Petr Svoboda Profile picture
playful scientist cynical biologist nerdy nerd & teacher professor de La Mancha admiring humanity, curiosity & Yossarian Lord of Sealand husband & father
Oct 28, 2024 10 tweets 2 min read
@TomatoFilipi @weblog20 1/n Kvalitni veda potrebuje:

napady
lidi
penize
cas

Administrativa by mela byt schopna starat o ty posledni dve veci, o druhou se starat ve spolupraci s vedci. Vedci by se meli postarat o tu prvni. Stat ma pro tu prvni akorat vykolikovat hriste. CR bude stezi mit dost $$. @TomatoFilipi @weblog20 Kazdy z tech 4 faktoru je samostatny problem, jejichz spolecnym jmenovatelem je svebytna akademicka kultura, kde si administrativa usurpuje vetsi roli, nez by ji mela patrit, zatimco vedu ridi jako cargo cult. Paradoxne to casti akademicke obce vyhovuje a adaptuje se na to.
Sep 8, 2023 11 tweets 4 min read
Neural crest cells are evolution's duct tape for fixing poor design issues. Really. Cardiac septum.
Feb 21, 2023 10 tweets 2 min read
This will be a growing thread with stochastic tips for PhD applications & interviews. Many of them were likely mentioned by others but I see them repeatedly popping up during interviews and some of the issues do a lot of damage to applicant's chances. 1) Regardless how simple your MSc. project was, it can be presented in a scientifically sound way and that's what an interviewer is looking for. A curious highly motivated candidate is able to formulate what was the goal and knows details, strengths and weaknesses of own work.
Feb 6, 2021 11 tweets 2 min read
kde se berou mutac e a jak funguje evoluce viru - thread:

Virus je molekula nukleove kyseliny v obalu z bilkovin. Nukleova kyselina se vehem "zivota" viru zdvojuje 1-2-4-8-16-32-64-128 ... molekul. Pri kazdem JEDNOTLIVEM zdvojeni muze vzniknout chyba. 64->128 je 64 zdvojeni. Pokud bude v populaci 100 000 nakazenych a kazdy kazdy bude nositelem 1000 000 viru, je to 100 000 000 000 viru, take to je 100 000 000 000 replikacnich procesu, a v kazdem muze dojit k chybe - virus je stroj na generovani mutaci. Proc s ho teda virus neznici samotne mutace?
Sep 21, 2020 9 tweets 2 min read
Today at the Faculty of Science @UniKarlova. What a nice day for a PhD state exam. Six of them, actually. :-) Image Three down, three to go. All three passed. :-)
Sep 13, 2020 48 tweets 10 min read
Grotesknim odrazem doby je, jak snadno si clovek snadno splete prohlaseni z parodickych uctu s moznymi vyroky jejich predobrazu. Novinarska satira konkuruje zpravodajstvi. Zpravodajstvi konkuruje satire. Takova komicka apokalypsa. Nebo apokalypsa komiku. :-) Pravda nebo satira? Image
Jul 21, 2020 4 tweets 2 min read
SRC @lborouniversity says: Each hour short of 8 hrs of sleep a night could knock one pt off a person's IQ. It would be easy to lose 15 pts in a week, resulting in a person with an IQ of 100 becoming "borderline retarded."

@AndrejBabis & @KarelHavlicek_ sleep deprivation contest pubmed.ncbi.nlm.nih.gov/21518064/
Jul 14, 2020 8 tweets 3 min read
... what a terrible week for Czech Railroads:
7.7. - heads on collision - 2 dead.
10.7. - side-wise, derailing - no injury
14.7. - nose-to-tail crash - just now ... many injured ... ImageImageImage ... unfortunately, the train driver died and 35 people were injured yesterday. Image
Jul 13, 2020 15 tweets 5 min read
Monday:
7AM power outage > water system failure > electricity check > diagnosed pump failure. The pump is somewhere under water in a 30m deep & 1m wide well with ~10m water column. They must empty it, exchange the pump and pray the well won't collapse and old cables are still OK. This thing is a monster. ImageImage
Jul 4, 2020 12 tweets 7 min read
SCIENCE PILGRIMAGE. What would be your top places a scientist should visit as a humble pilgrim to pay a tribute to history of science of the past? Let's make thread with a collection of places for all branches of science (mine will be biology-centric, what else?) ... St. Thomas Abbey, Brno, Czech Republic
- a place where Johann Gregor Mendel worked out rules of heredity. A Mecca or Santiago de Compostela for biologists, with an original manuscript still on display. They may remove it in order to preserve it though.
en.wikipedia.org/wiki/St_Thomas… Image
Jul 2, 2020 4 tweets 2 min read
Things in our latest work I am proud of:
1) bringing numbers of RNA molecules in a cell back to the game.
2) a concept that molecular mechanisms must adapt to oocyte growth in order to work
3) a PhD student learning herself to microinject to complete this.
shorturl.at/fLNR4 ... when speaking about numbers, I mean particularly this table of nanomolar concentrations of different numbers of molecules in different cell types. It was our Rosetta stone for understanding differences between cells when their sizes essentially double ... Image
Jun 26, 2020 5 tweets 1 min read
Prague -> Bratislava
🐭🐭🐭🐭🐭🐭🐭🐭
wrooooouum! Worst drive ever.5h instead of 3h. Mice survived. Putting them into facility now and packing samples on dry ice.
Jun 19, 2020 12 tweets 3 min read
1/11 Zabil jsem vecer nucen analyzovat video SP (dik @JaroslavKlaus). Do 16:30 OK, reklama na PCR, neni to rocket science, ale musi to byt ciste a dobre. Nesnizuju to. Vysoce kvalifikovana prace. Jako treba slepak. Znamy postup, ale chcete to kvalitne.
shorturl.at/blsET 2/11 sranda zacina 16:30, kde SP prezentuje silne antropocentricky pohled na evoluci "velina" (5' leader TRS). Drzi schema viru s vyrezem chromatogramu sekvence, ze ktereho nelze nic vycist (“to bude dobry, to je barevny a vypada to odborne’”). V tom, co rika potom:
May 29, 2020 6 tweets 2 min read
1/6 Graf 5' UTR (zacatek) SARS-CoV-2 a pozice + frekvence zachycenych mutaci. Zelene je kodujici sekvence prvniho proteinu. Srovnavaci studie se casto delaji na protein-kodujicich sekvencich, protoze se mene meni a jdou tak lepe porovnavat vzdalenejsi organismy. (© @nextstrain). Image 2/6 Sekvenovani casto neni na 5' konci kompletni, zvlast u virovych RNA. Neni to zadna konspirace ani podvod, je to technicka vec. U virovych RNA je ten problem, ze zacatek byva ruzne zamotany do sebe a tvori spoustu smycek, ktere se pro sekvenovani ne vzdy dobre rozpletou.