Zdenek Vrozina Profile picture
Feb 16 21 tweets 3 min read Read on X
With longer duration of Long COVID, some key brain connections become weaker - especially those linked to prefrontal regulatory areas.
At the same time, other connections become stronger.
A new fMRI study shows this reflects a progressive reorganization of how brain networks communicate🧵
The study didn’t just look at isolated brain regions.
It examined how entire brain networks coordinate during cognitive effort - because performance depends less on single areas and more on how well networks synchronize
That synchronization was disrupted in Long COVID.
The main problem wasn’t damage to one function, but impaired regulation - the brain’s ability to detect what matters and shift efficiently into task-focused mode.
The most affected system was the salience network.
This network acts as a central switchboard.
It detects important stimuli or conflicts and shifts the brain between internal processing and active performance states.
In Long COVID, this network showed weaker connectivity with the rest of the brain - especially after prior mental exertion.
This suggests reduced capacity to regulate and coordinate activity under cognitive load.
Another key system involved was the central executive network.
It includes the prefrontal cortex and basal ganglia and supports planning, working memory, response selection, and filtering of distractions.
Deficits in this network produce a characteristic pattern.
Slower responses, difficulty filtering competing inputs, reduced ability to maintain task rules.
This reflects impaired regulatory control rather than isolated memory loss.
A crucial part of the study design was that brain activity was measured during two consecutive cognitive challenges.
The second run captured the brain after prior mental exertion.
During the second run, connectivity deficits became more widespread and new abnormal network patterns emerged.
This indicates that regulatory dysfunction worsens under cognitive stress.
At the same time, some regions showed increased connectivity.
Most notably the angular gyrus - an area integrating visual, language, and motor information.
The authors interpret this as a compensatory response.
Compensation does not mean the brain is functioning normally.
It usually means the opposite.
When core regulatory circuits weaken, the brain recruits alternative pathways to maintain performance.
These alternative pathways are less efficient and more energy demanding.
In simple terms -
the brain works harder to achieve worse results.
This aligns closely with what many patients describe.
Needing intense concentration for tasks that used to feel automatic.
Time dependent findings were especially important.
With longer illness duration, key regulatory connections continued to weaken - particularly those linked to prefrontal control systems!
Meanwhile, connections in visual and language networks became stronger.
This pattern suggests ongoing network adaptation to compensate for regulatory dysfunction.
Sum:
Long COVID has a measurable neurobiological signature in how brain networks coordinate during cognitive effort - and mental exertion amplifies these differences.
This pattern reflects dynamic reorganization of brain networks over time, rather than a static or purely residual condition.
Barnden at al., Impaired brain intrinsic connectivity in long COVID during cognitive exertion revealed by independent component analysis. Scientific Reports 2026. nature.com/articles/s4159…
This study fits a broader pattern seen across Long COVID research - persistent biological activity has been documented - including viral protein persistence and immune dysregulation - along with parallels to other chronic infections.
What is concerning here is the evidence of ongoing brain network remodeling over time.
This suggests a dynamic process in which regulatory circuits weaken while compensatory pathways strengthen.
The biggest unknown is scale - especially in younger populations/kids.
Long COVID likely exists on a spectrum, and it remains unclear how many people experience these network-level changes - especially beyond the most severe cases. @szupraha @ZdravkoOnline @adamvojtech86
Large national education datasets consistently report declines in literacy and numeracy outcomes among school-age children after the pandemic period.

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More from @ZdenekVrozina

Feb 17
One of the most important recent studies on post-COVID biology delivers a concerning message.
SARS-CoV-2 doesn’t just affect immune cells.
It can leave long-lasting changes directly in the immune proteins circulating in our blood.🧵
Think of the immune system in three layers.
immune cells (T, B, NK…)
signaling molecules
effector proteins - antibodies and complement
This study shows persistent changes in the deepest layer - the effector proteins themselves.
Researchers analyzed blood samples from more than 400 people after COVID-19.
They identified hundreds of chemical alterations in proteins - called ncAA modifications.
It’s about proteins becoming chemically different.
Read 14 tweets
Feb 16
Reinfection during the Omicron era is associated with about twice the risk of a documented long COVID diagnosis in children. Online September 2025, print issue February 2026🧵
This is a large US cohort study using data from 40 pediatric hospitals and including 465,717 children and adolescents (<21 years).
It compares the risk of long COVID (PASC) after
a first SARS-CoV-2 infection
a reinfection during the Omicron era.
Reinfection significantly increases the risk of long COVID in children.
PASC diagnosis rates
~904 cases per million after first infection
~1,884 per million after reinfection
Relative risk
≈ 2× higher after reinfection (RR 2.08).
Read 12 tweets
Feb 16
Which brain circuits were most affected in this study - and what might that mean in everyday life?
The study shows something fundamental - reduced regulatory capacity of the brain. The problem is coordination, not character🧵
The most affected system was the salience network
(insula + anterior cingulate cortex).
Think of it as the brain’s regulatory switch.
It evaluates what is important, controls attention, and shifts the brain between rest and performance modes.
When this network becomes dysregulated, the result is reduced capacity to regulate mental load.
Faster overload, lower tolerance to distraction, increased irritability under fatigue, and difficulty sensing internal limits.
Read 18 tweets
Feb 13
A new macaque study looked at how immune memory forms after infections with different SARS-CoV-2 variants.
The main pattern is familiar from other viruses -
immune imprinting tends to stay biased toward earlier variants, even after later infections.🧵
The model is useful because it allows sequential infections under controlled conditions (Wuhan - Delta - Omicron), something that’s hard to observe clearly in humans.
Omicron as a primary infection = relatively weak new immune imprint
After first Omicron infection in macaques -
variant-specific anti-Omicron RBD antibodies developed slowly
overall immunogenicity was lower
T-cell responses were also weaker.
Read 10 tweets
Feb 12
A new study in Neuron links nuclear pore breakdown to TDP-43 pathology in ALS and related dementias.
This pathway is especially relevant because SARS-CoV-2 can both cleave TDP-43 and disrupt nuclear transport - potentially hitting the same vulnerability from two directions.🧵
The nuclear pore is a critical cellular gate.
It regulates the movement of RNA and proteins between the nucleus and cytoplasm.
In ALS and some dementias, this gate is known to fail - and TDP-43 leaves the nucleus and accumulates in toxic aggregates.
But why the pore breaks down has been unclear.
The study identifies a key player - VCP.
Normally, it acts as a cellular cleanup system, removing damaged proteins.
The problem arises when it becomes overactive.
Read 16 tweets
Feb 11
A new study in Frontiers in Medicine analyzed 959 hospitalized COVID-19 patients (pre-vaccination).
It shows that T cell counts at admission strongly predict severe outcomes and mortality.
This isn’t just about inflammation - adaptive immunity is central🧵
Patients with CD3 T cells ≤ 666/mm³ had
2.3× higher risk of needing ventilatory support
2.4× higher risk of in-hospital death
CD4 ≤ 359/mm³ was associated with
2.8× higher risk of death
These associations remained independent after adjustment.
The study supports a model in which
T-cell responses (especially CD3/CD4) are weakened
Adaptive immunity fails to adequately control the virus
The body compensates through hyperactivation of innate immunity
The result is severe disease
Read 5 tweets

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