Áine O'Toole Profile picture
Virus genomic epidemiology PhD. Hosts, pathogens & global health MSc. @NetworkArtic, Rambaut Lab, Edinburgh Uni. She/her
Jul 8, 2021 8 tweets 7 min read
cov-lineages.org has had a makeover, thanks to the website wizardry of @DrEmilyScher!
@arambaut @EvolveDotZoo Find the latest lineage data for every @PangoNetwork lineage at cov-lineages.org/lineage_list.h…
You can now search the table for lineage name, or any of the other fields to pull out lineages by metadata.
Feb 12, 2021 9 tweets 7 min read
Latest SARS-CoV-2 lineage of concern report available at cov-lineages.org/global_report.…. We're still updating this daily, so most recent information can always be found there. @arambaut @EvolveDotZoo @viralverity @MOUGK B.1.1.7 has been reported in 82 countries (63 of which have sequences on GISAID). The vast majority of top destinations from London in October now have reported cases of B.1.1.7, many of which have also shared sequences online.
Feb 5, 2021 10 tweets 8 min read
Today's SARS-CoV-2 lineage of concern report for 2021-02-05 available at cov-lineages.org/global_report. @arambaut @viralverity @EvolveDotZoo @MOUGK 75 countries have reported cases of lineage B.1.1.7, 59 of which have reported sequences on GISAID. Newly added to the report today are the Cayman Islands (gisbarbados.gov.bb/blog/carpha-co…) and Barbados (caymannewsservice.com/2021/01/uk-cov…).
Feb 4, 2021 9 tweets 8 min read
Latest SARS-CoV-2 lineage of concern report for 2021-02-04 available at cov-lineages.org/global_report.
@arambaut @viralverity @EvolveDotZoo @MOUGK @edwardcholmes 73 countries have reported cases of lineage B.1.1.7, 58 of which have reported sequences on GISAID.
Feb 3, 2021 8 tweets 7 min read
Today's SARS-CoV-2 lineage of concern report for 2021-02-03 available at cov-lineages.org/global_report.…
@arambaut @EvolveDotZoo @viralverity @MOUGK @edwardcholmes 73 countries have reported cases of lineage B.1.1.7. Local transmission has been reported today in Bulgaria (sofiaglobe.com/2021/02/03/bul…) and South Africa ().
Feb 2, 2021 9 tweets 7 min read
Latest SARS-CoV-2 lineage of concern report for 2021-02-02 now available at cov-lineages.org/global_report.… @arambaut @viralverity @MOUGK @EvolveDotZoo @edwardcholmes 73 countries have reported cases of B.1.1.7 (56 of which have sequences on GISAID).
Feb 1, 2021 9 tweets 8 min read
Today's SARS-CoV-2 lineage of concern report for 2021-02-01 now available at cov-lineages.org/global_report.…
@arambaut @viralverity @EvolveDotZoo @MOUGK @edwardcholmes Image A total of 73 countries have reported cases of B.1.1.7 (55 of which have sequences on GISAID). ImageImage
Jan 31, 2021 9 tweets 7 min read
Today's SARS-CoV-2 lineage of concern report for 2021-01-31 now available at cov-lineages.org/global_report.… @arambaut @viralverity @MOUGK @EvolveDotZoo @edwardcholmes A total of 73 countries have reported cases of B.1.1.7 (55 of which have sequences on GISAID).
Jan 30, 2021 10 tweets 9 min read
Updated SARS-CoV-2 lineage of concern report for 2021-01-30 now available at cov-lineages.org/global_report.…
@viralverity @arambaut @EvolveDotZoo @MOUGK @edwardcholmes We report 72 countries with cases of B.1.1.7 (53 of which have sequences on GISAID). Georgia and Slovenia both report cases of B.1.1.7, however the report from Slovenia is informed by SGTF which will be further tested by sequencing. businessworld.in/article/Georgi… gov.si/en/news/2021-0…
Jan 29, 2021 9 tweets 7 min read
Latest SARS-CoV-2 lineage of concern report for 2021-01-29 now available at cov-lineages.org/global_report.
@viralverity @arambaut @EvolveDotZoo @edwardcholmes @MOUGK 70 countries have reported cases of B.1.1.7 (53 of which have sequences on GISAID), no increase from yesterday.
