Vipin M. Vashishtha Profile picture
Jul 2 7 tweets 2 min read Twitter logo Read on Twitter
A genetic risk factor for the development of #LongCovid!

A new study identified the first genome-wide significant association for #LongCOVID at the FOXP4 locus. 1/
#FOXP4 has been previously associated with COVID-19 severity, lung function, & cancers, suggesting a broader role for lung function in the pathophysiology of LongCOVID. 2/
When SARS-CoV-2 infection is required for COVID-19, and severe COVID-19, are all genetic variants that increase COVID-19 susceptibility or severity equally large risk factors for Long COVID? 3/
In this study, researchers aimed to answer this question through examining variant effect sizes between SARS-CoV-2 infection susceptibility, COVID-19 severity, and Long COVID. 4/
They discovered that the majority of variants affected only SARS-CoV-2 susceptibility or COVID-19 severity. In contrast, the FOXP4 variants had higher effect size for Long COVID than expected, suggesting an independent role of FOXP4 for Long COVID 5/
Such observation offers clues on biological mechanisms, such as #FOXP4 affecting pulmonary function and immunity, which then contribute to the development of Long COVID. 6/
Overall, the above study elucidates genetic risk factors for Long COVID, the relationship between Long COVID and severe COVID-19, and finally possible mechanisms of how FOXP4 contributes to the risk of Long COVID. 7/

medrxiv.org/content/10.110…

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More from @vipintukur

Jul 1
What’s going on in #Japan?

⚡️ Japan is experiencing its 9th Covid wave!

⚡️Okinawa is the most badly hit prefecture of Japan

⚡️Japanese health ministry says this outbreak is more serious than the one the prefecture experienced when infections surged in January. 1/ https://t.co/okSnUy1EkJ
⚠️ Chubu Hospital suspends pediatric emergency services at night due to shortage of doctors & spread of Covid-19!

⚡️Latest Covid outbreak in Japan may be more severe than January 2023!

⚡️In Okinawa, Covid hospitalizations up by 25% in one week! 2/

https://t.co/JfBBW1JDPUryukyushimpo.jp/news/entry-173…
What about vaccination histories?

During the 8th Covid wave, 18.8% of the 1,309 people who died had received 4 COVID vaccine shots, while 8.7% had been vaccinated 5 times. And 16.2% had never been vaccinated, while the vaccination history was not known for 42.4%. 3/
Read 4 tweets
Jun 28
A new systematic review on COVID-19 Booster Effectiveness included 53 studies estimating VE of the 1st booster, 16 for the 2nd booster. Of these studies, 2 were case-control, 17 were test-negative, & 50 were cohort studies. Together they included ~130 million people worldwide. 1/
Results:

-VE for all outcomes was very high (around 90%) in earlier studies (i.e., in 2021), but became attenuated and more heterogeneous over time (around 40%-50% for infection, 60%-90% for hospitalization, and 50%-90% for death). 2/
VE compared to the previous dose was lower for the second booster (10-30% for infection, 30-60% against hospitalization, and 50-90% against death). 3/



Read 5 tweets
Jun 26
Immune imprinting proved beneficial!

Most studies have indicated that prior infection of Wuhan-Hu-1 (WH1), which is the ancestral SARS-CoV-2 strain, & WH1-based vaccination have weakened humoral immune responses to o subsequent omicron infection. 1/
These findings are consistent with immune imprinting in influenza virus infection. Antigenic cartography studies have demonstrated that antigenic distances between SARS-CoV-2 variants and Omicron sub-variants were only of 103-fold change in neutralization titer levels. 2/
Thus, as compared to influenza infection, SARS-CoV-2 infection manifests smaller imprinting effects. 3/
Read 11 tweets
Jun 24
‘As the COVID-19 pandemic threat seemingly fades into the annals of history, scientists are attempting to identify which pathogen will pose the next large-scale threat to humanity’ 1/
Could it be the little-known yet formidable ‘#Langya virus’ belonging to the family of #Henipavirus, which shares similarities with COVID like respiratory symptoms w/ pneumonia. Again, reported from Chinese labourers 2/
Henipaviruses are the most lethal of paramyxoviruses, killing around 70% of those who contract them. The first two Henipaviruses identified in humans were the Nipah virus, and the Hendra virus. 3/

https://t.co/rWvD2O6cHDnature.com/articles/s4146…






Read 8 tweets
Jun 20
Why is COVID notably severe in the elderly & in those w/ underlying chronic conditions?
A new study concludes that increasing the ACE2 location near endocytic lipids increases viral infectivity & may help explain the selective severity of COVID in aged & diseased populations 1/ Image
Cholesterol in the plasma membrane is an important regulator of ACE2 localization between GM1 & PIP2 clusters and this distribution is a core contributor to SARS-CoV-2 entering the endocytic pathway.

Serum lipids increase SARS-CoV-2 pseudovirus (SARS2-PV) infection👇
2/ Image
Additional saturated lipids, such as sphingomyelins, which are minor components of apoE cargo, likely contribute to ACE2 translocation especially in the aged and those with chronic inflammation.

Age and disease increase cholesterol in mouse lung tissue👇 3/ Image
Read 7 tweets
Jun 20
Knowledge about how genomes change over time is key for our understanding of evolution. Though fission & fusion rearrangements represent just a small fraction of the ways in which genomes can change, we know little about how these mutations become fixed in populations 1/
Rearrangements could fix by genetic drift if they are weakly deleterious or neutral, or they may instead be favoured by positive natural selection. 2/
To address this, a team of #Spanish researchers analysed genome wide variation in butterflies to infer past demography and natural selection in relation to chromosome rearrangements. 3/
Read 5 tweets

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