Discover and read the best of Twitter Threads about #Bellwether

Most recents (22)

#COVID19 #VariantDashboard - #UnitedStates

TOP lineages (#21DAYTRENDS*):

28.4% XBB.1.5
8.1% XBB.1.16
4.4% XBB.1.16.1
4.4% XBB.1.9.1
3.3% EU.1.1.1
2.8% XBB.1.9.2

[Includes ~42% Airport surveillance seqs]

#SARSCoV2 Tracker: tinyurl.com/mryj4uu7| 06/02/23

1/n
Sequence count by US States

A total of 999 sequences were submitted with specimen collection dates on or after 05/12/2023 (of which 421 were collected via airport surveillance)

2/n Image
Sequences from Airport Surveillance -

@CDCgov Traveler Based Surveillance Program [Currently at 7 international airports from 6 US States (#California, #NewYork, #Washington, #NewJersey, #Georgia and #Virginia)]

3/n Image
Read 8 tweets
#COVID19 #VariantDashboard - #UnitedStates

TOP lineages (#21DAYTRENDS*):

29.7% XBB.1.5
8.5% XBB.1.16
5.3% XBB.1.9.1
3.8% XBB.1.16.1
3.5% EU.1.1.1
2.4% FL.4

[Includes ~43% Airport surveillance seqs]

#SARSCoV2 Tracker: tinyurl.com/mryj4uu7| 06/01/23
1/n
Sequence count by US States

A total of 949 sequences were submitted with specimen collection dates on or after 05/11/2023 (of which 410 were collected via airport surveillance)

2/n Image
Sequences from Airport Surveillance

-@CDCgov Traveler Based Surveillance Program [Currently at 7 international airports from 6 US States (#California, #NewYork, #Washington, #NewJersey, #Georgia and #Virginia)]

3/n Image
Read 8 tweets
#COVID19 #VariantDashboard - #UnitedStates

TOP lineages (#15DAYTRENDS):

31.5% XBB.1.5
11.8% XBB.1.16
5.3% XBB.1.9.1
2.5% XBB.1.16.1
2.1% FL.4
2.1% XBB.1.5.49

[Includes ~44.5% Airport surveillance seqs]

#SARSCoV2 Tracker: tinyurl.com/mryj4uu7| 05/24/23

1/n Image
Sequence count by US States

A total of 527 sequences were submitted with specimen collection dates on or after 05/09/2023

2/n Image
.@CDCgov updated variant proportions estimates on 05/12/2023 (updated every other Friday)

Nowcast moves to 2-week estimates


3/n
Read 7 tweets
#COVID19 #VariantDashboard - #UnitedStates

TOP lineages (#15DAYTRENDS):
30.3% XBB.1.5
11.0% XBB.1.16
5.9% XBB.1.9.1
3.4% XBB.1.16.1
1.8% FL.4
1.6% EG.2
1.4% XBB.2.3.2

[Includes ~49% Airport surveillance seqs]

#SARSCoV2 Tracker: tinyurl.com/mryj4uu7| 05/23/23
1/n Image
Sequence count by US States

A total of 564 sequences were submitted with specimen collection dates on or after 05/08/2023

2/n Image
.@CDCgov updated variant proportions estimates on 05/12/2023 (updated every other Friday)

Nowcast moves to 2-week estimates


3/n
Read 7 tweets
#COVID19 #VariantDashboard - #UnitedStates

TOP lineages (#15DAYTRENDS):

37.9% XBB.1.5
9.2% XBB.1.16
4.4% XBB.1.9.1
2.8% XBB.1.16.1
2.2% XBB.1.9.2
2.0% XBB.2.3.2

[Includes ~26% Airport surveillance seqs]

#SARSCoV2 Tracker: tinyurl.com/mryj4uu7| 05/22/23

1/n Image
Sequence count by US States

A total of 497 sequences were submitted with specimen collection dates on or after 05/07/2023

2/n Image
.@CDCgov updated variant proportions estimates on 05/12/2023 (updated every other Friday)

Nowcast moves to 2-week estimates

3/n
Read 7 tweets
#COVID19 #VariantDashboard - #UnitedStates

TOP lineages (#15DAYTRENDS):

