Discover and read the best of Twitter Threads about #LineageWatchTeam
Most recents (16)
#COVID19 #VariantDashboard - #UnitedStates
TOP lineages (15-DAY TRENDS):
17.0% BA.5.2.1
10.8% BA.5.2
10.7% BA.4.6
6.9% BA.5.1
2.7% BF.7
2.6% BF.10
2.5% BA.5.5
2.2% BQ.1
2.1% BA.5.6
2.1% BF.5
Tracker: tinyurl.com/mryj4uu7
#OmicronUpdates 10/20/22
1/n
TOP lineages (15-DAY TRENDS):
17.0% BA.5.2.1
10.8% BA.5.2
10.7% BA.4.6
6.9% BA.5.1
2.7% BF.7
2.6% BF.10
2.5% BA.5.5
2.2% BQ.1
2.1% BA.5.6
2.1% BF.5
Tracker: tinyurl.com/mryj4uu7
#OmicronUpdates 10/20/22
1/n
Sequence count by US State
Share of sequences with sample collection dates in the last 15 days.
2/n
Share of sequences with sample collection dates in the last 15 days.
2/n
15 of the 2729 sequences are from opt-in voluntary airport screening with sample collections dates in the last 15 days
3 BQ.1.1 (NY, GA, CA)
1 BQ.1 (CA)
#MaskUp in✈️🛳️🚍🚉etc
3/n
3 BQ.1.1 (NY, GA, CA)
1 BQ.1 (CA)
#MaskUp in✈️🛳️🚍🚉etc
3/n
#COVID19 #VariantDashboard - #UnitedStates
TOP lineages (15-DAY TRENDS):
17.1% BA.5.2.1
10.5% BA.5.2
10.3% BA.4.6
7.0% BA.5.1
2.6% BA.5.5
2.6% BF.10
2.5% BF.7
2.4% BQ.1.1
2.1% BQ.1
2.1% BF.5
Tracker: tinyurl.com/mryj4uu7
#OmicronUpdates 10/19/22
1/n
TOP lineages (15-DAY TRENDS):
17.1% BA.5.2.1
10.5% BA.5.2
10.3% BA.4.6
7.0% BA.5.1
2.6% BA.5.5
2.6% BF.10
2.5% BF.7
2.4% BQ.1.1
2.1% BQ.1
2.1% BF.5
Tracker: tinyurl.com/mryj4uu7
#OmicronUpdates 10/19/22
1/n
Sequence count by US State
Share of sequences with sample collection dates in the last 15 days.
2/n
Share of sequences with sample collection dates in the last 15 days.
2/n
21 of the 3203 sequences are from opt-in voluntary airport screening with sample collections dates in the last 15 days
3 BQ.1.1 (NY, GA, CA)
2 BQ.1 (NY, CA)
2 BM.1.1 (NJ)
#MaskUp in✈️🛳️🚍🚉etc
3/n
3 BQ.1.1 (NY, GA, CA)
2 BQ.1 (NY, CA)
2 BM.1.1 (NJ)
#MaskUp in✈️🛳️🚍🚉etc
3/n
#COVID19 #VariantDashboard - #UnitedStates
TOP lineages (15-DAY TRENDS):
17.4% BA.5.2.1
11.2% BA.5.2
10.1% BA.4.6
6.8% BA.5.1
2.9% BF.10
2.5% BF.7
2.4% BQ.1.1
2.3% BQ.1
2.2% BA.5.5
1.9% BF.26
Tracker: tinyurl.com/mryj4uu7
#OmicronUpdates 10/18/22
1/n
TOP lineages (15-DAY TRENDS):
17.4% BA.5.2.1
11.2% BA.5.2
10.1% BA.4.6
6.8% BA.5.1
2.9% BF.10
2.5% BF.7
2.4% BQ.1.1
2.3% BQ.1
2.2% BA.5.5
1.9% BF.26
Tracker: tinyurl.com/mryj4uu7
#OmicronUpdates 10/18/22
1/n
Sequence count by US State
Share of sequences with sample collection dates in the last 15 days.
2/n
Share of sequences with sample collection dates in the last 15 days.
