Ella Davyson Profile picture
2nd Year PhD Student at the CDT Biomedial AI programme at the University of Edinburgh. Research interests in the multi-omics of Major Depressive Disorder.

Apr 3, 2023, 8 tweets

Happy to share my 1st paper, in @BiologicalPsyc1! We investigated the links between 249 circulating metabolites & Major Depressive Disorder (MDD) in @uk_biobank. A thread šŸ§µ of our main findings:šŸ‘‡

Firstly, a Metabolome Wide Association Study (MetWAS) found that 129 (~ 52%) of metabolites were significantly associated with MDD.

We ran GWAS on all metabolites & found that 144 (57 %) shared a significant genetic correlation with MDD ranging from (āˆ’) 0.073 (omega-3 fatty acids to total fatty acids) to (+) 0.180 (phospholipids to total lipids in large high-density lipoprotein)

Using our GWAS findings & results from @PGCgenetics, Mendelian Randomisation found 5 measures potentially causally associated with #depression liability.

Genetic associations for an omega-3 fatty acid, docosahexaenoic Acid (DHA) colocalised with those for #depression at SNV rs2727271, an intronic variant for the fatty acid desaturase 2 (FADS2) gene.

Overall, these findings indicate a possible protective role for DHA in #depression

Read more: biologicalpsychiatryjournal.com/article/S0006-ā€¦
Coding scripts are available on Github (DOI: 10.5281/zenodo.7788316), and the metabolite GWASā€™ are being uploaded onto @GWASCatalog, which we hope will be a useful resource for others.

Finally, thank you to all my coauthors @ShenXueyi , @mja , @mcintosh2001 , @MarioniGroup , @elenabernabio and @RobertHillary, and of course to all the participants in the @ukbiobank!

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