56.2% XBB.1.5
6.1% XBB.1.9.1
4.5% XBB.1.16
2.2% XBB.1.5.1
2.1% XBB.1.9.2
1.4% XBB.1.5.13
1.4% XBB.1.5.15
1.4% XBB.1.5.17

#SARSCoV2 Tracker: tinyurl.com/mryj4uu7 Updated: 05/01/23

1/n Image
#COVID19 #VariantDashboard - #USA
[without sequences from "Airport Surveillance"]

Top lineages (#15DayTrends):

XBB.1.5 (61.7%)
XBB.1.9.1 (5.5%)
XBB.1.16 (2.4%)
XBB.1.5.1 (2.3%)
XBB.1.5.13 (1.6%)
XBB.1.5.17 (1.6%)
XBB.1.9.2 (1.6%)
XBB.1.5.15 (1.3%)
FD.2 (1%)

2/n Image
Airport sequences constitute ~12.4% of sequences with sample collection dates in the last 15 days (#15DayTrends)

Its going to be a three way race to outcompete XBB.1.5*: XBB.1.9* vs XBB.1.16* vs XBB.2.3*

As of now, XBB.1.16* family looks to over take everything else!

3/n Image
Read 17 tweets
#COVID19 #VariantDashboard - #UnitedStates

TOP lineages (#15DAYTRENDS):

49.7% XBB.1.5
8.3% XBB.1.16
8.3% XBB.1.9.1
2.3% XBB.1.9.2
2.1% XBB.1.16.1
1.6% XBB.1.5.1
1.4% XBB.2.3

>> Low Sequence Count <<
#SARSCoV2 Tracker: tinyurl.com/mryj4uu7 Updated: 04/30/23

1/n
#COVID19 #VariantDashboard - #USA
[without sequences from "Airport Surveillance"]

Top lineages (#15DayTrends):

XBB.1.5 (61.1%)
XBB.1.9.1 (8.0%)
XBB.1.16 (3.5%)
FL.2 (1.7%)
XBB.1.5.1 (1.7%)
XBB.1.5.17 (1.7%)
XBB.1.9.2 (1.4%)
XBB.1.5.15 (1.2%)

2/n Image
Airport sequences constitute a significant proportion of sequences (~27%; #15DayTrends)

Its going to be a three way race to outcompete XBB.1.5*: XBB.1.9* vs XBB.1.16* vs XBB.2.3*

As of now, XBB.1.16* family looks to over take everything else!

3/n Image
Read 18 tweets
#COVID19 #VariantDashboard - #UnitedStates

TOP lineages (#15DAYTRENDS):

52.8% XBB.1.5
9.5% XBB.1.16👀
4.7% XBB.1.9.1
2.6% XBB.1.16.1👀
2.3% XBB.1.9.2
1.3% EG.1
1.2% XBB.2.3
1.2% XBB.1.5.15

#SARSCoV2 Tracker: tinyurl.com/mryj4uu7 Updated: 04/20/23

1/n Image
Use "Airport Surveillance" (AS) pull-down menu to easily track variant proportions Nationally or by State with or without AS sequences

Top lineages (#15DayTrends w/o AS seqs):

XBB.1.5 (64%),
XBB.1.9.1 (3.8%),
XBB.1.16 (3%),
XBB.1.5.19 (1.6%),
XBB.1.9.2 (1.4%)

2/n Image
Sequence count by US States

#NewYork & #California have submitted a big share of sequences with specimen collection dates on or after 04/05/2023

XBB.1.5 is still at the top spot; followed by XBB.1.9.1 and XBB.1.16

3/n Image
Read 17 tweets
#COVID19 #VariantDashboard - #UnitedStates

TOP lineages (#15DAYTRENDS):

60.7% XBB.1.5
7.3% XBB.1.16👀
4.1% XBB.1.9.1
1.3% XBB.1.5.1
1.3% XBB.1.9.2
1.2% XBB.1.5.19
1.1% XBB.1.16.1👀
1.0% XBB.1.5.31

#SARSCoV2 Tracker: tinyurl.com/mryj4uu7 Updated: 04/19/23
1/n Image
Use "Airport Surveillance" (AS) pull-down menu to easily track variant proportions Nationally or by State with or without AS sequences

Top lineages (#15DayTrends w/o AS seqs):

XBB.1.5 (65.9%),
XBB.1.9.1 (4.2%),
XBB.1.16 (3.4%),⬆️👀
XBB.1.5.19 (1.4%),
XBB.1.5.1 (1.3%)

