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Sam Lipworth Profile picture
Sam Lipworth
@SamLipworth
Junior doctor and clinical DPhil student @UniofOxford @lmhoxford interested in infection. Also choral singer.
Feb 23, 2021 • 9 tweets • 3 min read
Introducing Flanker - new preprint with @wtmatlock #liamshaw and @NicStoesser @ModMedMicro biorxiv.org/content/10.110… - github.com/wtmatlock/flan… thread.. Flanker is a reference free tool to faciliate analysis of flanking regions around genes - it extracts sequences around genes of interest then clusters these based on mash distance thresholds (lots of tunable options to customise this)