Vipin M. Vashishtha Profile picture
Sep 22, 2024 33 tweets 10 min read Read on X
What triggers neuroinflammation?
Why is our brain so prone to inflammation?

🔥 A recent pathbreaking study explains the molecular mechanisms that trigger neuroinflammation. It shows exactly why neuroinflammation & neurodegeneration are so common. 1/ Image
But before we delve into this new discovery, let’s glance over a new study linking SARS-CoV-2 & later development of neurodegenerative brain disorders by inducing amyloid aggregation of proteins in human CSF & result in soluble protein depletion. 2/

biorxiv.org/content/10.110…
Image
Now coming back to this extraordinary research. We know that all living cells teem with RNA that relay genetic messages to keep cells functioning. But these necessary molecules can also set off cellular alarms. 3/ Image
The long twisted-together strands of RNA in viruses, for instance, are a tell-tale sign of an invader and the human immune system triggers inflammation in their presence. 4/ Image
Let's assume a X-virus carries double-stranded RNA (dsRNA) instructions. After the X virus deposited it’s RNA, the viral dsRNA is immediately detected by a family of sensors inside the cell called pattern recognition receptors (PRRs), like TLR3 5/

H/t: @BrainInflCollab Image
@BrainInflCollab TLR3 stimulation by viral dsRNA makes Interferons (IFNs), a pro-inflammatory proteins made and released by host cells in response to the presence of pathogens such as viruses, bacteria, parasites or tumor cells. 6/ Image
@BrainInflCollab But how immune system could tell the difference between disease-causing viral RNA & our own normal RNA.

Now, that question led researchers in a surprising direction—the study of brain diseases including Alzheimer's, amyotrophic lateral sclerosis (ALS) & lupus brain fog 7/ Image
@BrainInflCollab The results suggest that the incorrect sensing of our own RNA in the brain may be to blame for chronic inflammation in conditions like these. 8/ Image
@BrainInflCollab Scientists have long known that immune molecules responsible for recognizing viruses, known as pattern recognition receptors (PRRs), can detect viral double-stranded RNA structures, which form when two complementary RNA strands bond together. 9/

nature.com/articles/s4139…
Image
@BrainInflCollab The researchers initially studied if the RNA modifying enzyme ADAR1 could target viral dsRNAs and alter the course of viral infection.

*Here ADAR1 is the key.

What’s it & how it functions? 10/
Image
Image
@BrainInflCollab ADAR1 is an RNA-editing enzyme that performs a variety of functions, including editing dsRNA: converts adenosine to inosine. This process can disrupt dsRNA structures & modulate RNA metabolism. ADAR1 deficiency results in inflammatory diseases 11/

mdpi.com/2073-4425/7/12…
Image
@BrainInflCollab Another researcher at the same time discovered that mutations disrupting the function of ADAR1 cause the autoimmune disease Aicardi-Goutières syndrome (AGS), in which the immune system attacks healthy brain cells. 12/

. ninds.nih.gov/health-informa…
Image
@BrainInflCollab These surprise findings suggested that ADAR1 was not only important in viral infection but was critical for keeping biological peace in the body in other ways. 13/
@BrainInflCollab So, it was really interesting that not having this RNA editing protein would suddenly cause such severe symptoms in the brain, even when there was no virus around. 14/
@BrainInflCollab It made the researchers really curious what the protein is doing to keep us healthy separately from its role in virus infection. 15/
@BrainInflCollab The team earlier discovered that ADAR1-mediated modifications made to our own dsRNA molecules keep PRRs (pattern recognition receptors) from constantly triggering inflammation in healthy tissues. 16/

cell.com/cell/fulltext/…
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@BrainInflCollab That finding satisfied some of the researchers’ curiosity about how PRRs avoid flagging healthy human RNA, but they still don't know exactly how ADAR1 works to hide human RNA from these receptors. 17/
@BrainInflCollab They wanted to find out why the symptoms of AGS were mostly in the brain, when RNA is found throughout the body. 18/
@BrainInflCollab If mutations in ADAR1 make the immune system recognize RNA in the brain and trigger inflammation, why didn't it also cause similarly high levels of inflammation in the heart, the liver, the blood and elsewhere? 19/ Image
@BrainInflCollab In the current study, the researchers engineered stem cells to lack ADAR1 and then coaxed both normal stem cells and those without ADAR1 to develop into neurons and other cell types. 20/
@BrainInflCollab They discovered that neurons, compared to other cells, have far more long double-stranded RNA (dsRNA) structures like that found in viruses. 21/
@BrainInflCollab Without ADAR1, most cells had just small amounts of dsRNA for PRRs to flag as dangerous. Neurons, on the other hand, had a lot. Without ADAR1 to disguise the RNA, PRRs immediately triggered inflammation in neurons. 22/ Image
@BrainInflCollab In turn, that inflammation can increase levels of PRRs, exacerbating the response in a difficult-to-stop cycle. So, a cascade of events led to high production of Interferons 23/
If the human dsRNA is not edited by an enzyme (ADAR1), then it will stimulate large amounts of type 1 interferon (IFN) production in the CNS.