2/n Image
Sequence count by US States

#NewYork, #California, #Arizona, #NorthCarolina and #Utah have submitted a big share of sequences with specimen collection dates on or after 04/04/2023

XBB.1.5 is still at the top spot; followed by XBB.1.9.1 and XBB.1.16

3/n Image
Read 18 tweets
#COVID19 #VariantDashboard - #UnitedStates

TOP lineages (15-DAY TRENDS):

39.95% BA.2.12.1**,
26.82% BA.5^^,
12.74% BA.4^^,
6.33% BA.2,
5.56% BA.5.1^^,
4.85% unassigned &
0.78% BA.2.9

**S:L452Q; ^^S:L452R/F486V

Tracker: tinyurl.com/mryj4uu7
#OmicronUpdates 07/01/22
#OmicronVariantUpdates #UnitedStates 07/01/22

Top 5 lineages:
BA.2.12.1, ⬇️ (Spike: L452Q)
BA.5, ⬆️ (Spike: L452R)
BA.4 ⬆️ (Spike: L452R)
BA.2 ⬇️
BA.5.1 ⬆️👀 (Lineage prevalent in #Portugal)

* includes recently designated BA.2.x.y and undesignated BA.2s
BA.5*/BA.4* hotspots - #UnitedStates #15DayTrends
Read 12 tweets
#COVID19 #VariantDashboard - #UnitedStates

TOP lineages (15-DAY TRENDS):

42.18% BA.2.12.1**,
25.49% BA.5^^,
12.44% BA.4^^,
7.05% BA.2,
5.04% BA.5.1^^,
3.79% unassigned and
0.86% BA.2.9

**S:L452Q; ^^S:L452R/F486V

Tracker: tinyurl.com/mryj4uu7
#OmicronUpdates 6/30/22
#OmicronVariantUpdates #UnitedStates 06/30/22

Top 5 lineages:
BA.2.12.1, ⬇️ (Spike: L452Q)
BA.5, ⬆️ (Spike: L452R)
BA.4 ↔️ (Spike: L452R)
BA.2 ⬇️
BA.5.1 ⬆️👀 (Lineage prevalent in #Portugal)

* includes recently designated BA.2.x.y and undesignated BA.2s
BA.5*/BA.4* hotspots - #UnitedStates #15DayTrends

All eyes on #NewYork!
Read 12 tweets
#COVID19 #VariantDashboard - #UnitedStates

TOP lineages (15-DAY TRENDS):

42.63% BA.2.12.1**,
24.97% BA.5^^,
12.82% BA.4^^,
7.48% BA.2,
5.13% BA.5.1,
2.93% unassigned and
1.04% BA.2.9

**S:L452Q; ^^S:L452R/F486V

Tracker: tinyurl.com/mryj4uu7
#OmicronUpdates 6/29/22
#OmicronVariantUpdates #UnitedStates 06/29/22

Top 5 lineages:
BA.2.12.1, ⬇️ (Spike: L452Q)
BA.5, ⬆️ (Spike: L452R)
BA.4 ⬆️ (Spike: L452R)
BA.2 ⬇️
BA.5.1 ⬆️👀 (Lineage prevalent in #Portugal)

* includes recently designated BA.2.x.y and undesignated BA.2s
BA.5*/BA.4* hotspots - #UnitedStates #15DayTrends

All eyes on #NewYork!
Read 12 tweets
#COVID19 #VariantDashboard - #UnitedStates

TOP lineages (15-DAY TRENDS):

43.89% BA.2.12.1**,
23.48% BA.5^^,
12.63% BA.4^^,
7.82% BA.2,
5.22% BA.5.1^^,
2.54% unassigned and
1.18% BA.2.9

**S:L452Q; ^^S:L452R/F486V

Tracker: tinyurl.com/mryj4uu7
#OmicronUpdates 6/28/22 Image
#OmicronVariantUpdates #UnitedStates 06/28/22

Top 5 lineages:
BA.2.12.1, ⬇️ (Spike: L452Q)
BA.5, ⬆️ (Spike: L452R)
BA.4 ⬆️ (Spike: L452R)
BA.2 ⬇️
BA.5.1 ⬆️👀 (Lineage prevalent in #Portugal)

* includes recently designated BA.2.x.y and undesignated BA.2s Image
BA.5*/BA.4* hotspots - #UnitedStates #15DayTrends

