Mushtaq Bilal, PhD Profile picture
Nov 26, 2023 14 tweets 5 min read Read on X
Zotero is the best citation and reference management app.

It's totally free.

But many folks don't know how to use it.

Here's a tutorial on how to automate your citations and references with Zotero:
1. Go to zotero(dot)org.

Download "Zotero 6" and install the app on your computer.
2. You will also need to install the Zotero Connector. It will connect your Zotero desktop app with your browser.

Click on "Install Chrome Connector" and add it to your browser.

Once it's added. click on the puzzle-like icon and pin the Zotero Connector to your browser.
3. You will also need to create a Zotero account. Click on "Log In" and then "Register for a free account."

This will give you an online backup of your Zotero library.
4. Open your Zotero desktop app.

Click on "File" and select "New Collection."

Choose a name for your collection.
5. Go to Google Scholar or Pubmed or your university's online library and look up articles using keywords.

You will get a list of relevant search results.

Click on the Zoteor Connector in the top-right corner and it will open an Item Select.

Select the articles/books you think are relevant to your project and click "OK."

Zotero will save these items in the collection you just created.

Go to your Zotero and you will all the items in the collection.

Zotero will automatically retrieve open access PDFs of articles.

If you are signed in to your univeristy's library, it will also access paywalled articles and add them to your collection.
6. You can also items manually. To do so, simply drag and drop PDFs in your collection.

Zotero will retrieve their metadata and add it to your collection.
7. You can read an article in Zotero and also take notes on it.

Double-click the article you want to read and Zotero will open it for you.

You can highlight and annotate the article. You can also write lengthy notes in Zotero's Note Editor.
Want to learn how to supercharge your academic writing with AI apps?

I have a complete tutorial for you.

4,300+ academics including those at Harvard, Stanford, and Yale are using it.

You can get it here👇
efficientacademicwriter.carrd.co
8. Open your MS Word and start drafting your paper.

To add a citation, place the cursor where you want to add it. Open the Zotero tab and click on "Add/Edit Citation."

Zotero will open a red search bar for you. Type in the name of the author you want to cite and Zotero will prepare the citation for you.

You can add the page number if you want to.
9. Zotero is also available for Google Docs.

The interface is a little different than MS Word but the functionality is the same.
10. Once you are done drafting, place the cursor where you want to add your bibliography.

Then click on "Add/Edit Bibliography" and Zotero will add the properly formatted bibliography for you.
Found this thread on Zotero helpful?

1. Scroll to the top and hit Like on the first tweet.

2. Bookmark it so you can come back to it later.

3. Follow me for more threads on academic writing.
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More from @MushtaqBilalPhD

May 3
Apps like ChatGPT are unsuitable for scientific research. They generate fake references to papers that don't exist.

So, researchers at Future House built an AI scientist.

It generates detailed literature reviews with references to state-of-the-art research. And it's free.🧵
1. Go to futurehouse[.]org.

Click on "Platform" in the top-right corner. Sign up for a free account.

Future House has four AI agents:

• Crow: Concise search
• Falcon: Detailed literature reviews
• Owl: Finding literature gaps
• Pheonix: Chemistry-related queries
2. Select "Crow" and type in your question.

It'll look up relevant sources, gather evidence, and compose an answer. Click on "Results" to read it.

Hover your cursor over an endnote and it will show you the abstract of the paper cited.

A Crow search takes ~5 min.
Read 9 tweets
Apr 30
NotebookLM was already one of the best AI apps for academic work.
Now it supports 50+ languages.

• Summarize papers
• Generate audio overviews of papers
• Ask question about papers
• Prepare study guides

All this in your own language and that too for free.
1. Go to notebooklm[.]google[.]com.

Click on "Create new notebook" and upload a paper.

NotebookLM will give you its summary.
2. Click on "Settings" in the top-right corner and select "Output Language."

From the dropdown menu, select your language and click on "Save."
Read 10 tweets
Apr 29
Chat Academia now lets you use your own OpenAI API key.

This will make the app much more affordable. You can use it to integrate 5 academic databases with ChatGPT.

Here's how to set your OpenAI API key in Chat Academia:
1. Go to platform[.]openai[.]com and sign up for an account.
2. Once you've logged in, click on "Start building" in the top-right corner.

Enter your name and select the level of your technical proficiency. Select "Create organization" and skip the next step.

Then click on "Generate API Key" and your API key will be generated.
Read 11 tweets
Apr 19
Most apps for academic research require paid subscriptions.

Here are 10 that are free:
1. Dimensions[.]ai

AI-powered database with 150M+ publications. The landing page of Dimensions.
2. SemanticScholar[.]org

AI-powered database with 225M+ papers covering all academic fields. The landing page of Semantic Scholar.
Read 14 tweets
Apr 13
😢
ChatGPT: $20/m
Claude: $20/m
Gemini: $20/m
Access to academic databases❌

😃
Chat Academia: $15/m only

ChatGPT + Claude + Gemini.
Integrated with multiple academic databases✅

Here's how to use Chat Academia:
1. Go to and click on "Get started."

You will need to buy a subscription to use the app.

It has three plans: $15/m, $30/m, and $45/m. chatacademia.com
2. This is how the homepage of Chat Academia will look like.

Click on "AI Chat" in the top-left and then "Create chat" in the top-right.

In the chat interface, you will see multiple AI models and multiple academic databases. Select the model/databse you want to use.
Read 13 tweets
Apr 11
Most AI apps need paid subscriptions, but the Chinese are building apps that are free.

Bohrium is a free AI app built for researchers.

• Combines Deep Seek's reasoning model with academic databases.
• Gives detailed answers and cites published papers.

Here's how to use it:
1. Go to bohrium[.]com and click on "Log in" in the bottom-left corner.

Enter your email to sign up for a free account.
2. In the bottom-left of the chat box, you will see options for AI models and databases.

Bohrium has integrated databases for natural sciences, engineering, life sciences, and the humanities.

For detailed answers you can select "DeepThink."
Read 8 tweets

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