John Bye Profile picture
27 Feb, 26 tweets, 10 min read
The latest graph and interview from @RealJoelSmalley starts by claiming that the response to covid killed more people than covid itself, and ends with a wild theory that vaccination drove the surge in deaths in January!

Needless to say, there's no real evidence to support this.
First he claims that there have been almost 40,000 deaths over the last year due to denial of healthcare.

Many of them over the summer, when there were no excess deaths!

As he says in his podcast interview, "any analysis is worthless if the data that goes in is not good".
And his data is not good.

Instead of using the five year average, he generates a baseline curve that he believes deaths would have followed in 2020 without covid and lockdown.

But this is based purely on deaths in late January / early February, extended out to the whole year!
This may seem reasonable at first glance, but winter deaths vary massively from year to year depending on the timing and severity of flu season and cold weather.

And in 2019-20 flu season tailed off early, with respiratory disease deaths below normal just before covid hit.
It doesn't follow that all causes deaths would have stayed below normal by a similar margin all year if nothing else had happened.

Summer deaths (as Joel himself says) always fall within a very narrow range.

And his baseline seems to fall well outside of that range!
In fact there were no excess deaths over the summer, and there's no evidence of lots of non-covid excess deaths.

The only reason his graph shows them is because he's comparing 2020 deaths to a lower baseline that's not representative of normal deaths.

He cites an ONS report on non-covid excess deaths in the first wave, and says "it would be unreasonable to assume it stopped in spring".

But data shows that, apart from a small number of heart disease deaths, that's exactly what happened, as the NHS slowly resumed routine work.
And the interview uses a new version of his graph that makes even less sense. Now it only shows denial of healthcare deaths happening BETWEEN covid waves!

If anything the opposite should be true, as access to healthcare is more restricted if hospitals are full of covid patients.
All of this is building up to the big yellow block on the right side of his graph that's euphemistically labelled "unexplained".

The ONS, PHE and NHS all seem pretty clear that these are covid deaths.

But Joel thinks they're wrong...
Unlike some sceptics, he does acknowledge there was a second wave in autumn and early winter.

But he says the surge in late December / early January is "very very difficult to explain", and "the data was telling me it wasn't [covid], it was unnatural".

Spoiler: it was covid.
He says that it's a "really rather peculiar uptick, unexpected in terms of time".

But the timing is very similar to a typical flu season.

It's just the scale that is much, much worse, because covid-19 is more transmissible and more deadly than seasonal flu.
In fact, in his interview with the Pandemic Podcast he actually says that there is ALWAYS a "spike [in all causes deaths] in between the first and second week of January", which he had to work around by replacing his smooth modelled curve with a straight line at that point.
"I thought it was unreasonable, but if you look at the data, you can see it absolutely exists."

An hour later he seems to forget about this, and says he's suspicious of the third wave deaths because he can't fit a nice, neat modelled curve to the growth rate over this period in the same way he could in the spring.

Between the usual spike in deaths at the start of January and regional variations in prevalence, prior infection rates, lockdown tiers, viral strains etc going into the third wave, it's not surprising that his model doesn't fit the data as neatly as it did in the spring.
But based on this, he started looking for alternative explanations. And hit on an odd coincidence that he suggests is causality.

The rise in deaths happened right around the time that vaccinations began.
He's wary of saying it out loud because he's worried about "losing credibility" if he's labelled as anti-vax.

Which is why his Twitter feed is all dog whistles and he waits until an hour into his interview before saying anything.

But he thinks vaccines are killing people.
Of course, the far more likely explanation is that we started vaccinating people in mid-December.

Just before respiratory deaths start to rise every year.

As he says himself, correlation is not causation.
To be fair, there isn't even much correlation in the graphs he shared.

In all of them there's a vague similarity in vaccinations and deaths, but if you look closer the timing and relative sizes of the peaks are completely different in every graph.

There's no consistent pattern.
It also ignores actual studies comparing outcomes for vaccinated and unvaccinated people, which show no surge in deaths after vaccination, and a clear drop in deaths a few weeks later.

This one from Israel, for example.

nejm.org/doi/full/10.10…
Joel pointed out that this study looks at outcomes starting two weeks after vaccination, but it also includes a supplementary data table looking at the whole period from the day of vaccination onwards.

This also shows no sign of worse outcomes following vaccination.
Another sign that there's no connection to vaccination is that the third wave hit different regions in the UK at different times.

This matches the spread of the new strain of the virus, starting in Kent, East London and Essex and then spreading out across the country.
Vaccination is completely the opposite though!