This might be the cause of (or a contributing factor for) many neuroinflammatory and neurodegenerative interferonopathies 24/ Image
Once you get this initial spike in inflammation, whether it's due to a virus or to an autoimmune reaction, you can get locked into this loop where pattern recognition receptors keep finding RNA and then you make more PRRs and more IFNs. 25/
This likely explains what occurs in the brains of people with AGS, but also hints at a possible mechanism for the hard-to-stop inflammation seen in conditions like lupus brain fog, ALS, and Alzheimer's disease. 26/
To try combating inflammation in their isolated neurons, the team decreased levels of free-floating dsRNA in cells.

While this did decrease inflammation, it also led to another surprise: the neurons suddenly became more susceptible to infections with Zika & HSV viruses. 27/
The researchers realized that it's actually important for your neurons to have this low-level inflammation. 28/
This minor inflammation triggered by RNA in the brain takes on the role of a pilot light on a stove—it keeps the immune system activated and ready to react more quickly when there is an invading virus. 29/
In textbooks, we've learned that PRRs are sitting around waiting for pathogens. But this research is suggesting that maybe these molecules are always sensing some of our own RNA and keeping inflammation turned on at a very low level. 30/

nature.com/articles/s4139…
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Science is addictive. Rather than be discouraged by all the surprises in their study, they are more motivated than ever to understand the complex interplay between RNA and immune responses in the brain—and elsewhere. 31/ Image
The neurodegenerative diseases are the last frontier of biomedicine where development of therapeutics has been confounding and slow.
For many of these diseases, if we can harness the immune system in the right way, we might see a breakthrough. 32/32 Image
Here is the link to the study 👇

science.org/doi/10.1126/sc…

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More from @vipintukur

Feb 6
New study suggests #LongCOVID may involve disrupted cortisol rhythms, not just inflammation.

Patients showed:
• Reduced morning cortisol
• Elevated evening levels
• Flattened daily cortisol cycle

➡️ Indicating hypothalamic–pituitary–adrenal (HPA) axis dysfunction. 1/ Image
Prospective study of post-COVID patients:

➡️ Compared with healthy controls,
✔ Long COVID patients had blunted morning cortisol peaks
✔ Higher evening cortisol
✔ Loss of normal circadian pattern

Blood cortisol alone failed to detect these changes. 2/ Image
Key insight:

➡️ Salivary cortisol profiling may be a more sensitive marker of stress-system dysfunction in LongCOVID than standard blood tests.

➡️ HPA axis disruption could underlie:
• Fatigue
• Brain fog
• Sleep disturbance
• Dysautonomia. 3/ Image
Read 5 tweets
Feb 5
Brain Fog after COVID-19: What’s driving it?

➡️ New review highlights that persistent cognitive symptoms in COVID survivors are strongly linked to pro-inflammatory cytokines and blood–brain barrier (BBB) dysfunction.

➡️ Key culprits include IL-6, TNF-α, IL-1β, IL-8, IL-13 and MCP-1 — many remain elevated months after infection.

🔥 COVID-19 is not just a respiratory disease.

➡️ Evidence suggests cognitive impairment can occur due to:

• Systemic inflammation
• Neuroinflammation
• Microvascular injury
• Persistent immune activation
• BBB disruption

➡️ These mechanisms may explain prolonged attention, memory & executive dysfunction. 1/Image
Cytokine signature of cognitive impairment in #LongCOVID:

🔹 Acute phase → IL-6, IL-1β, CXCL10 rise
🔹 Post-acute → Persistent IL-6, TNF-α, MCP-1
🔹 Long phase (>6 months) → IL-6, IL-13, IL-8 linked with “brain fog”

Inflammation clearly outlives the infection.

➡️ Blood–brain barrier disruption appears central in post-COVID cognitive decline.

