Dan O'Hara Profile picture
Sep 12, 2024 • 9 tweets • 4 min read • Read on X
This week's UKHSA data is out, and so our Covid PCR Positivity map has automatically updated with the fresh data.

We've also added a couple of features; I'll explain how they work.

🧵 >>>

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When you click on an area now, you're shown a trendline for over the last 7 days, so that you can determine if prevalence is rising or falling locally.

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Clicking on the name of the local authority will take you straight to the UKHSA dashboard testing page, where you can see if testing is being done consistently.

The number of people tested over the last 7 days is always incomplete, & is adjusted upwards the following week.

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Clicking on the date will take you to the API result, so you can verify for yourself that what the map shows you is accurate.

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In some areas, the county council is split into lower-tier borough or district councils, such as here: Worthing Borough Council, in West Sussex County Council.

The % and trendline shown is for West Sussex as a whole.

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If you click on the name, Worthing, you're taken straight to the UKHSA dashboard page for that lower-tier area.

As you can see, that area has not reported results for a month. So on the map, we're sticking with the more reliable % for the whole county.

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We've had a few questions about what we can really learn from PCR positivity.

I've posted a lot over the last 18 months about how well PCR positivity tracks prevalence and the shape of waves, even after testing was massively cut back.

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But I'd also like to draw people's attention to Adam Kucharski's new paper, in which he demonstrates that PCR prevalence in a small community - Premier League footballers - tracked national prevalence as measured by the ONS remarkably precisely.



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(and for those who don't have the link to the map, posted last week: )jamestindall.info/skeuomorpholog…

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More from @skeuomorphology

Feb 20
The PCR positivity map has updated.

This week's data shows us where the increase in positivity is focused. All the hotspots correlate with rising hospital admissions.



1/6 jamestindall.info/skeuomorpholog…Image
There's rising positivity across the Midlands, with admissions doubling over the last week in Birmingham, Leics., Worcs., Derby and also further SW in Gloucs.

Wolverhampton shows the most rapid rise, with admissions tripling.

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There's an unfortunate cluster of non-reporting in West Yorkshire, which is likely down to another massive surge of noro.

But Leeds and the surrounding areas are having a steady rise in admissions, seen here most clearly in Wakefield.

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Read 6 tweets
Dec 9, 2024
There was an article in the FT this weekend, purporting to discover that there has been no increase in illness in Britain - merely an increase in people claiming more generous health benefits.



1/16
I was surprised to see it's by the normally reality-based @jburnmurdoch.

In some ways, the 'mirage' he's arguing against is one of his own making. He candidly admits over-estimating his 2022 view that Britain's ill health made it an outlier in Europe.

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@jburnmurdoch His 2022 view was the same sort of view that @RoryStewartUK expresses here: the idea that we're now post-pandemic, and that Europe recovered but Britain didn't.



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Read 16 tweets
Nov 13, 2024
We've been working on a few changes to the UK Covid PCR positivity map.

One of the changes is quite dramatic, so I wanted to give people an advance view and an explanation before tomorrow's data drops and the map updates.



1/9 jamestindall.info/skeuomorpholog…Image
If you've been following me the last few weeks, you'll know I had concerns about one area misreporting.

This meant the colour scale of the whole map was being distorted by that single anomalous area.

This is what it looked like last Thursday.

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The solution we've chosen is to fix the colour scale at a maximum 40%.

The lowest levels will show in yellow, scaling up to the highest levels in black. Those are areas at or approaching 40% positivity.

This is what the new map looks like, showing last Thursday's data.

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Read 9 tweets
Oct 31, 2024
The PCR positivity map has updated again today, and it takes a bit of deciphering this time.

I'll talk (tweet? twalk?) you through it.



1/11 jamestindall.info/skeuomorpholog…Image
Initially it looks as though the map reflects the reduced positivity reported by UKHSA this week, down to 11.32%, in line with the decline shown by NOIDs on Monday.

But as always the devil is in the detail.

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A comparison of this week's map with last week's looks like things have calmed down a lot.

But the colour scaling is skewed by one extreme outlier reporting nearly 100% posivity.

I'll return to that outlier later in the thread.

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Read 11 tweets
Oct 22, 2024
The UKHSA dashboard has been 'refreshed'.

This is what it looks like now.

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The first thing I want to note is that the refresh has broken all the links on the Covid PCR positivity map.

Please note, the data is still there; it just requires a bit of work to get it easily accessible again.



2/6 jamestindall.info/skeuomorpholog…Image
The map itself is still working fine, and displaying the correct and up-to-date positivity for each area.

But you can't at the moment click on the name of the county to see the underlying data for each area. We'll fix that asap.

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Read 6 tweets
Sep 6, 2024
I've been working with @atomless on a new public tool to help people in England work out what's going on in their local area covid-wise.

It's an interactive map of PCR positivity. 🧵>>>

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jamestindall.info/skeuomorpholog…
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@atomless You might remember the old UKHSA dashboard had maps of case rates, useful for estimating local risk.

Those maps were one of the tools to help us "live with covid". Alas they're gone, and owing to lack of testing, case rates are next to useless.

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@atomless So we've built a new map using the one piece of local data that remains a useful indicator of prevalence. We hope it will help people, particularly those at greater risk, to remain safe.

As this data is only available at local authority level, the map shows LA boundaries.

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Read 11 tweets

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