London and the East of England were slowest to vaccinate, but show an early, sharp rise in deaths.

Yorkshire and the North East vaccinated fastest, but deaths there rise later and more gradually.

hsj.co.uk/coronavirus/lo…
All of which strongly suggests his hypothesis is wrong:
- The vaccines are safe and effective.
- Winter deaths were driven by seasonality and new strains of the virus.
- There's no sign of huge numbers of deaths due to denial of healthcare.
- Most excess deaths were due to covid.
Perhaps unsurprisingly, Joel has chosen to block me rather than respond to the issues with his analysis.
PS: the MHRA tracks adverse reactions to the vaccines. Most are mild and only last a day or two.

After 16 million doses only 406 deaths were reported and "review of individual reports and patterns of reporting does not suggest the vaccine played a role".

gov.uk/government/pub…

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More from @_johnbye

31 Jan
Sceptics make wild claims about the number of deaths caused by lockdown, but there's no evidence to support them.

The vast majority of excess deaths last year were directly caused by ("from", not "with") covid-19.

So what do ONS and PHE data and academic studies actually show?
Removing covid deaths, you can see more clearly that despite 10 months of varying levels of restrictions, the only time there have been large numbers of non-covid excess deaths was during the first wave.

Mostly elderly care home residents registered as dying from dementia.
We now know that many elderly people suffering from covid experience confusion and delirium, often without a cough or fever.

This is obviously easily mistaken for other, pre-existing conditions.

The same thing is thought to happen with flu each winter.

bbc.co.uk/news/health-54…
Read 29 tweets
1 Jan
The latest Test & Trace report is out, covering the week before Christmas.

Cases in London and the South East were soaring, and an outbreak of coronavirus at the Lighthouse Lab in Milton Keynes caused further issues in the testing system as demand for tests rapidly increased.
There was another big increase in testing as demand rose, with increasing numbers of quick but less sensitive Lateral Flow Tests being used to screen asymptomatic people.

In total 2.6 million tests were done. But a higher percentage than last week were positive.
If you separate Lateral Flow (which are ONLY used on asymptomatic people) and PCR (which are used on both symptomatic and asymptomatic people) tests, positivity for PCR is back to the peak last seen at the beginning of November, while positivity for LFTs is rising fast now too.
Read 15 tweets
28 Dec 20
It's sad we still need to say this, but false positives are NOT driving rising cases.

In the summer the False Positive Rate (FPR) at lots of labs was below 0.1%.

For example, Milton Keynes' FPR for the ONS Infection Survey was less than 0.04% in July.

ons.gov.uk/peoplepopulati… Image
In fact, when prevalence was low, labs all over the world had less than 0.1% of tests give a positive result.

So their FPR (the % of people they tested who didn't have the virus but got a positive result) must also have been less than 0.1% at the time.

So there's nothing fundamentally wrong with PCR. It doesn't conjure up lots of false positives out of thin air when nobody has the virus.

Any false positives would mostly come from cross contamination or errors, either when the sample is taken or at the lab when it's processed. Image
Read 27 tweets
26 Dec 20
This week's Test & Trace report covers the week to December 16th, when cases in London and the South East were surging and falls in the North and Midlands levelling off.

There were also issues in the Lighthouse Lab system, apparently caused by a shortage of reagents. Image
As demand soared, almost 2 million tests were done in a week in England, which is amazing when you consider we struggled to test a few thousand people 9 months ago.

Despite this, the number of positive results rose much faster than testing, with positivity rates climbing again. ImageImageImageImage
Breaking it down by type of test done:

The new Lateral Flow Tests are still only being used on people without symptoms, so positivity is very low but rose sharply this week.

Some (but not all) PCR tests are used on people with symptoms so have higher positivity. Over 10% again. Image
Read 19 tweets
24 Dec 20
The interim report on the Liverpool community testing trial is now out, with more complete results for the sensitivity of the tests, as well as lots of additional information and data about the trial.

h/t @angelaraffle and @scb909

liverpool.ac.uk/coronavirus/re…
Firstly, more results have been released, showing the Innova LFTs only found 40% of people who were PCR positive.

More relevantly, they missed 17.6% of people positive at Ct 20 or lower, and 45.5% at Ct 20-25.

So overall they missed a third of people with "higher viral load". Image
Interestingly though, when they went back and reassessed test results based on photos of the devices (with a third person checking if the result differed from the initial one), their performance improved significantly. Finding 83% of PCR positives at or below Ct 25. Image
Read 13 tweets

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