Markers suggesting BBB injury:
• GFAP
• Neurofilament light chain
• MMP-9
• S100β

➡️ BBB leakage may persist in patients with cognitive symptoms even >1 year. 2/Image
Blood–brain barrier disruption appears central in post-COVID cognitive decline.

➡️ Markers suggesting BBB injury:
• GFAP
• Neurofilament light chain
• MMP-9
• S100β

➡️ BBB leakage may persist in patients with cognitive symptoms even >1 year.

Post-COVID cognitive deficits often affect:

✔ Attention
✔ Working memory
✔ Executive function
✔ Processing speed

➡️ Deficits may start as inflammatory-driven dysfunction but can evolve into persistent neuronal/glial injury.

Early cognitive rehabilitation may be crucial. 3/Image
Read 4 tweets
Jan 24
Post-COVID fatigue isn’t just subjective.
Using advanced MRI, researchers found real changes in brain blood flow and oxygen metabolism in people with Post-COVID-19 Syndrome (PCS) after mild infection.

➡️ Key finding:

PCS patients showed increased oxygen metabolism in the hippocampus (memory hub) but reduced metabolism in the anterior cingulate cortex (ACC) — despite no visible brain atrophy. 1/Image
Why this matters:

➡️ Higher hippocampal metabolism was linked to better cognitive performance, suggesting a compensatory response to maintain thinking and memory in PCS. 2/ Image
In contrast, lower anterior cingulate cortex (ACC) metabolism correlated with:

• depressive symptoms
• reduced motivation
• higher inflammatory & glial markers (TNF-α, GFAP)
➡️ pointing to immune-driven neurovascular uncoupling. 3/ Image
Image
Read 4 tweets
Jan 22
Why do some people feel exhausted long after COVID-19?

➡️ New brain-imaging research shows that even after mild COVID, people with persistent fatigue can have subtle but real changes in brain structure.

➡️ These changes are not large or widespread, but tend to appear in connected brain networks, especially areas involved in attention, decision-making, and sensory processing. 1/Image
Image
Importantly, the brain regions affected overlap with areas that naturally express TMPRSS2, a protein that helps SARS-CoV-2 enter cells — suggesting certain brain circuits may be more vulnerable to the virus. 2/ Image
The study also links these changes to brain chemical systems involved in mood, energy, and cognition (serotonin, acetylcholine, glutamate, and cannabinoids). 3/ Image
Read 4 tweets
Jan 19
COVID-19 doesn’t just affect the lungs — it can disrupt how cells produce energy. New research shows that COVID-19 alters the genetic “switches” that control mitochondria, the structures that power our cells. 1/ Image
By comparing people who died from severe COVID-19, those who recovered, and healthy individuals, researchers found lasting changes in how mitochondrial genes are regulated. These changes were most prominent in genes involved in energy production and metabolism. 2/ Image
Importantly, people with COVID-19 showed abnormally high levels of proteins that control mitochondrial structure and stress responses, suggesting long-term damage to the cell’s energy system. 3/ Image
Read 5 tweets
Dec 26, 2025
#LongCOVID (LC) shares striking symptom overlap with hypermobility spectrum disorders (HSD/hEDS): fatigue, brain fog, dysautonomia, pain—especially in women.

➡️ A new case series explores whether some “intractable” LC may reflect undiagnosed hypermobility disorders.

➡️ Five women with persistent LC symptoms were evaluated at an hEDS/HSD clinic.
All met Beighton score criteria for hypermobility.

➡️ 4 diagnosed with hEDS, 1 with HSD
➡️ 3 had dysautonomia

None had prior hypermobility diagnoses. 1/Image
All patients carried MTHFR polymorphisms (C677T or A1298C)—recently linked to hEDS/HSD.

➡️ Several also showed features of mast cell activation, suggesting immune dysregulation may unmask latent connective tissue disorders after SARS-CoV-2 infection.

➡️ Targeted management (physical therapy, methylfolate/B12, mast cell stabilization, pain interventions) led to clinical improvement in all cases.

🔑 Takeaway: Consider hEDS/HSD in women with refractory Long COVID, especially with multisystem pain and dysautonomia. 2/Image
This case series suggests that some patients with severe, persistent #LongCOVID—especially women—may have previously undiagnosed hypermobility disorders (hEDS/HSD).

➡️ Five women with refractory LongCOVID symptoms were found to meet criteria for hypermobility, often with dysautonomia, mast cell–related features, and MTHFR polymorphisms.

➡️ Targeted management led to clinical improvement, highlighting the need to consider hEDS/HSD in patients with intractable Long COVID symptoms. 3/
Read 4 tweets

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