T01-Task 3: Create a chimera
For this use a promising low prevalence pathogenic spike and a more prevalent lower-risk backbone.
RaTG13 would be at the exact top of the list as it was known to have very likely killed 3 people in 2012.
T01-Task 4: Spice up the chimera
Basically insert an FCS and maybe try a few more tweaks to obtain chimeras with optimized recombinant SARS-CoV spike proteins:
3/ Did Peter Daszak tell you at the time about the Mojiang story and RaTG13, which would have clued you to the fact that RaTG13 would have been the perfect candidate spike for this work?
Or did he like Shi at the time just forget to give any detail about the mine and the deaths?
4/ What did you make of the double CGG arginine codon, especially if you already knew of the *unique* match to the ENaC, characterised at UNC?
How did you handle the fact that CGG-CGG is by far one of the least common ways to code RR in a virus, but the most common way in a lab?
5/ Did Peter tell you that RaTG13 was sequenced in 2017/18 in perfect synchronicity with the Deliverables under TA-01 Task 3 which was being written at the time?
6/ Or did he - like Shi Zhengli - pretend that RaTG13 was only sequenced in 2020 and that the tests of the miners samples were negative?
Both Shi's assertions were proven false, and both happen to be key deliverables under PI-01 Task 3.
7/ Did Peter give you access the the WIV sequences DB, so that you could try to match one to a backbone that could be used to create a chimera with the RaTG13 spike, as per DEFUSE work-plan?
Or did he also tell you that this would draw unwelcome attention?
8/ If Peter was fully transparent about all the points above, how on earth could you confidently exclude the possibility that SARS-CoV-2 was not tweaked in a lab?
And if he didn't, don't you think that you have just been telling porkies since then?
PS: Funny enough, even Chinese scientists from Shanghai looking at the natural evolution of FCS in coronaviruses could NOT exclude a lab construct in late 2020 - and they likely did not have all the information that Peter should have given you:
1/6 Why on earth did Gerald Keusch think he could write in these terms to @drsanjaygupta?
👉🏻 "do better to clarify and not further muddy the sewage left over from the behavior of the US gov. toward China"
That was just after the CNN interview of Dr. Redfield on 27 March 2021.
2/6 Dr. Gupta actually did not even say much at all. He was taken a bit aback during the interview.
Daszak and Keusch are just annoyed that CNN dared interview him.
3/6 The opening is mad:
"You totally missed the point with your comments about the origins of CoV-2. Whether or not the virus was even in the Wuhan Institute of Virology or there was an accidental release, CoV-2 originated as a spillover from bats and ultimately to humans."
Simon Wain-Hobson (Institut Pasteur) gave a talk to NIH officials last month.
He told them Collins and Fauci committed a "professional failure" by sterilizing debate on dangerous virus research.
He said Proximal Origin had "no data", and lab leak likely.
@thackerpd
André Lwoff Prize, Athena Prize from the French Academy of Sciences, Officier de la Légion d'Honneur, OBE (Order of the British Empire, 2022 list) for services to virology.
Wain-Hobson and his research group at Pasteur Institute were the first to publish the sequence of HIV.
One of the top virologists around.
Wain-Hobson called the 2011 Collins/Fauci/Nabel Washington Post essay a "Papal Bull" that stopped all discussion about gain-of-function dangers.
👉🏻 "Everyone was scared...because Drs. Fauci, Nabel, and Collins had sterilized the debate. We can't have this."
Plan of the Barcelona CReSA lab, showing that drainage from the main labs and the dissection rooms flows right through the site of the extension (where site preparation work had already started):
Work was going on in that top-left quadrant (extension site preparation):
Another view of the site before work started:
Thanks to @RdeMaistre for finding the files.
Worobey is working on a paper showing that the epicenter is a taberna close to the lab.
Holmes has a photo of a well-wined evening there, which he will turn into a paper too.
Places like that are clear zoonotic disasters in the making.
All [ASF] viruses currently circulating in the Member States belong to genetic groups 2-28 and not to the new genetic group 29 to which the virus causing the outbreak in the province of Barcelona belongs - very similar to genetic group 1 that circulated in Georgia in 2007. mapa.gob.es/es/prensa/ulti…