2/n
7 of the 3263 sequences are from opt-in voluntary airport screening with sample collections dates in the last 15 days
1 BQ.1 (NY)
1 BM.1.1 (NJ)
#MaskUp in✈️🛳️🚍🚉etc
3/n
1 BQ.1 (NY)
1 BM.1.1 (NJ)
#MaskUp in✈️🛳️🚍🚉etc
3/n
#COVID19 #VariantDashboard - #UnitedStates
TOP lineages (15-DAY TRENDS):
19.0% BA.5.2.1
14.4% BA.5.2
11.8% BA.4.6
9.2% BA.5.1
3.9% BQ.1👀
3.0% BA.5
2.9% BF.7
2.6% BF.10
2.5% BQ.1.1👀
Tracker: tinyurl.com/mryj4uu7
#OmicronUpdates 10/12/22
1/n
TOP lineages (15-DAY TRENDS):
19.0% BA.5.2.1
14.4% BA.5.2
11.8% BA.4.6
9.2% BA.5.1
3.9% BQ.1👀
3.0% BA.5
2.9% BF.7
2.6% BF.10
2.5% BQ.1.1👀
Tracker: tinyurl.com/mryj4uu7
#OmicronUpdates 10/12/22
1/n
Sequence count by US State
#NewYork has uploaded a lion's share of sequences with sample collection dates in the last 15 days.
2/n
#NewYork has uploaded a lion's share of sequences with sample collection dates in the last 15 days.
2/n
32 of the 1820 sequences are from opt-in voluntary airport screening with sample collections dates in the last 15 days
4 BQ.1.1 (3-NY, 1-CA airport)
1 BQ.1 (NY)
1 BN.1 (CA)
1 BM.1.1 (NJ)
1 BA.2.75.2 (NJ)
#MaskUp in✈️🛳️🚍🚉etc
3/n
4 BQ.1.1 (3-NY, 1-CA airport)
1 BQ.1 (NY)
1 BN.1 (CA)
1 BM.1.1 (NJ)
1 BA.2.75.2 (NJ)
#MaskUp in✈️🛳️🚍🚉etc
3/n
#COVID19 #VariantDashboard - #UnitedStates
TOP lineages (15-DAY TRENDS):
17.0% BA.5.2.1
15.1% BA.5.2
12.5% BA.4.6
9.0% BA.5.1
3.6% BQ.1👀
2.9% BA.5
2.7% BF.10
2.6% BA.5.6
2.3% BF.7
2.0% BF.5.2.9
Tracker: tinyurl.com/mryj4uu7
#OmicronUpdates 10/11/22
1/n
TOP lineages (15-DAY TRENDS):
17.0% BA.5.2.1
15.1% BA.5.2
12.5% BA.4.6
9.0% BA.5.1
3.6% BQ.1👀
2.9% BA.5
2.7% BF.10
2.6% BA.5.6
2.3% BF.7
2.0% BF.5.2.9
Tracker: tinyurl.com/mryj4uu7
#OmicronUpdates 10/11/22
1/n
Sequence count by US State
#NewYork has uploaded a lion's share of sequences with sample collection dates in the last 15 days.
2/n
#NewYork has uploaded a lion's share of sequences with sample collection dates in the last 15 days.
2/n
29 of the 2626 sequences are from opt-in airport screening with sample collections dates in the last 15 days
3 BQ.1.1 (2-NY, 1-CA airport)
1 XBB (CA)
1 BA.2.3.20 (GA)
1 BN.1 (CA)
1 BY.1 (NJ)
1 BA.2.75.2 (NJ)
#MaskUp in✈️🛳️🚍🚉etc
3/n
3 BQ.1.1 (2-NY, 1-CA airport)
1 XBB (CA)
1 BA.2.3.20 (GA)
1 BN.1 (CA)
1 BY.1 (NJ)
1 BA.2.75.2 (NJ)
#MaskUp in✈️🛳️🚍🚉etc
3/n
#COVID19 #VariantDashboard - #UnitedStates
TOP lineages (15-DAY TRENDS):
18.7% BA.5.2.1
14.3% BA.4.6⬆️
13.1% BA.5.2
8.8% BA.5.1
4.1% BQ.1👀
3.1% BF.7
2.7% BA.5.6
2.3% BQ.1.1👀
2.2% BF.10
Tracker: tinyurl.com/mryj4uu7
#OmicronUpdates 10/10/22
1/n
TOP lineages (15-DAY TRENDS):
18.7% BA.5.2.1
14.3% BA.4.6⬆️
13.1% BA.5.2
8.8% BA.5.1
4.1% BQ.1👀
3.1% BF.7
2.7% BA.5.6
2.3% BQ.1.1👀
2.2% BF.10
Tracker: tinyurl.com/mryj4uu7
#OmicronUpdates 10/10/22
1/n
Sequence count by US State
#NewYork has uploaded a lion's share of sequences with sample collection dates in the last 15 days.
