Many nutrition studies are interested in substitution effects.
Substitution effects are the effect of SWAPPING a particular nutrient or food with one or more other nutrients or foods while keeping the total energy (or mass) the same.
Good news: all approaches were able to accurately estimate a well-defined substitution effect, i.e. the effect of replacing a single other nutrient or food with a single nutrient or food (e.g. sugar for protein or meat for fish).
Not so good news: the most common approach* experienced bias with substitution effects involving several nutrients or foods (e.g. meat for cereal, dairy, and fish).
*the leave-one-out model, which controls for total energy intake
Bad news: Many researchers INADVERTENTLY estimate substitution effects by controlling for total energy intake as a 'confounder' without realising that this can radically change what is being estimated.
In an accompanying editorial, @daniel_ibsen & @ChristinaDahm conduct a corroborating analysis in real data and confirm the same potential for these 'mixed unit' models to produce estimates with opposite signs to the truth!
Our paper examined common approaches to adjusting for energy intake using a causal framework. Willet et al raised 4 points of disagreement with our conclusions.
I'll try to summarise with our responses. Beware, it jumps straight into technical details!
Willet et al: 'the energy partition model is not appropriate because it does not ultimately control for total energy intake" & this "is not consistent with the isocaloric diet/disease relation of greatest interest'
Our new study confirms the tragic consequences of delaying the UK's first lockdown.
If it started 1 week earlier, there would have been 20k-35k fewer deaths. The required duration, for the same exit incidence, would also have halved from 69 to 35 days 1/6 journals.plos.org/plosone/articl…
The UK experienced one of the highest per-capita death tolls during the first #Covid19 wave.
It has been fiercely debated whether this was partly due to the UK government's relatively slow initiation of lockdown measures.
Our study used novel simulations to estimate the number of #Covid19 cases & deaths that would have happened in England during the first wave if lockdown measures had been started 1 week earlier, & the impact on the required duration of lockdown. 3/6 journals.plos.org/plosone/articl…
Most people don't realise that academic science is a very long way from healthy.
In fact, all good academic scientists must, at some point, go through a reckoning. When they awaken from the 'dream of science' to realise just how broken things are.
My own crisis happened during my PhD. It was gradual, but at some point I realised academic science wasn't driven by truth, quality, or collectivism, but ego, opportunism, and exploitation. I couldn't believe it. It seemed so wrong and unfair.
It hit me like grief. Anger, depression, bargaining. Years later & I'm still struggling. It hurts when I see bad science or a bad scientist getting celebrated.
I've been been told my 'problem' is I 'care about doing good science'. But I refuse to give in.
A thread on our study in @BJOGTweets, which uses a regression discontinuity approach to estimate the separate effects of fasting plasma glucose and diagnosis of gestational diabetes in women screened during pregnancy
/1 #EpiTwitter
In England, women are diagnosed with gestational diabetes if they have a fasting glucose above 5.6mmol/L. This is a higher than other countries, including Scotland, where the threshold is 5.1mmol/L. It's thought women with 'mild' hyperglycaemia have low risk.
If 'evidence based medicine' is working there should be REGULAR occasions when the 'evidence' not only disagrees with 'clinical experience' but actively contradicts it.
Wherever 'clinical experience' is allowed to overrule 'scientific evidence', we return to quackery.
'Clinical experience' can be extremely misleading, and history is littered with examples. That's why we take a wider dispassionate view and aim to update practice based on science. This principle is the main distinction between contemporary medicine and 'medicine' of old.