Mushtaq Bilal, PhD Profile picture
Nov 26, 2023 14 tweets 5 min read Read on X
Zotero is the best citation and reference management app.

It's totally free.

But many folks don't know how to use it.

Here's a tutorial on how to automate your citations and references with Zotero:
1. Go to zotero(dot)org.

Download "Zotero 6" and install the app on your computer.
2. You will also need to install the Zotero Connector. It will connect your Zotero desktop app with your browser.

Click on "Install Chrome Connector" and add it to your browser.

Once it's added. click on the puzzle-like icon and pin the Zotero Connector to your browser.
3. You will also need to create a Zotero account. Click on "Log In" and then "Register for a free account."

This will give you an online backup of your Zotero library.
4. Open your Zotero desktop app.

Click on "File" and select "New Collection."

Choose a name for your collection.
5. Go to Google Scholar or Pubmed or your university's online library and look up articles using keywords.

You will get a list of relevant search results.

Click on the Zoteor Connector in the top-right corner and it will open an Item Select.

Select the articles/books you think are relevant to your project and click "OK."

Zotero will save these items in the collection you just created.

Go to your Zotero and you will all the items in the collection.

Zotero will automatically retrieve open access PDFs of articles.

If you are signed in to your univeristy's library, it will also access paywalled articles and add them to your collection.
6. You can also items manually. To do so, simply drag and drop PDFs in your collection.

Zotero will retrieve their metadata and add it to your collection.
7. You can read an article in Zotero and also take notes on it.

Double-click the article you want to read and Zotero will open it for you.

You can highlight and annotate the article. You can also write lengthy notes in Zotero's Note Editor.
Want to learn how to supercharge your academic writing with AI apps?

I have a complete tutorial for you.

4,300+ academics including those at Harvard, Stanford, and Yale are using it.

You can get it here👇
efficientacademicwriter.carrd.co
8. Open your MS Word and start drafting your paper.

To add a citation, place the cursor where you want to add it. Open the Zotero tab and click on "Add/Edit Citation."

Zotero will open a red search bar for you. Type in the name of the author you want to cite and Zotero will prepare the citation for you.

You can add the page number if you want to.
9. Zotero is also available for Google Docs.

The interface is a little different than MS Word but the functionality is the same.
10. Once you are done drafting, place the cursor where you want to add your bibliography.

Then click on "Add/Edit Bibliography" and Zotero will add the properly formatted bibliography for you.
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2. Bookmark it so you can come back to it later.

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More from @MushtaqBilalPhD

Apr 19
Most apps for academic research require paid subscriptions.

Here are 10 that are free:
1. Dimensions[.]ai

AI-powered database with 150M+ publications. The landing page of Dimensions.
2. SemanticScholar[.]org

AI-powered database with 225M+ papers covering all academic fields. The landing page of Semantic Scholar.
Read 14 tweets
Apr 13
😢
ChatGPT: $20/m
Claude: $20/m
Gemini: $20/m
Access to academic databases❌

😃
Chat Academia: $15/m only

ChatGPT + Claude + Gemini.
Integrated with multiple academic databases✅

Here's how to use Chat Academia:
1. Go to and click on "Get started."

You will need to buy a subscription to use the app.

It has three plans: $15/m, $30/m, and $45/m. chatacademia.com
2. This is how the homepage of Chat Academia will look like.

Click on "AI Chat" in the top-left and then "Create chat" in the top-right.

In the chat interface, you will see multiple AI models and multiple academic databases. Select the model/databse you want to use.
Read 13 tweets
Apr 11
Most AI apps need paid subscriptions, but the Chinese are building apps that are free.

Bohrium is a free AI app built for researchers.

• Combines Deep Seek's reasoning model with academic databases.
• Gives detailed answers and cites published papers.

Here's how to use it:
1. Go to bohrium[.]com and click on "Log in" in the bottom-left corner.

Enter your email to sign up for a free account.
2. In the bottom-left of the chat box, you will see options for AI models and databases.

Bohrium has integrated databases for natural sciences, engineering, life sciences, and the humanities.

For detailed answers you can select "DeepThink."
Read 8 tweets
Apr 5
Finding relevant papers for literature review takes a lot of time and labor.

You can run visual searches from within Zotero to supercharge your literature — for free.

You can also do it with Mendeley and EndNote.

Here's how:
1. Go to github(dot)com/inciteful-xyz/inciteful-zotero-plugin

Scroll down a little and click on "Version 7 - latest release."

This will download an xpi file on your computer.
2. Open your Zotero desktop app.

Click on "Tools" and select "Plugins."

In the Plugins Manager, click on the Settings icon and select "Install Plugin From File."

Navigate to the xpi file you just download and add it.

Close the Plugin Manager.
Read 10 tweets
Apr 4
Biggest flaw of AI apps: hallucinations — fake references to papers that don't even exist.

Research Flow is a new app that solves this problem. It uses full text of papers to answer your questions.

Here's an overview of its features:
1. Go to rflow(dot)ai

Click on "Try for free" to sign up for a free account.
2. In the bottom-left of the search bar, you will three options: academic, web search, and text generation.

RFlow offers three models: Claude, Gemini, and DeepSeek's latest version V3.

RFlow supports English, Chinese, and Korean.
Read 11 tweets
Mar 28
Google Scholar is useful, but it's stuck in the past.

Ai2 is building a new AI-powered search engine for researchers.

It looks for papers, follows citations, evaluates relevance, runs follow-up queries, and shows you only relevant papers — and it's free:
1. Go to paperfinder.allen(dot)ai/chat and sign up for a free account.

Type in your question and hit Enter/Return.

Ai2 will start a search. It will mimic a human researcher in looking up papers, and then evaluating/ranking them for relevance.
2. Once it's done, Ai2 will give you a list of papers.

Under every paper, it will show you if it's perfectly relevant, relevant, or somewhat relevant to your query.

It will also show you evidence of what makes a paper perferctly or somewhat relevant.
Read 8 tweets

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