Peter Miller Profile picture
Jan 29 24 tweets 7 min read Read on X
I said the CIA, FBI, and DoE haven't shared why they think covid is a lab leak.

We can infer they don't have much evidence, because they can't even agree on which lab it leaked from:


But there is actually one article with details about the FBI's logic.
This WSJ article interviews former FBI scientist Jason Bannan and talks through some of his reasoning.
archive.is/eESVGImage
It honestly reads a lot like the same kind of debates you see on Twitter.

Some FBI scientists thought it was weird that the closest bat viruses are found in Yunnan, far away from Hubei. Image
Maybe that is weird, but it's also the same thing that happened with SARS1 in 2003. The closest ancestors to SARS were found in Yunnan, but the virus was found at markets in Guangdong and Hubei provinces. Image
These viruses can only spread well in places where there's a high density of humans, so an outbreak is more likely to start in a market in a big city, and less likely to happen on a rural farm.

Also, if a few people get sick on a farm, no one is going to detect those cases.
So these viruses are going to show up at a market in some big city, in southern or central China. (they eat less wildlife the north + regulations are better in some cities)

Guangzhou is probably a more likely place for a spillover than Wuhan, but neither are unreasonable places.
The article also had some more detailed discussion about genetics, apparently lead by 3 scientists at the Defense Intelligence Agency, who influenced Bannan and his colleagues at the FBI. Image
The paper written by those 3 scientists has been made public:


It offers a theory for how SARS-CoV-2 was made. docs.house.gov/meetings/VC/VC…Image
That's a theory that was sometimes used in 2020, Yuri Deigin also proposed it in his famous medium article: Image
What's a receptor binding domain? Why would scientists combine a bat virus and a pangolin virus?

It's all a little bit complicated.
Early in 2020, we noticed that SARS-CoV-2 binds well to the ACE2 receptor in human cells, just like the 2003 SARS virus did.

But SARS2 binds in a different way than SARS1 did.

It looks like SARS2 is actually less efficient at binding than SARS1 is. Image
Kristian Andersen wrote a complicated argument about why no one would likely engineer this particular method of binding. It's not what any computer model would predict. So he said it must have come from natural selection. Image
The next thing we discovered in 2020 were pangolin viruses that also bind to human ACE2, and they do so in about the same way that SARS2 does.

So that also suggested that this feature of the virus came from nature.
Somewhere along the way, the WIV disclosed a virus called RATG-13, that's 96% similar to SARS2.

It happens to be much less similar in the one place, the receptor binding domain, which effects how the virus binds to ACE2.

But these pangolin viruses were closer in that spot. Image
So, some people theorized that maybe scientists could have combined a bat virus and a pangolin virus to make SARS-CoV-2.
That might have sounded good at the time, but that theory died in 2021, because other scientists went out looking in more caves and discovered bat viruses that have the same receptor binding domain as SARS2. Image
Those viruses (like BANAL-52) have a receptor binding domain that's even closer than the pangolin viruses.

That makes it very clear that this feature originated in nature, and pangolins aren't necessary.

So, if that's the FBI's theory, their theory has been wrong since 2021!
That doesn't necessarily mean that the lab leak theory is wrong.

Lab leak theorists saw these same viruses in 2021 and decided these were great evidence.

They thought these made the lab leak theory even stronger! Image
The new lab leak theory is that maybe a lab found one of these other viruses before 2020 and did some gain of function research on it.
And, of course, that's hard to disprove, with absolute confidence.

We have pretty good evidence that the WIV did not have such a virus, because they published their collection of related viruses in the middle of 2019.
And the intelligence reports actually say they have no proof that the lab had such a virus:
But you can always make up some story about secret viruses, unpublished viruses, secret research programs, or whatever.

And in the end it just becomes an argument about probability. What are the odds they found that secret virus and did this specific work on it?
I tend to think the way the lab leak theory keeps mutating is, in itself, evidence that this is all unlikely.

Most of this is just motivated reasoning by people who really want to blame scientists, then work backwards to try to come up with some way "they could have done it".
More than anything, I think this story shows that the intelligence agencies probably don't have any special information.

They have a few scientists, looking at the same data as everyone else is, subject to the same political biases as everyone else is.

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More from @tgof137

Dec 3, 2024
The final report is out from the Congressional Subcommittee on the Coronavirus Pandemic.

Here's a thread looking at what they discovered about covid origins and how this compares to other government reports:
To put this in context, this is not the opinion of the whole US government, it's the opinion of some house Republicans.

There have already been several house and senate GOP reports that claimed that covid is a lab leak.
But there are other politicians who've seen all the same intelligence and think there's no conclusive evidence for that.
Read 59 tweets
Sep 19, 2024
A thread on the raccoon dog DNA found at the Huanan market, and what those samples can and can not prove about covid's origins:
The story of how the raccoon dog DNA data came to light is almost as interesting as the data itself.
Huanan market was shut down at the end of 2019, after a novel virus (covid) was found spreading among the employees. Over the next few weeks, Chinese scientists took 900+ samples at the market.
Read 74 tweets
Jun 11, 2024
A new article by Zeynep claims that scientists lost the public's trust, enabling covid conspiracy theories to form.

I think it's a bad take, and it's mostly missing the story.
archive.is/UZSwC
I can't entirely disagree, because I've previously written similar things about people losing trust in the news. Image
But I know people who've fallen for conspiracy theories and this is just never the reason

When I ask why they're afraid of vaccines, it's never, "I used to listen to scientists but I lost trust"

It's more like:
"I saw a Youtube video"
"I heard a podcast"
"I read it on Substack"
Read 52 tweets
Apr 24, 2024
Did the Wuhan lab have a secret virus that they could have used to create SARS-CoV-2? 🧵
Last week's lab leak controversy claimed that the WIV had 15,000 secret samples and 700 undisclosed viruses.


Image
Image
Image
Image
We already know that the WIV had about 20,000 samples, 2,000 viruses, and 200 sarbecoviruses.
archive.ph/UhpY5#selectio…
Read 57 tweets
Apr 12, 2024
Lab leak supporters aren't very good at understanding science or data, but they are really good at creating controversy.

The latest manufactured controversy involves a diagram I used in the Rootclaim debate which ended up in Scott Alexander's blog post:
The diagram I used is not the same as the original in Pekar 2021's paper. That looks like this: Image
Pekar created a model which includes the date of the first ascertained case as well as other factors. So they have one graph for the assumption of a Nov 17th case and one for a Dec 1st case.

As of 2021, some people thought there might be hospitalized covid cases that early.
Read 31 tweets
Mar 26, 2024
I tried simulating the early covid epidemic in Wuhan to better understand a few questions:

When did covid start?

Did it start with 2 introductions of the virus, or only one?
During the early covid epidemic in Wuhan, there were 2 separate strains of the virus floating around: Lineages A and B.

These viruses were only 2 mutations apart, so it's not obvious whether they are separate, or one mutated into the other.
At first, it wasn't even known that they were distinct -- some people thought that there might be intermediate genomes between the two. Most of those were later ruled out:

(though that's currently being debated again)
Read 59 tweets

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