All eyes on #NewYork! ImageImage
Read 12 tweets
#COVID19 #VariantDashboard - #UnitedStates

TOP lineages (15-DAY TRENDS):

46.66% BA.2.12.1**,
23.33% BA.5^^,
12.15% BA.4^^,
7.64% BA.2,
4.24% BA.5.1^^,
1.29% BA.2.9 and
1.17% unassigned

**S:L452Q; ^^S:L452R/F486V

Tracker: tinyurl.com/mryj4uu7
#OmicronUpdates 6/27/22
#OmicronVariantUpdates #UnitedStates 06/27/22

Top 5 lineages:
BA.2.12.1, ⬇️ (Spike: L452Q)
BA.5, ⬆️ (Spike: L452R)
BA.4 ⬆️ (Spike: L452R)
BA.2 ⬇️
BA.5.1 ⬆️👀 (Lineage prevalent in #Portugal)

* includes recently designated BA.2.x.y and undesignated BA.2s
#SARSCoV2 lineages in USA (#15DayTrends)

Circulating #BA5*/#BA4* sub-lineages:
BA.5, BA.4.1, BA.5.2.1, BA.5.1, BA.4, BA.5.2, BA.5.3.1, BE.1, BF.1, BA.5.3

Assignments via: #Nextclade #PANGO - clades.nextclade.org
Read 13 tweets
#COVID19 #VariantDashboard - #UnitedStates

TOP lineages (15-DAY TRENDS):

50.65% BA.2.12.1**,
19.90% BA.5^^,
10.46% BA.4^^,
9.83% BA.2,
3.30% BA.5.1^^,
1.21% BA.2.3 and
1.09% BA.2.9

**S:L452Q; ^^S:L452R/F486V

Tracker: tinyurl.com/mryj4uu7
#OmicronUpdates 06/26/22
#OmicronVariantUpdates #UnitedStates 06/26/22

Top 5 lineages:
BA.2.12.1, ⬆️ (Spike: L452Q)
BA.5, ⬆️ (Spike: L452R)
BA.4 ⬆️ (Spike: L452R)
BA.2 ⬇️
BA.5.1 ⬆️👀 (Lineage prevalent in #Portugal)

* includes recently designated BA.2.x.y and undesignated BA.2s
#SARSCoV2 lineages in USA (#15DayTrends)

Circulating #BA5*/#BA4* sublineages:
BA.5, BA.4.1, BA.5.2.1, BA.5.1, BA.4, BA.5.3.1, BA.5.2, BE.1, BA.5.3, BF.1
Read 14 tweets
#COVID19 #VariantDashboard - #UnitedStates

TOP lineages (15-DAY TRENDS):

47.60% BA.2.12.1**
22.33% BA.5^^
11.44% BA.2,
10.48% BA.4^^
3.61% BA.2.12,
1.08% BA.2.9 and
1.05% BA.2.3

**S:L452Q; ^^S:L452R/F486V

Tracker: tinyurl.com/mryj4uu7
#OmicronUpdates 06/25/22 Image
#OmicronVariantUpdates #UnitedStates 06/25/22

Top 5 lineages:
BA.2.12.1, ↔️ (Spike: L452Q)
BA.5, ⬆️ (Spike: L452R)
BA.2 ⬇️
BA.4 ⬆️ (Spike: L452R)
BA.2.12

* includes recently designated BA.2.x.y and undesignated BA.2s Image
Read 12 tweets
#COVID19 #VariantDashboard - #UnitedStates

TOP lineages (15-DAY TRENDS):

46.33% BA.2.12.1**,
17.07% BA.5^^,
15.30% BA.2,
9.02% BA.4^^,
5.80% BA.2.12,
1.75% BA.2.3 and
1.21% BA.2.9

**S:L452Q; ^^S:L452R/F486V

Tracker: tinyurl.com/mryj4uu7
#OmicronUpdates 06/23/22 Image
#OmicronVariantUpdates #UnitedStates 06/23/22

Top 5 lineages:
BA.2.12.1, ⬇️ (Spike: L452Q)
BA.5, ⬆️ (Spike: L452R)
BA.2 ⬇️
BA.4 ⬆️ (Spike: L452R)
BA.2.12

* includes recently designated BA.2.x.y and undesignated BA.2s Image
Read 12 tweets
#COVID19 #VariantDashboard - #UnitedStates

TOP lineages (15-DAY TRENDS):