2/n
#NewYork has uploaded a lion's share of sequences with sample collection dates in the last 15 days.
2/n
37 of the 2144 sequences are from opt-in airport screening with sample collections dates in the last 15 days
3 BQ.1.1 (2-NY, 1-CA airport)
2 XBB (NJ, CA)
1 BA.2.3.20 (GA)
1 BN.1 (CA)
1 BY.1 (NJ)
1 BM.1.1.1 (NJ)
1 BA.2.75.2 (NJ)
#MaskUp in✈️🛳️🚍🚉etc
3/n
3 BQ.1.1 (2-NY, 1-CA airport)
2 XBB (NJ, CA)
1 BA.2.3.20 (GA)
1 BN.1 (CA)
1 BY.1 (NJ)
1 BM.1.1.1 (NJ)
1 BA.2.75.2 (NJ)
#MaskUp in✈️🛳️🚍🚉etc
3/n
#COVID19 #VariantDashboard - #UnitedStates
TOP lineages (15-DAY TRENDS):
20.0% BA.5.2.1
12.7% BA.5.2
12.7% BA.4.6
8.6% BA.5.1
4.8% BQ.1👀
3.6% BF.7
2.6% BQ.1.1👀
2.1% BA.5.6
2.1% BF.10
1.8% BA.5
Tracker: tinyurl.com/mryj4uu7
#OmicronUpdates 10/09/22
1/n
TOP lineages (15-DAY TRENDS):
20.0% BA.5.2.1
12.7% BA.5.2
12.7% BA.4.6
8.6% BA.5.1
4.8% BQ.1👀
3.6% BF.7
2.6% BQ.1.1👀
2.1% BA.5.6
2.1% BF.10
1.8% BA.5
Tracker: tinyurl.com/mryj4uu7
#OmicronUpdates 10/09/22
1/n
Charts represent #15DayTrends
~50% of sequences are from #NewYorkCity!
919 sequences out of 1825 total sequences uploaded in @GISAID from #USA with sample collection dates in the last 15 days!
2/n
~50% of sequences are from #NewYorkCity!
919 sequences out of 1825 total sequences uploaded in @GISAID from #USA with sample collection dates in the last 15 days!
2/n
44 of the 1825 sequences are from opt-in airport screening
Mostly Asymptomatic
5 BQ.1.1 (2-NJ, 2-NY, 1-CA)
2 XBB (NJ, CA airport)
1 BA.2.3.20 (GA)
1 BN.1 (CA)
1 BY.1 (NJ)
1 BM.1.1.1 (NJ)
1 BA.2.75.2 (NJ)
Time to bring back Universal Masking in the Transportation Sector!
3/n
Mostly Asymptomatic
5 BQ.1.1 (2-NJ, 2-NY, 1-CA)
2 XBB (NJ, CA airport)
1 BA.2.3.20 (GA)
1 BN.1 (CA)
1 BY.1 (NJ)
1 BM.1.1.1 (NJ)
1 BA.2.75.2 (NJ)
Time to bring back Universal Masking in the Transportation Sector!
