Emmanuel Profile picture
Jun 6, 2024 โ€ข 17 tweets โ€ข 6 min read โ€ข Read on X
๐™Ž๐˜ผ๐™๐™Ž-๐˜พ๐™Š๐™‘-2 :
๐™๐™๐™š ๐™œ๐™ง๐™š๐™–๐™ฉ ๐˜พ๐™Š๐™‰๐™๐™๐™Ž๐™„๐™Š๐™‰ ๐™—๐™š๐™ฉ๐™ฌ๐™š๐™š๐™ฃ ๐™Ž๐™€๐˜ผ๐™Ž๐™Š๐™‰๐˜ผ๐™‡, ๐˜พ๐™”๐˜พ๐™‡๐™„๐˜พ ๐™–๐™ฃ๐™™ ๐™ˆ๐™€๐™๐™€๐™Š๐™๐™Š๐™‡๐™Š๐™‚๐™„๐˜พ๐˜ผ๐™‡ ๐™›๐™–๐™˜๐™ฉ๐™ค๐™ง๐™จ
(๐˜ฎ๐˜ฆ๐˜จ๐˜ข-๐˜ต๐˜ฉ๐˜ณ๐˜ฆ๐˜ข๐˜ฅ - 1๐˜ด๐˜ต ๐˜ฑ๐˜ข๐˜ณ๐˜ต)
2) SEASONAL DISEASES refer to illnesses or health conditions (flu, common cold, allergies...) that are more prevalent during SPECIFIC seasons of the year (usually winter or spring).
These diseases are influenced by environmental factors and the presence of seasonal pathogens. Image
4) COVID-19 is a PANDEMIC and CYCLIC disease.
Pandemic, as it has spread globally and continues to affect populations worldwide.
Cyclic, because it appeared on average every 3/4 months which could give the false impression that it followed the seasons. Image
5) Like any rule there are exceptions, with cycles which have not taken place in some countries, with generally a more intense cycle afterwards.

Contrary to what some say, they are not linked exclusively ... Image
6) ... to the emergence of new variants, as we have shown for the US ๐Ÿ‘‡
There is a combination of factors, new variants, waning immunity / increase in nb of susceptible people, population movements and changes in modes of transmission (vacations, school breaks, etc.) ... Image
7) What is the contribution of meteorological factors (temperature, humidity) to these cycles?

In less than a month, there have been 3 fascinating studies on this subject which we will develop in a 2nd part, far from clichรฉs or abusive simplifications ๐Ÿ˜Š
8) METEOROLOGICAL FACTORS
(2๐˜ฏ๐˜ฅ ๐˜ฑ๐˜ข๐˜ณ๐˜ต)

1st study :
"A mixture of mobility and meteorological data provides a high correlation with COVID-19 growth in an infection-naive population: a study for Spanish provinces"
frontiersin.org/journals/publiโ€ฆ
Image
9) Analysis of Spanish COVID-19 data reveals high correlations between growth rate and principal components of mobility and meteorological data, with mobility playing a larger role. Correlations are maximal at 2-3 week time lags, consistent with delays between infection ... Image
10) ... symptom onset, and case reporting. Combining mobility and meteorological data improves explanatory power compared to either alone.

2nd study :
COVID-19 dynamics in Hiroshima, Japan, and its association with meteorological factors over 3.5 years.
cureus.com/articles/24332โ€ฆ
Image
11) Wind speed showed the strongest correlation with COVID-19 metrics. SARS-CoV-2 variant distributions, with Alpha, Delta, and Omicron predominant, were also linked to meteorological factors. Image
12) The findings highlight the role of environmental factors in shaping pandemic outcomes and underscore the need for integrated surveillance approaches to mitigate future outbreaks. Image
13) Spearman's correlation coefficient. Image
14) Maybe the most interesting one to end :
"Non-linear effects of meteorological factors on COVID-19: An analysis of 440 counties in the americas"
cell.com/heliyon/fullteโ€ฆ
Image
15) This study analyzed the non-linear effects of meteorological factors (temperature, humidity, solar radiation, surface pressure, precipitation, wind speed) on COVID-19 transmission across 440 counties in the Americas from 2020-2021. The results showed ... Image
16) - Temperature had a positive correlation below 5ยฐC and above 23ยฐC, and a negative correlation between 5-23ยฐC.
- Relative humidity and solar radiation exhibited significant negative correlations, with a rapid decrease in daily new cases above 74% humidity and ... Image
17) ...750 kJ/m2 solar radiation.
โ€ข Surface pressure showed an inverse relationship at 0-10 and 15-21 day lags.
โ€ข Precipitation had no significant associationใ€‚
โ€ข Wind speed had a slightly higher infection risk under low (0-2 m/s) and high (10 day lag) conditions. Image
18) The study provides important insights into the complex, non-linear relationships between meteorological factors and COVID-19 transmission, highlighting the need for regional and latitudinal considerations in understanding pandemic dynamics.

