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Ryan Seamus McGee Profile picture
Ryan Seamus McGee
@RS_McGee
PhD student at UW. How does selection shape information in genomes and networks? Evo theory, info theory, comp sci, dynamics. Sports analytics. Feathered dinos.
Mar 25, 2020 • 14 tweets • 5 min read
We would like to share an extended SEIR model and easy to use python package for studying population structure, social distancing, testing, tracing, and quarantining—including stochastic implementations of these models on dynamic networks. (thread) Here’s a brief overview, but the model and code are fully documented in the GitHub README. This work is a collaboration with @ocornejopopgen, @evokerr, @mtanaka000, and @CT_Bergstrom.