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Just released another #Python package for #bioinformatics: #Cython bindings to FAMSA, a very fast algorithm for #MultipleSequenceAlignment by @sdeorowicz, Agnieszka Debudaj-Grabysz and @AdamGudys! Get it here: github.com/althonos/pyfam…
Just create an Aligner object (with additional configuration if you want), then give it some sequences to align: 
It's missing some small things that I'll add over time, but for now the key features are there, and you could use it in your Python or #snakemake workflows in place of the FAMSA binary.
