As a researcher working with data like this, I'm aware there is a balance between the needs to plan and research, and to reassure people about what happens to their data - particularly health data which was given in the expectation of confidentiality. 1/

theguardian.com/commentisfree/…
There has been a growth - particularly during the pandemic - of massive databases seeking to include as much of the UK population as they can. And COPI rules have (temporarily) removed many of the protections people believed they had. 2/
I believe that data belongs to the people it concerns. So databases like this are best set up and run locally, with local involvement - people and organisations - to ensure data is used in a way that benefits the people it covers. 3/
Equally, the right to opt out is sacrosanct - and I am concerned that some databases do not honour this (because COPI says they don't have to). 4/
Perhaps the opt-out could be more nuanced? "I'm happy to have my data used for planning and research, but not sold" for example. Or defining the types of organisation that it should be shared with (eg for research), or levels of pseudonymisation. 5/
There's a difference between "pseudonymisation at source" and databases that ingest identifiable data and send it to NHS Digital's Privitar tool for example. And other differences in how reversible the pseudonymisation is (clearly irreversible is an extra layer of security) 6/
Local databases have other advantages too - the way we use data in real life isn't like what traditional researchers can be used to. People use data only in as much as it fits their workflow. 7/
Different workflows in different places mean that the data can look very different - despite officially its definition being the same. ie you can't look at data without considering where it came from and why it was entered. 8/
Bringing local people with you is therefore important for all sorts of reasons - and it feels like this is what's at risk of being lost here. To the point where I find myself wanting to opt out, but in a way that doesn't keep my data from being used locally. 9/
And unfortunately that option is not available - so I'm back with a binary choice - and this is going to affect a lot of people.
No answers here unfortunately! 10/
Lastly, I think transparency is key - everyone should know exactly what data (of theirs!) has been given out and to whom and why. Hopefully this prevents some of the shader options. 11/
COI: As alluded to at the top, I work on the Connected Bradford database at @CityOfResearch - I believe we do it right, and I hope this controversy helps ignite an interest in how routine data is used. n/

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More from @LawtonTri

30 Jan
Updated chart of probable hospital-acquired COVID-19
(diagnosed over 7 days after hospital admission)

English Acute Trusts with over 300 total cases since August 2020

Can we share learning points from the Trusts near the bottom? Image
Updated chart (data to 31st Jan 21)

Probable hospital acquired COVID-19 (diagnosed >7 days after admission).
English Acute Trusts with over 300 cases since August 2020

Chart shows percentage of cases that are probable HAI, and total case numbers. Image
As requested by @elinlowri - were busier trusts worse?

(divided total cases by acute overnight beds open September 2020)

Answer appears to be the opposite (though frankly it's a pretty poor correlation and looks strongly affected by a few outliers)

1/ Image
Read 7 tweets
11 Jan
A quick thread on running in masks

I should start by saying I'm not advocating for masks outside; but like all good scientists I reserve the right to change my opinion.

However there are rumours UK rules may change, and I've done this before...

1/

yorkshireeveningpost.co.uk/health/coronav…
So after being tagged in some discussions I ran home today testing three different masks to remind myself of my original run (which was in a "nan's curtains" 3-layer cloth mask)

But first a few tips on masked running:

2/
It feels weird at first. It restricts flow to a degree and can reduce top speed.
However, it does not drop your oxygen levels!

It helps to breathe in more slowly (ie change breathing pattern to in slow, out quick) so you can still take deep breaths.

Start slow and build up.

3/
Read 10 tweets
4 May 20
There is an urban myth in anaesthesia about August Bier, his assistant Hildebrandt, and the invention of spinal anaesthesia. We were having a giggle about it on Covid ICU this weekend – but it turns out the truth is so much better:

(a thread, edited from the paper) (1/n)
At 7:38 p.m. I injected 0.5 cc. of a 1 per cent solution of cocaine. This resulted in Hildebrandt experiencing a feeling of warmth in both legs.

After 7 minutes: Needle pricks in the thigh were perceived as pressure; tickling of the the sole of the foot was barely felt. (2/n)
After 8 minutes: A small incision in the skin of the thigh was felt as pressure; introduction of a large, blunt, curved needle into the soft tissues of the thigh produced no pain at all.

(7 minutes is how we often check. 8 is a reasonable test of anaesthesia) (3/n)
Read 19 tweets

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