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Congrats Nick github.com/Nick-Eagles for your @biorxivpreprint first pre-print! 🙌🏽
SPEAQeasy is our @nextflowio implementation of the #RNAseq processing pipeline that produces @Bioconductor-friendly #rstats objects that we use at @LieberInstitute
📜 biorxiv.org/content/10.110…
SPEAQeasy is our @nextflowio implementation of the #RNAseq processing pipeline that produces @Bioconductor-friendly #rstats objects that we use at @LieberInstitute
📜 biorxiv.org/content/10.110…
This project started a few years ago with Emily Burke linkedin.com/in/emilyeburke/ @BadoiPhan @andrewejaffe with whom we wrote a version specific to our HPC 🖥️ (JHPCE)
github.com/LieberInstitut…
Then @Jake_Aaron96 Israel Aguilar et al from @wintergenomics rewrote using it @nextflowio
github.com/LieberInstitut…
Then @Jake_Aaron96 Israel Aguilar et al from @wintergenomics rewrote using it @nextflowio
Nick continued developing it with input from @sudo_BreeB and tests from colleagues
Nick also wrote the documentation website research.libd.org/SPEAQeasy/
Then @JoshStolz2 @lahuuki helped show the outputs can be analyzed with @Bioconductor
research.libd.org/SPEAQeasy-exam…
Nick also wrote the documentation website research.libd.org/SPEAQeasy/
Then @JoshStolz2 @lahuuki helped show the outputs can be analyzed with @Bioconductor
research.libd.org/SPEAQeasy-exam…
