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This #EOSS funding from @cziscience for #DESeq2 and #tximeta wrapped up at the end of 2021.

Reporting in this ๐Ÿงต on what we developed:
1. @kwame_forbes wrote DESeq2::integrateWithSingleCell() which helps user locate publicly available SC datasets followed by visualization with his own R package:

kwameforbes.github.io/vizWithSCE/

Kwame was then a @UNCPREP scholar, now a first year BCB student at UNC ๐Ÿงฌ๐Ÿ’ป๐ŸŽ‰ Image
2. Some Bioc folks and a team at UNC worked on extending the tximeta + DESeq2 + plyranges workflow that @_StuartLee @lawremi and I started in the fluentGenomics paper:

sa-lee.github.io/fluentGenomics/ Image
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