3/n
#COVID19 #VariantDashboard - #UnitedStates
TOP lineages (15-DAY TRENDS):
23.3% BA.5.2.1
14.7% BA.5.2
13.0% BA.4.6
8.9% BA.5.1
2.8% BF.10
2.4% BA.5.5
2.4% BA.5.6
2.3% BF.7
2.1% BA.5.2.9
1.6% BA.5
Tracker: tinyurl.com/mryj4uu7
#OmicronUpdates 10/08/22
1/n
TOP lineages (15-DAY TRENDS):
23.3% BA.5.2.1
14.7% BA.5.2
13.0% BA.4.6
8.9% BA.5.1
2.8% BF.10
2.4% BA.5.5
2.4% BA.5.6
2.3% BF.7
2.1% BA.5.2.9
1.6% BA.5
Tracker: tinyurl.com/mryj4uu7
#OmicronUpdates 10/08/22
1/n
Top circulating lineages (#15DayTrends)
78.6% BA.5*
13.0% BA.4.6*
2.3% BF.7*
1.7% BA.4*
1.3% BA.2.75*
1.3% BQ.1*
1.1% BQ.1.1*
0.2% XBB*
0.1% BA.2.3.30*
2/n
78.6% BA.5*
13.0% BA.4.6*
2.3% BF.7*
1.7% BA.4*
1.3% BA.2.75*
1.3% BQ.1*
1.1% BQ.1.1*
0.2% XBB*
0.1% BA.2.3.30*
2/n
#COVID19 #VariantDashboard - #UnitedStates
TOP lineages (15-DAY TRENDS):
18.5% BA.5.2.1
15.4% BA.5.2
12.0% BA.4.6
10.3% BA.5.1
3.6% BF.10
3.2% BA.5.5
2.6% BA.5.2.9
2.6% BA.5.6
2.0% BA.5
2.0% BF.7
Tracker: tinyurl.com/mryj4uu7
#OmicronUpdates 10/06/22
1/n
TOP lineages (15-DAY TRENDS):
18.5% BA.5.2.1
15.4% BA.5.2
12.0% BA.4.6
10.3% BA.5.1
3.6% BF.10
3.2% BA.5.5
2.6% BA.5.2.9
2.6% BA.5.6
2.0% BA.5
2.0% BF.7
Tracker: tinyurl.com/mryj4uu7
#OmicronUpdates 10/06/22
1/n
Top circulating lineages (#15DayTrends)
80% BA.5*
12% BA.4.6*
2% BF.7*
1.5% BA.4*
1.3% BA.2.75*
1.1% BQ.1*
0.9% BQ.1.1*
0.3% BA.2.3.30*
0.1% XBB*
2/n
80% BA.5*
12% BA.4.6*
2% BF.7*
1.5% BA.4*
1.3% BA.2.75*
1.1% BQ.1*
0.9% BQ.1.1*
0.3% BA.2.3.30*
0.1% XBB*
2/n
#COVID19 #VariantDashboard - #UnitedStates
TOP lineages (15-DAY TRENDS):
20.4% BA.5.2.1
13.4% BA.5.2
12.7% BA.4.6
9.9% BA.5.1
3.8% BF.10
3.5% BA.5.5
2.8% BA.5.6
2.7% BA.5.2.9
1.9% BF.7
1.9% BA.5
Tracker: tinyurl.com/mryj4uu7
#OmicronUpdates 10/05/22
1/n
TOP lineages (15-DAY TRENDS):
20.4% BA.5.2.1
13.4% BA.5.2
12.7% BA.4.6
9.9% BA.5.1
3.8% BF.10
3.5% BA.5.5
2.8% BA.5.6
2.7% BA.5.2.9
1.9% BF.7
1.9% BA.5
Tracker: tinyurl.com/mryj4uu7
#OmicronUpdates 10/05/22
1/n
Top circulating lineages (#15DayTrends)
79.6% BA.5*
12.72% BA.4.6*
1.94% BF.7*
1.59% BA.4*
1.22% BA.2.75*
1.16% BQ.1*
0.78% BQ.1.1*
0.32% BA.2.3.30*
0.12% XBB*
2/n
79.6% BA.5*
12.72% BA.4.6*
1.94% BF.7*
1.59% BA.4*
1.22% BA.2.75*
1.16% BQ.1*
0.78% BQ.1.1*
0.32% BA.2.3.30*
0.12% XBB*
2/n
#COVID19 #VariantDashboard - #UnitedStates
TOP lineages (15-DAY TRENDS):
22.0% BA.5.2.1
13.6% BA.5.2
11.0% BA.4.6
