Discover and read the best of Twitter Threads about #pangenome
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Very pleased (& proud) that our meta-study of microbiome dynamics following #FMT is out today in @NatureMedicine
Congrats to @simone_s_li @BorkLab & collaborators @embl @amsterdamumc @WUR & CDD.
What happens after FMT? It's messy...
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nature.com/articles/s4159…
Congrats to @simone_s_li @BorkLab & collaborators @embl @amsterdamumc @WUR & CDD.
What happens after FMT? It's messy...
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nature.com/articles/s4159…
We started from the realisation that diff smaller studies on #FMT had come to v diff conclusions on microbiome dynamics. So we collected public and newly generated data from 316 FMTs across different indications and conducted a metagenomic meta-study.
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We built #pangenome|s from 47k newly generated MAGs and 25k ref genomes for a total of >1k species and profiled strain populations in each sample based on microbial Single Nucleotide Variants and gene presence/absence.
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