BREAKING🔔 A new study from G2P-Japan🇯🇵 is out! The preprint will be out so soon, but we first show our results on the efficacy of XBB.1.5 monovalent vaccine - comparison between infection-naïve and XBB-infected individuals. Please retweet/repost🔥 1/
XBB.1.5 monovalent mRNA vaccine has been available since September 2023. However, we found that breakthrough infection with XBB subvariants, including XBB.1.5, does not efficiently induce humoral immunity against the infecting XBB subvariants. e.g., 2/
These observations raise the possibility that the XBB.1.5 monovalent vaccine may not be able to efficiently induce humoral immunity against emerging SARS-CoV-2 variants, including a variety of XBB subvariants as well as BA.2.86. 3/
To address this possibility, we collected two types of sera from individuals vaccinated with XBB.1.5 vaccine:
A) No prior infection
B) XBB subvariant infection prior to XBB.1.5 vaccination
We collected sera of pre- and post-vaccination and performed a neutralization assay. 4/
As expected, XBB.1.5 vaccine sera with prior XBB infection efficiently (1.8- to 3.6-fold) boosted antiviral humoral immunity against all variants tested. 5/
In the case of the XBB.1.5 vaccine sera without prior infection, XBB.1.5 vaccine also induced antiviral activity against all variants tested, suggesting a single dose of XBB.1.5 vaccine potentially induces antiviral immunity against XBB & BA.2.86 without prior infection. 6/
The induction efficiency of neutralizing activity was comparable between infection-naïve cohort (A) and XBB-infected cohort (B). However, in sera collected before XBB.1.5 vaccination, the neutralization titer of sera from (B) was 5.7- to 10.4-fold higher than that from (A)! 7/
Also, although all 'pre' vaccination sera of XBB-infected cohort exhibited antiviral activity against all variants tested, some 'post' vaccinated individuals without infection showed NO antiviral activity against XBB subvariants & BA.2.86 (# above 'Post' in A). 8/
Altogether, these results suggest that a single dose of XBB.1.5 monovalent vaccine may not be sufficient to induce effective antiviral humoral immunity in infection-naïve individuals and that a booster dose of XBB.1.5 monovalent vaccine may be required in some cases. 9/
Please also see fantastic results from Dr. David Ho's lab. 10/10
BREAKING🔔 The 53th paper from G2P-Japan🇯🇵 is out at Lancet Infectious Diseases @TheLancetInfDis. We elucidated the virological characteristics of SARS-CoV-2 NB.1.8.1. Please repost🔥 1/ thelancet.com/journals/lanin…
NB.1.8.1 is a descendant strain of XDV (XDV is a recombinant of XDE, FL.13.4 and JN.1) and is currently spreading in Asian countries. 2/
NB.1.8.1 has 7 mutations in spike and 23 mutations in the non-spike region compared to JN.1. Compared to XEC spike, NB.1.8.1 spike has 4 substitutions, G184S, K478I, A435S and L1104V. 3/
BREAKING🔔 The 50th🎉 paper from G2P-Japan🇯🇵 is out at Lancet Infectious Diseases
@TheLancetInfDis. We elucidated the virological characteristics of SARS-CoV-2 LP.8.1. Please repost🔥 1/ thelancet.com/journals/lanin…
In spike, LP.8.1 has 9 mutations (S31del, F186L, R190S, R346T, V445R, F456L, Q493E, K1086R, and V1104L) compared with JN.1; and 8 amino acid residues (T22N, S31del, F59S, F186L, R190S, R346T, H445R, and K1086R) differ between the spike proteins of LP.8.1 and XEC. 2/
Transmissibility/fitness (Re):
Epidemic dynamics modeling led by Jumpei @jampei2 and Kaho showed that the Re of LP.8.1 is ~1.1-fold higher than that of XEC in 🇺🇸. However, the Re of LP.8.1 and XEC were almost comparable in 🇯🇵. Difference between countries🤔?? 3/
BREAKING🔔 A new study from G2P-Japan🇯🇵, led by Keiya @Keiya717, is out at @biorxivpreprint. We assessed the humoral immunity induced by JN.1 mRNA vaccines against a broad range of SARS-CoV-2 variants including JN.1, KP.3.1.1 & XEC. Please repost🔥 1/ biorxiv.org/content/10.110…
In this study, we used 2 mRNA vaccines, one is from Pfizer/BioNTech🇺🇸🇩🇪, while another is from Daiichi-Sankyo🇯🇵. The good news is that there are no significant differences between them and both broadly neutralized a variety of SARS-CoV-2 including JN.1, KP.3.1.1 and XEC. 2/
But there are two scientific interests.
First, compared to our recent study using JN.1 and KP.3.3 breakthrough (i.e. natural) infection sera, antiviral humoral immunity against KP.3 and XEC was weakly induced. However, JN.1 mNRA vaccine can. Why🤔?? 3/
BREAKING🔔 A new study from G2P-Japan🇯🇵, led by Yu in my lab, is out at bioRxiv @biorxivpreprint. We elucidated the virological characteristics of SARS-CoV-2 #XEC. Please repost🔥 1/ biorxiv.org/content/10.110…
Compared with KP.3, #XEC harbors two spike substitutions, S:T22N and S:F59S. Recombination analysis by Shusuke @KawakuboShusuke showed that XEC is a recombinant lineage of KS.1.1 (JN.13.1.1.1) and KP.3.3 (JN.1.11.1.3.3) with a breakpoint at genomic position 21,738–22,599. 2/
Transmissibility/fitness (Re):
Molecular phylogenetic-epidemic dynamics modeling led by Jumpei @jampei2 and Kaho showed that the Re of #XEC is greater than that of KP.3.1.1, the most predominant variant in the world. 3/