Jan 28, 2021 9 tweets 9 min read
Latest SARS-CoV-2 lineage of concern report for 2021-01-28 now available at cov-lineages.org/global_report. @viralverity @EvolveDotZoo @arambaut @MOUGK @edwardcholmes 70 countries have reported cases of B.1.1.7 (53 of which have sequences on GISAID). New reports today of lineage B.1.1.7 from South Africa, Senegal and Kuwait: , reuters.com/article/health…, reuters.com/article/health…
Jan 27, 2021 9 tweets 8 min read
Updated SARS-CoV-2 lineage of concern report for 2021-01-27 now available at cov-lineages.org/global_report.… @viralverity @arambaut @EvolveDotZoo @edwardcholmes @MOUGK 67 countries have reported cases of B.1.1.7 (50 of which have sequences on GISAID). Report of 2 cases in travellers from the UK in the Gambia (2021-01-14, reuters.com/article/uk-hea…) and sequences on GISAID from Saint Lucia and French department Mayotte.
Jan 26, 2021 9 tweets 8 min read
Latest SARS-CoV-2 lineage of concern report for 2021-01-26 now available at cov-lineages.org/global_report.…
@viralverity @arambaut @EvolveDotZoo @edwardcholmes @MOUGK pangolin assigned B.1.1.7 to 28,993 sequences on GISAID from 47 countries. 27,010 of those sequences are from the UK.
Jan 25, 2021 9 tweets 8 min read
Today's SARS-CoV-2 lineage of concern report for 2021-01-25 now available at cov-lineages.org/global_report.…
@arambaut @viralverity @MOUGK @EvolveDotZoo @edwardcholmes As of today, there are 26,215 B.1.1.7 sequences on GISAID from 47 countries. 24,364 of those sequences are from the UK.
Jan 24, 2021 9 tweets 8 min read
Today's SARS-CoV-2 lineage of concern report for 2021-01-24 now available at cov-lineages.org/global_report.…
@arambaut @viralverity @MOUGK @EvolveDotZoo @edwardcholmes Image As of today, there are 26,080 B.1.1.7 sequences on GISAID from 47 countries. 24,295 of those sequences are from the UK. ImageImageImageImage
Jan 23, 2021 9 tweets 8 min read
Latest SARS-CoV-2 lineage of concern report for 2021-01-23 now available at cov-lineages.org/global_report.…
@viralverity @arambaut @EvolveDotZoo @MOUGK @edwardcholmes pangolin assigned B.1.1.7 to 26,011 sequences on GISAID. There are now 47 countries with public B.1.1.7 sequences. Trinidad and Tobago (2021-01-21) and the United Arab Emirates (23 seqs, earliest sample 2020-11-16) are newly represented by B.1.1.7 sequences on GISAID.
Jan 22, 2021 9 tweets 8 min read
Today's SARS-CoV-2 lineage of concern report for 2021-01-22 now available at cov-lineages.org/global_report.…
@viralverity @arambaut @EvolveDotZoo @edwardcholmes @MOUGK pangolin assigned B.1.1.7 to 24,856 sequences on GISAID. There are now 45 countries with public B.1.1.7 sequences. Latvia (4) is newly represented by B.1.1.7 sequences on GISAID.
Jan 21, 2021 9 tweets 8 min read
Today's SARS-CoV-2 lineage of concern report for 2021-01-21 now available at cov-lineages.org/global_report.…
@arambaut @viralverity @edwardcholmes @EvolveDotZoo @MOUGK pangolin assigned B.1.1.7 to 24,737 sequences on GISAID. There are now 44 countries with public B.1.1.7 sequences. Austria (42), Czech_Republic (10) and Poland (1) are now represented by B.1.1.7 sequences on GISAID.
Jan 20, 2021 9 tweets 8 min read
Updated SARS-CoV-2 lineage of concern report for 2021-01-20 available at cov-lineages.org/global_report.…
@arambaut @viralverity @EvolveDotZoo @MOUGK @edwardcholmes pangolin assigned B.1.1.7 to 22,136 sequences on GISAID, 20,832 of which are from the UK. There are 41 countries in total with sequences assigned B.1.1.7 by pangolin. Newly represented is Argentina (1), sample taken on 2020-12-21.
Jan 19, 2021 9 tweets 8 min read
Latest SARS-CoV-2 lineage of concern report for 2021-01-19 now available at cov-lineages.org/global_report.… @arambaut @viralverity @MOUGK @EvolveDotZoo pangolin assigned B.1.1.7 to 18,070 sequences on GISAID, 16,982 of which are from the UK. There are 40 countries in total with sequences assigned B.1.1.7 by pangolin. Newly represented is Iran (1), report date from 2021-01-05.
Jan 18, 2021 8 tweets 8 min read
Latest SARS-CoV-2 lineage of concern report for 2021-01-18 now available at cov-lineages.org/global_report.…
@arambaut @EvolveDotZoo @viralverity @MOUGK pangolin assigned B.1.1.7 to 17,847 sequences on GISAID, 16,847 of which are from the UK. There are 39 countries in total with sequences assigned B.1.1.7 by pangolin. Newly represented is Peru (1), sample date from 2020-12-31.