9.9% BA.5.1
3.7% BF.10
3.5% BA.5.5
3.0% BA.5.6
2.4% BA.5.2.9
2.1% BF.7
2.0% BA.5
Tracker: tinyurl.com/mryj4uu7
#OmicronUpdates 10/04/22
1/n
TOP lineages (15-DAY TRENDS):
22.0% BA.5.2.1
13.6% BA.5.2
11.0% BA.4.6
9.9% BA.5.1
3.7% BF.10
3.5% BA.5.5
3.0% BA.5.6
2.4% BA.5.2.9
2.1% BF.7
2.0% BA.5
Tracker: tinyurl.com/mryj4uu7
#OmicronUpdates 10/04/22
1/n
Top circulating lineages (#15DayTrends)
81.6% BA.5*
11% BA.4.6*
2.1% BF.7*
1.2% BA.2.75*
1.5% BA.4*
1.2% BQ.1*
0.5% BQ.1.1*
0.3% BA.2.3.30*
0.04% XBB*
2/n
81.6% BA.5*
11% BA.4.6*
2.1% BF.7*
1.2% BA.2.75*
1.5% BA.4*
1.2% BQ.1*
0.5% BQ.1.1*
0.3% BA.2.3.30*
0.04% XBB*
2/n
#COVID19 #VariantDashboard - #UnitedStates
TOP lineages (15-DAY TRENDS):
21.4% BA.5.2.1
13.6% BA.5.2
10.9% BA.4.6
9.9% BA.5.1
3.9% BF.10
3.5% BA.5.5
3.0% BA.5.6
2.2% BF.7
2.2% BA.5.2.9
1.8% BA.5
Tracker: tinyurl.com/mryj4uu7
#OmicronUpdates 10/03/22
1/n
TOP lineages (15-DAY TRENDS):
21.4% BA.5.2.1
13.6% BA.5.2
10.9% BA.4.6
9.9% BA.5.1
3.9% BF.10
3.5% BA.5.5
3.0% BA.5.6
2.2% BF.7
2.2% BA.5.2.9
1.8% BA.5
Tracker: tinyurl.com/mryj4uu7
#OmicronUpdates 10/03/22
1/n
Top circulating lineages (#15DayTrends)
81.7% BA.5*
10.9% BA.4.6*
2.2% BF.7*
1.5% BA.2.75*
1.4% BA.4*
1.4% BQ.1*
0.5% BQ.1.1*
0.2% BA.2.3.30*
0.02% XBB*
2/n
81.7% BA.5*
10.9% BA.4.6*
2.2% BF.7*
1.5% BA.2.75*
1.4% BA.4*
1.4% BQ.1*
0.5% BQ.1.1*
0.2% BA.2.3.30*
0.02% XBB*
2/n
#COVID19 #VariantDashboard - #UnitedStates
TOP lineages (15-DAY TRENDS):
23.2% BA.5.2.1
13.5% BA.5.2
10.6% BA.5.1
10.0% BA.4.6
4.0% BF.10
3.3% BA.5.5
2.8% BA.5.6
2.4% BA.5.2.9
2.2% BF.7
2.0% BA.5
Tracker: tinyurl.com/mryj4uu7
#OmicronUpdates 10/02/22
1/n
TOP lineages (15-DAY TRENDS):
23.2% BA.5.2.1
13.5% BA.5.2
10.6% BA.5.1
10.0% BA.4.6
4.0% BF.10
3.3% BA.5.5
2.8% BA.5.6
2.4% BA.5.2.9
2.2% BF.7
2.0% BA.5
Tracker: tinyurl.com/mryj4uu7
#OmicronUpdates 10/02/22
1/n
Top circulating lineages (#15DayTrends)
83.7%BA.5*
10% BA.4.6*
2.2%BF.7*
1.5%BA.4*
1.2%BA.2.75*
0.5%BQ.1*
0.3%BA.2.3.30*
0.4%BQ.1.1*
2/n
83.7%BA.5*
10% BA.4.6*
2.2%BF.7*
1.5%BA.4*
1.2%BA.2.75*
0.5%BQ.1*
0.3%BA.2.3.30*
0.4%BQ.1.1*
2/n
#COVID19 #VariantDashboard - #UnitedStates
TOP lineages (15-DAY TRENDS):
22.18% BA.5.2.1
12.64% BA.5.2
10.88% BA.4.6
10.02% BA.5.1
4.19% BA.5
3.63% BA.5.5
3.23% BA.5.6
3.04% BF.10
2.32% BA.5.2.9
Tracker: tinyurl.com/mryj4uu7
#OmicronUpdates 09/27/22
1/n