Thanks and nice weather to you ๐Ÿ˜Š Image

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More from @ejustin46

Apr 29
Why is Identifying "Non-Trivial SARS-CoV-2 Population Structure within Hosts" Important for Understanding SARS-COV-2 Evolution and the Emergence of New Variants?

journals.plos.org/plospathogens/โ€ฆImage
2) The "non-trivial population structure" refers to the viral population within a host consisting of two or more distinct, independently evolving subpopulations, rather than a single, homogeneous population. Image
3) The key points about non-trivial population structure are:
โ–ถ๏ธ It was relatively common, found in 5 out of the 9 chronic SARS-CoV-2 infection cases examined.
โ–ถ๏ธ It was more prevalent in severely immunocompromised individuals compared to those not significantly immunocompromised Image
Read 7 tweets
Apr 26
No, Omicron is not the "humanized" SARS-COV-2 !

(Explanation in simple terms)
biorxiv.org/content/10.110โ€ฆImage
2) Viruses are not living things. They are tiny particles that can only make copies of themselves inside the cells of living things, like humans. When a virus makes copies of itself, it doesn't always make perfect copies.
3) Sometimes, little mistakes happen, and the new virus has a small change, or mutation, in its genes.

Most of the time, these mutations don't do anything useful for the virus. But every now and then, a mutation might happen that makes the virus better at infecting people. Image
Read 7 tweets
Apr 26
"What if humans had sent SARS-COV-2 into space, or even brought COVID-19 along for astronauts?"

biorxiv.org/content/10.110โ€ฆImage
2) This study looks at the risks of COVID-19 for people traveling to space.

Space travel is becoming more common, with over 600 people having gone to space. But COVID-19 could be a big problem for astronauts in the unique environment of space. Image
3) The study aims to understand how COVID-19 might behave differently in space compared to on Earth.

The researchers reviewed studies on other airborne diseases in space. They found that some diseases, like Epstein-Barr virus and Serratia bacteria ... Image
Read 6 tweets
Apr 24
From Lung Damage to Gut Dysbiosis:
The Lasting Implications of SARS-CoV-2 Variant-Specific Microbiome Changes (From Wuhan strain to Omicron)
labanimres.biomedcentral.com/articles/10.11โ€ฆImage
2) The Wuhan strain of SARS-CoV-2 caused serious damage to the lungs of infected mice. The mice had a very high chance of dying from this strain. The researchers also looked at the bacteria in the lungs and guts of the infected mice. Image
3) The Wuhan strain increased harmful bacteria like E. coli in the lungs. This can make the lungs more prone to other infections.

The Omicron variant caused different changes in the gut bacteria of the mice. It increased certain bacteria linked to inflammation in the gut. Image
Read 5 tweets
Apr 23
What are GAMMA CORONAVIRUSES ?
And why did we decide to talk about it? Image
Image
2) A brief reminder :

โ–ถ๏ธ SARS-CoV-2 belongs to the family Coronaviridae, is classified as a coronavirus and is responsible for COVID-19
โ–ถ๏ธ Bird Flu refers to various strains of the influenza virus, particularly those in the Orthomyxoviridae family including H5N1 and H7N9. Image
3) โ–ถ๏ธ Gammacoronavirus belongs to the family Coronaviridae like SARS-COV-2.

Some notable gammacoronaviruses include:
- Infectious Bronchitis Virus (IBV): A major pathogen in poultry responsible for respiratory disease and reduced egg production. Image
Read 10 tweets
Apr 21
A TREATMENT that Could Finally END Long COVID Suffering ?

This isn't the first time a treatment has been announced, and as millions continue to struggle with long Covid, we need to remain both cautious and hopeful ๐Ÿค— Image
2) Researchers at WEHI announced that they discovered a new drug that can stop long COVID symptoms in mice. This drug is more effective than the current top treatment, Paxlovid, for both long COVID and acute COVID cases. Image
3) They focused on a specific protein called PLpro that other treatments haven't targeted well. This breakthrough could lead to new medicines for long COVID, a condition where people continue to feel sick long after their COVID-19 infection. Image
Read 4 tweets

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