Why do nutrition studies disagree about the effects of food on health?

New paper by @GeorgiaTomova in @AJCNutrition suggests it may be due to routine adjustment for total energy, which can produce misleading results if not used with care!
doi.org/10.1093/ajcn/n…
1/12 #EpiTwitter
Many nutrition studies are interested in substitution effects.

Substitution effects are the effect of SWAPPING a particular nutrient or food with one or more other nutrients or foods while keeping the total energy (or mass) the same.

doi.org/10.1093/ajcn/n…
2/12 #EpiTwitter
There are several approaches to estimating substitution effects.

To test their performance we simulated a compositional dataset with known causal effects (see figure).

We then examined how accurately each approach recovered the truth.

doi.org/10.1093/ajcn/n…
3/12 #EpiTwitter
Good news: all approaches were able to accurately estimate a well-defined substitution effect, i.e. the effect of replacing a single other nutrient or food with a single nutrient or food (e.g. sugar for protein or meat for fish).

doi.org/10.1093/ajcn/n…
4/12 #EpiTwitter
Not so good news: the most common approach* experienced bias with substitution effects involving several nutrients or foods (e.g. meat for cereal, dairy, and fish).

*the leave-one-out model, which controls for total energy intake

doi.org/10.1093/ajcn/n…
5/12 #EpiTwitter
Bad news: Many researchers INADVERTENTLY estimate substitution effects by controlling for total energy intake as a 'confounder' without realising that this can radically change what is being estimated.

doi.org/10.1093/ajcn/n…
6/12 #EpiTwitter
Suppose you are interested in estimating the 'effect' of meat on glucose.

You control for total energy, fruit & veg, alcohol, & other drinks.

You will now estimate the effect of meat INSTEAD OF all other uncontrolled sources of energy.

doi.org/10.1093/ajcn/n…
7/12 #EpiTwitter
Because most studies adjust for total energy and a range of other foods, most studies estimate different things.

This effect is not subtle. The sign can reverse depending on the substitution! This may partly explain the disagreement.

doi.org/10.1093/ajcn/n…
8/12 #EpiTwitter
Very bad news: Accurate substitution modelling assumes all variables are in the same units.

But it is most common for studies to examine food in grams/servings while adjusting for total energy in calories.

This. Breaks. Everything.

doi.org/10.1093/ajcn/n…
9/12 #EpiTwitter
Studies that examine foods in grams/servings while controlling for total energy in calories estimate VERY obscure quantities.

Our simulations showed these models could produce estimates with opposite signs to the truth 🤯😳

doi.org/10.1093/ajcn/n…
10/12 #EpiTwitter
In an accompanying editorial, @daniel_ibsen & @ChristinaDahm conduct a corroborating analysis in real data and confirm the same potential for these 'mixed unit' models to produce estimates with opposite signs to the truth!

doi.org/10.1093/ajcn/n…
11/12 #EpiTwitter
Devastating news: The use of these 'obscure' mixed unit models is extremely common in the literature.

What are the implications for our knowledge about the effects of food on health? I'll leave that for you, dear reader, to ponder!

doi.org/10.1093/ajcn/n…
12/12 #EpiTwitter
PS Some friendly coverage of the paper on the @UniversityLeeds website for those wanting a less technical description!

Thanks to @turinginst for funding @GeorgiaTomova!

leeds.ac.uk/news-science/n…

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More from @PWGTennant

Jun 23
Excited to share exchange with Willett, Stampfer, & @deirdre_tobias published in @AJCNutrition. Hopefully interesting to all in nutrition Epi!

Paper: academic.oup.com/ajcn/article/1…

Willet et al: academic.oup.com/ajcn/advance-a…

@GeorgiaTomova et al: academic.oup.com/ajcn/advance-a…

1/12
#EpiTwitter
Our paper examined common approaches to adjusting for energy intake using a causal framework. Willet et al raised 4 points of disagreement with our conclusions.

I'll try to summarise with our responses. Beware, it jumps straight into technical details!

2/12 cc @GeorgiaTomova
Q1: Partition models

Willet et al: 'the energy partition model is not appropriate because it does not ultimately control for total energy intake" & this "is not consistent with the isocaloric diet/disease relation of greatest interest'

3/12 cc @GeorgiaTomova
Read 12 tweets
Apr 15
Our new study confirms the tragic consequences of delaying the UK's first lockdown.

If it started 1 week earlier, there would have been 20k-35k fewer deaths. The required duration, for the same exit incidence, would also have halved from 69 to 35 days
1/6
journals.plos.org/plosone/articl…
The UK experienced one of the highest per-capita death tolls during the first #Covid19 wave.

It has been fiercely debated whether this was partly due to the UK government's relatively slow initiation of lockdown measures.

2/6
journals.plos.org/plosone/articl…
Our study used novel simulations to estimate the number of #Covid19 cases & deaths that would have happened in England during the first wave if lockdown measures had been started 1 week earlier, & the impact on the required duration of lockdown.
3/6
journals.plos.org/plosone/articl…
Read 9 tweets
Apr 7
Most people don't realise that academic science is a very long way from healthy.

In fact, all good academic scientists must, at some point, go through a reckoning. When they awaken from the 'dream of science' to realise just how broken things are.

🧵 1/11
#ScienceInCrisis
My own crisis happened during my PhD. It was gradual, but at some point I realised academic science wasn't driven by truth, quality, or collectivism, but ego, opportunism, and exploitation. I couldn't believe it. It seemed so wrong and unfair.

2/11
#ScienceInCrisis
It hit me like grief. Anger, depression, bargaining. Years later & I'm still struggling. It hurts when I see bad science or a bad scientist getting celebrated.

I've been been told my 'problem' is I 'care about doing good science'. But I refuse to give in.

3/11
#ScienceInCrisis
Read 12 tweets
Sep 17, 2021
A thread on our study in @BJOGTweets, which uses a regression discontinuity approach to estimate the separate effects of fasting plasma glucose and diagnosis of gestational diabetes in women screened during pregnancy
/1

#EpiTwitter
There's a lot of debate surrounding the screening and treatment of pregnant women for gestational diabetes.

In most existing research, women with gestational diabetes have only modestly increased risks of adverse outcomes, such as large-for-gestational-age.

2/
#EpiTwitter
In England, women are diagnosed with gestational diabetes if they have a fasting glucose above 5.6mmol/L. This is a higher than other countries, including Scotland, where the threshold is 5.1mmol/L. It's thought women with 'mild' hyperglycaemia have low risk.

3/
#EpiTwitter
Read 9 tweets
Aug 20, 2021
It's worrying for a new NICE guidance to be delayed and undermined on the grounds it doesn't match 'clinical experience'.

If the scientific evidence always matched 'clinical experience', there'd be no point to research or evidence based medicine... 🤔

#EBM #EpiTwitter
If 'evidence based medicine' is working there should be REGULAR occasions when the 'evidence' not only disagrees with 'clinical experience' but actively contradicts it.

Wherever 'clinical experience' is allowed to overrule 'scientific evidence', we return to quackery.
'Clinical experience' can be extremely misleading, and history is littered with examples. That's why we take a wider dispassionate view and aim to update practice based on science. This principle is the main distinction between contemporary medicine and 'medicine' of old.
Read 8 tweets

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