TOP lineages (15-DAY TRENDS):
22.18% BA.5.2.1
12.64% BA.5.2
10.88% BA.4.6
10.02% BA.5.1
4.19% BA.5
3.63% BA.5.5
3.23% BA.5.6
3.04% BF.10
2.32% BA.5.2.9
Tracker: tinyurl.com/mryj4uu7
#OmicronUpdates 09/27/22
1/n
Top circulating lineages:
82.4% BA.5*
10.9% BA.4.6*
2.7% BA.4*
1.4% BF.7*
0.8% BA.2.75*
0.7% BQ.1* 👀
0.2% BQ.1.1*👀
0.3% BA.2.75.2*
0.05% BA.2.3.20*
0.02% BJ.1*
2/n
82.4% BA.5*
10.9% BA.4.6*
2.7% BA.4*
1.4% BF.7*
0.8% BA.2.75*
0.7% BQ.1* 👀
0.2% BQ.1.1*👀
0.3% BA.2.75.2*
0.05% BA.2.3.20*
0.02% BJ.1*
2/n
#COVID19 #VariantDashboard - #UnitedStates
TOP lineages (15-DAY TRENDS):
22.33% BA.5.2.1
12.87% BA.5.2
10.53% BA.4.6
10.33% BA.5.1
3.71% BA.5
3.69% BA.5.5
3.43% BA.5.6
3.11% BF.10
2.67% BA.5.2.9
1.59% BF.5
Tracker: tinyurl.com/mryj4uu7
#OmicronUpdates 09/26/22
1/n
TOP lineages (15-DAY TRENDS):
22.33% BA.5.2.1
12.87% BA.5.2
10.53% BA.4.6
10.33% BA.5.1
3.71% BA.5
3.69% BA.5.5
3.43% BA.5.6
3.11% BF.10
2.67% BA.5.2.9
1.59% BF.5
Tracker: tinyurl.com/mryj4uu7
#OmicronUpdates 09/26/22
1/n
Top circulating lineages:
82.62% BA.5*
10.53% BA.4.6*
2.68% BA.4*
1.45% BF.7*
0.94% BA.2.75*
0.62% BQ.1* 👀
0.20% BQ.1.1*👀
0.25% BA.2.75.2*
0.05% BA.2.3.20*
0.03% BJ.1*
2/n
82.62% BA.5*
10.53% BA.4.6*
2.68% BA.4*
1.45% BF.7*
0.94% BA.2.75*
0.62% BQ.1* 👀
0.20% BQ.1.1*👀
0.25% BA.2.75.2*
0.05% BA.2.3.20*
0.03% BJ.1*
2/n
#COVID19 #VariantDashboard - #UnitedStates
TOP lineages (15-DAY TRENDS):
21.86% BA.5.2.1
12.79% BA.5.2
11.39% BA.4.6⬆️
10.89% BA.5.1
3.83% BA.5
3.55% BA.5.5
3.13% BA.5.6
3.02% BF.10
2.55% BA.5.2.9
1.59% BF.5
Tracker: tinyurl.com/mryj4uu7
#OmicronUpdates 09/25/22
1/n
TOP lineages (15-DAY TRENDS):
21.86% BA.5.2.1
12.79% BA.5.2
11.39% BA.4.6⬆️
10.89% BA.5.1
3.83% BA.5
3.55% BA.5.5
3.13% BA.5.6
3.02% BF.10
2.55% BA.5.2.9
1.59% BF.5
Tracker: tinyurl.com/mryj4uu7
#OmicronUpdates 09/25/22
1/n
Top circulating lineages:
82.23% BA.5*
11.39% BA.4.6*
2.35% BA.4*
1.37% BF.7*
1.04% BA.2.75*
0.67% BQ.1* 👀
0.21% BQ.1.1*👀
0.18% BA.2.75.2*
0.05% BA.2.3.20*
0.05% BJ.1*
2/n
82.23% BA.5*
11.39% BA.4.6*
2.35% BA.4*
1.37% BF.7*
1.04% BA.2.75*
0.67% BQ.1* 👀
0.21% BQ.1.1*👀
0.18% BA.2.75.2*
0.05% BA.2.3.20*
0.05% BJ.1*
2/n
BA.5* group of lineages have outcompeted all other circulating lineages in the USA.
@CDCgov updated variant proportions estimates on 9/23/2022
3/n
@CDCgov updated variant proportions estimates on 9/23/2022
3/n
