warning.

Rhis virus is becoming more adept at targeting humans.

It binds to cells in the human respiratory tract with greater efficiency than H5N1 from 2005, and even rivals the attachment and replication ability of H3N2.

Which caused the deadly 1968 pandemic.

2/
We’ve seen this play out before.

In 1918, an avian-origin H1N1 virus mutated to spread between humans.

It killed an estimated 50 million people worldwide.

The 1968 H3N2 pandemic killed over a million people.

Both started with zoonotic viruses slowly adapting to human hosts.

3/
Read 8 tweets
Nov 26
The teenager in British Columbia is a preview of what pandemic risk truly looks like 🧵

A single critical case, no clear source, and the absence of a transmission chain.

It’s a script we know too well, and one we’re doing nothing to rewrite.

1/
A single human infected with H5N1, a virus notorious for its catastrophic mortality in avian and human hosts, now lies in airborne isolation, lungs failing, held alive by machines.

2/
The case has already revealed two mutations in the virus.

One making it better at binding to human cells, the other driving infection deep into the lungs.

They are evidence of a virus edging closer to a species barrier it was never supposed to cross.

3/
Read 11 tweets
Nov 21
H275Y mutation in Canada's H5N1 poultry strains is a red flag.

This mutation, linked to Tamiflu resistance, doesn’t typically show up in North American wild bird influenza strains.

And it's likely driven by human intervention.

1/
H275Y cripples the effectiveness of our main antiviral.

In a pandemic scenario, we lose one of the only tools to slow the virus in humans.

2/
Historically, H275Y has been observed in specific strains of influenza

But its appearance in H5N1 poultry strains in Canada is novel

The low pathogenicity avian influenza strains found in birds in N America rarely carry this mutation

The fact that it’s now appearing in farmed poultry suggests an interaction between human antiviral use & viral evolution.

3/
Read 7 tweets
Nov 20
The 1918 flu wiped out 90% of adults in Brevig Mission, Alaska. 🧵

It carried a key mutation: PB2 E627K.

Now, H5N1 is showing signs of similar adaptation.

The strain detected in a Canadian teenager also carries PB2 E627K.

1/
In 1918, this mutation was pivotal in the virus’s jump from birds to humans and its ability to spread rapidly.

Despite lacking other mutations (Q226L / G228S) commonly associated with avian viruses adapting to human-like receptors, the 1918 virus exploited the mutations it had to devastating effect.



2/wwwnc.cdc.gov/eid/article/9/…
The Canadian teen also carries D190E, a mutation linked to altered receptor binding preference.

While H5 viruses typically bind to avian-type receptors, this mutation shifts the virus toward binding human-like receptors.

A critical step in zoonotic transmission.

3/
Read 6 tweets
Oct 25
The real threat posed by Mpox 🧵

I believe that diseases that disproportionately affect marginalized groups cannot be left to burn out on their own.

1/
The social and moral costs of neglect far exceed the apparent savings in resources.

Failure to act reinforces a hierarchy of value.

Some lives are considered less worthy of protection.

2/
Think back to the early days of the HIV/AIDS crisis in the 1980s.

When it was first recognized, the response from the government and public was, at best, apathetic and, at worst, outright hostile.

3/
Read 14 tweets

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