Jon Deeks FMedSci Profile picture
Apr 17, 2021 19 tweets 3 min read Read on X
For the sake of clear Public Health messages, listening to this interview on @theJeremyVine I'm tweeting some responses to the claims made by Peto

#1 "the lateral flow test has the remarkable ability of only picking up people who are likely to be infectious, or other words a danger to others."
It doesn't just pick out ONLY infectious people
It doesn't pick out ALL infectious people
Linkage to infectiousness is unclear.

It can only gives +ve results when viral loads are high (a limitation not an ability). Studies show viable virus in many people with low viral loads.
#2 "So if you want to know where you are a danger to others the lateral flow test is quite good"
OK if it is positive (provided we are not on rock bottom prevalence).

But there is a danger this comment will have been heard as:

"If negative you are not a danger, which THEY DO NOT".
#3 "If you want to know whether what you had a week or two ago was Covid then the PCR test is good. "
REALLY? Can't believe that this comment was really meant to come out this way!

The PCR is brilliant at detecting live virus before and during infection. Anybody with symptoms must get one.

I seriously hope nobody takes this as a suggestion you shouldn't get tested ASAP.
#4 "VINE: It is looking for people who are exuding the virus right now, is that right?
PETO: Yes. It’s a here-and-now are you infectious today test. "
Please, lets calm down the claims about infectiousness. The evidence is not there.

It tells you if you have high levels of virus, because that is all it can do.

Viable virus is more common in those with high levels, but is still there in some which are missed (see #1)
#5 "We can’t wait five years to get all the results perfectly before we roll it out"
In the past months studies would have taken weeks not years.

The Bham Uni study of 7000 took 2 weeks, school studies could have been done as fast.

We ONLY have data on IFT in 78 symptom free people with Covid and no children

No excuse for not doing the studies we now need
#6 I think the people there are pessimists who are perpetually the enemy of the good, this is a good test, but it is not perfect, no test is perfect, no one is claiming that it is.
People want good enough studies,

not perfect studies,

but definitely not bad studies or no studies.
#7 "Ok if you are in a school or place of work there well be [inaudible] to protect others in schools or places of work and it might be quite helpful for everybody else to know people are tested before they go to work."
It is wrong to suggest the tests should make others feel safe.

This is false reassurance given the test misses more than 60% of cases in L'pool and 33% with high viral loads.

Plenty of outbreak studies now show how this is misleading and dangerous
#8 "if you are home alone and you are anxious to know whether you are infectious for whatever reason it is a really nice test to have to decide whether you are infectious or not and that will help you a lot."
I guess if it makes you feel better and you are going to stay at home, nobody will get hurt. Sort of placebo effect?

But again overstating claims about this test saying your ARE or ARE NOT infectious.

It CANNOT do this

Particularly the ARE NOT infectious bit.
@threadmaker unroll
The ‘remarkable ability’ is a bit like a secondhand car salesman telling you the fact the car doesn’t have any wheels is fantastic as it means you will never get a puncture. Promoting a failure as an ability.

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More from @deeksj

Jul 23, 2021
Daily Testing in school study report is out but presentation by BBC here is SPIN SPIN SPIN

The trial failed to show convincing reductions in school absence, and could not rule out large increases in Covid transmission. Sensitivity of the test was 53%.

bbc.co.uk/news/health-57…
The preprint for this study is here. Not yet peer reviewed.

modmedmicro.nsms.ox.ac.uk/wp-content/upl…
BBC says that reduced absence by 33%, but the ITT analysis in the text says 20% reduction with 95% confidence interval from 46% reduction to a 19% increases (p=0.27). So no convincing evidence of a reduction.
Read 12 tweets
Jul 18, 2021
SO what’s this POSITIVE news about medical tests?

Said it would be Monday, but actually the news broke this afternoon. So an early release from my tease …

Thanks for sharing your hopes about what it might be … I enjoyed many of them … but none were that close.

1/10
For me, positive news would be knowing

1) High quality tests are developed using the best expertise from industry and universities

2)Tests are evaluated in strong robust studies to work out whether they work in the real world for the purposes to which they are put

2/10
3) Study findings report the truth about whether they do more good than harm, and not spun for profit, popularity or reputation

4) Tests are developed to meet the greatest public health needs

5) Tests are affordable and available in the populations that need them most

3/10
Read 11 tweets
Jul 15, 2021
This new study suggests LFTs in primary care have sensitivity of 95% and specificity of 89%, but it is FLAWED.

These results are misleading because of PARTIAL VERIFICATION BIAS

A quick lesson ….

1/9
sciencedirect.com/science/articl…
Participants were first tested with LFTs – 810 positive and 1736 negative. The investigators choose to test 217 of the 1736 negatives with PCR – that’s 1 in 8. This wasn’t a random sample as they were influenced by clinical characteristics as well as the test result.

2/9
The sensitivity / specificity calculation is based on all LFT+ves and 12.5% of LFT-ves as follows:

3/9
Read 9 tweets
Jul 7, 2021
Even more data on LFTs out today.

@dhscgovuk released report of studies of Innova and Orient Gene, and their interpretation of findings.

Includes unpublished studies

BUT Clear evidence of post hoc interpretation of results based on naïve definition of infectiousness.

1/10
Long link is here:

gov.uk/government/pub…

2/10
@dhscgov define

HIGH viral load as >1,000,000 RNA/ml and appear to consider that these are the only cases which matter.

10,000 to 1,000,000 is LOW (not moderate)

<10,000 MINIMAL.

This is despite acknowledging there is no cut-off that categorises people as infectious

3/10
Read 11 tweets
Jun 22, 2021
Results from the LIVERPOOL EVENT PILOTS have been published on line and in the media. Somehow I missed these coming out. cultureliverpool.co.uk/event-research…

No official report from @dhscgov as per normal.
Seems important evidence is being delayed once again.

1/7
The bottom line is that the events were safe.

Kudos to Liverpool PH Team.

But detail is interesting to see why they were safe.

2/7
First the infection rate in Liverpool was very low when the events were held

Negative LFTs required for entry. 5/13263 positive and excluded. Same-day PCR found 4 people positive who had attended with false negative LFTs. So 5/9 were picked up by LFT – 44% missed.

3/7
Read 7 tweets
Jun 17, 2021
What do we known about ORIENT GENE used in the Daily Contact Testing Trial by the @educationgovuk and @DHSCgovuk?

There have been claims that this test is as good as others and has been reviewed by @MHRAgovuk for use in assisted testing. This is not right

1/10
The process does not make sense.

The MHRA never review products for assisted testing as they are professional use tests, which go through the self-certification process to get a CE-IVD mark.
MHRA doesn't go near this process.

2/n
In fact ORIENT GENE is not even on the MHRA register of products which is a requirement. You can check here - both for the product and manufacturer (sorry for the messy link).

3/n

aic.mhra.gov.uk/era/pdr.nsf/na…
Read 11 tweets

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