57.01% BA.2.12.1**,
22.06% BA.2,
4.07% BA.5^^,
3.19% BA.2.12,
3.06% BA.4^^,
2.73% BA.2.9 and
2.65% BA.2.3

**S:L452Q; ^^S:L452R/F486V

Tracker: tinyurl.com/mryj4uu7
#OmicronUpdates 06/07/22
#OmicronVariantUpdates #UnitedStates 06/07/22

Top circulating lineages: BA.2.12.1, BA.2*, BA.5, BA.2.12, BA.4, BA.2.9, BA.2.3

Proportion of BA.5/BA.4 is increasing

* includes recently designated BA.2.x.y
BA.2.12.1 hotspots - #UnitedStates (#15DayTrends)

Top 5 Hotspots: #NewYork, #Florida, #Texas, #California, #Arizona
Read 12 tweets
#COVID19 #VariantDashboard - #UnitedStates

TOP lineages (15-DAY TRENDS):

58.39% BA.2.12.1**,
21.76% BA.2,
3.88% BA.5^^,
3.14% BA.2.9,
2.97% BA.2.3,
2.95% BA.4^^ and
2.73% BA.2.12

**S:L452Q; ^^S:L452R/F486V

Tracker: tinyurl.com/mryj4uu7
#OmicronUpdates 06/06/22
#OmicronVariantUpdates #UnitedStates 06/06/22

Top circulating lineages: BA.2.12.1, BA.2*, BA.5, BA.2.9, BA.2.3, BA.4 and BA.2.12

Proportion of BA.5/BA.4 is increasing

* includes recently designated BA.2.x.y
BA.2.12.1 hotspots - #UnitedStates (#15DayTrends)

Top 5 Hotspots: #NewYork, #Florida, #California, #Arizona, #Pennsylvania
Read 10 tweets
#COVID19 #VariantDashboard - #UnitedStates

TOP lineages (15-DAY TRENDS):

56.27% BA.2.12.1**,
22.94% BA.2,
3.74% BA.5^^,
3.69% BA.2.3,
3.50% BA.2.12,
2.92% BA.4^^ and
2.72% BA.2.9

**S:L452Q; ^^S:L452R/F486V

Tracker: tinyurl.com/mryj4uu7

#OmicronUpdates 06/05/22
#OmicronVariantUpdates #UnitedStates 06/05/22

Top circulating lineages: BA.2.12.1, BA.2*, BA.5, BA.2.3, BA.2.12, BA.4 and BA.2.9

Proportion of BA.5/BA.4 is increasing

* includes recently designated BA.2.x.y
Read 11 tweets
#COVID19 #VariantDashboard - #UnitedStates

TOP lineages (15-DAY TRENDS):

55.63% BA.2.12.1**,
23.43% BA.2,
4.02% BA.2.12,
3.88% BA.2.3,
3.44% BA.5^^,
2.89% BA.2.9, and
2.58% BA.4^^

**S:L452Q; ^^S:L452R/F486V

Tracker: tinyurl.com/mryj4uu7
#OmicronUpdates 06/04/22 Image
#OmicronVariantUpdates #UnitedStates 06/04/22

Top circulating lineages: BA.2.12.1, BA.2*, BA.2.12, BA.2.3,, BA.5 BA.2.9, and BA.4

Proportion of BA.5/BA.4 is increasing

* includes recently designated BA.2.x.y Image
BA.2.12.1 hotspots - #UnitedStates (#15DayTrends) Image
Read 10 tweets
#COVID19 #VariantDashboard - #UnitedStates

TOP lineages (15-DAY TRENDS):

55.27% BA.2.12.1**,
24.07% BA.2,
3.90% BA.2.12,
3.90% BA.2.3,
3.23% BA.2.9,
3.10% BA.5^^ and
2.51% BA.4^^

**S:L452Q; ^^S:L452R/F486V

Tracker: tinyurl.com/mryj4uu7
#OmicronUpdates 06/03/22 Image
#OmicronVariantUpdates #UnitedStates 06/03/22

Top circulating lineages: BA.2.12.1, BA.2*, BA.2.12, BA.2.3, BA.2.9, BA.5 and BA.4

Proportion of BA.5/BA.4 is increasing

* includes recently designated BA.2.x.y Image
BA.2.12.1 hotspots - #UnitedStates (#15DayTrends) Image
Read 7 tweets

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