Marc Somssich Profile picture
Oct 18, 2021 13 tweets 8 min read Read on X
#PlantScienceClassics #7: The ZigZag Model.15 years ago @jonathandgjones & Jeff Dangl published their @nature review integrating Pattern/PAMP-Triggered Immunity (PTI) & Effector-Triggered Immunity (ETI) into one unified model of ‘The plant immune system’. doi.org/10.1038/nature… A picture showing Jeff Dangl and Jonathan Jones together, in
In the 1980s, with plant molecular biology still in its infancy, the plant immune system was not understood very well at all. Dangl, at the time an immunologist working on mouse/human cells, remembers: ‘I had never considered that plants could recognize pathogens’.
But this fact, that the molecular mechanisms of the plant immune system were still basically a ‘black box’, is exactly what got Dangl interested and motivated to switch fields, and join the group of Klaus Hahlbrock at the @mpipz_cologne to work on plant immunity. An excerpt from the PNAS article 'Profile of Jeffery L. Dang
Jones was already working in the plant field @TheSainsburyLab during this time, more specifically on #transposons in maize. And it was this background in #transposon biology which led him to use transposon-tagging experiments to isolate & characterize plant resistance (R) genes.
So when the first plant R genes were then isolated & characterized in 1994/5, Jones & Dangl (or Jongl, if you prefer their celebrity couple name) were right there in the mix, with Jones publishing on the tomato Cf-9, & Dangl the Arabidopsis RPM1 R gene, both in @ScienceMagazine. The title page of Jones' 1994 Science paper 'Isolation of thThe title page of Dangl's 1995 Science paper 'Structure of t
At the time, the leading hypothesis was that there is one R protein to sense or recognize one corresponding pathogen virulence factor, but at the same time there appeared to be too few R genes in Arabidopsis for this to be true. ‘a repertoire problem’, as Dangl remembers.
To overcome this problem, Jones & Dangl developed the #GuardHypothesis, published 20 years ago in @nature, suggesting that each R protein actually guards a specific host protein, & reacts to perturbances of this protein – irrespective of which pathogen is causing this damage. The model for the Guard Hypothesis: 'The guard hypothesis fo
The guard hypothesis describes the action of the intracellular NB-LRR R proteins involved in ETI. But with the description of the flg22/FLS2 & EF-TU/EFR systems in the 2000s, it became clear that there was a second part of the plant immune system, that acts in a different way. Title page of the 2004 review 'Plants and animals: a differe
This part involves plasma-membrane localized receptors that sense extracellular elicitors, and seems to more resemble the animal PAMP/PRR systems (PTI). So PTI & ETI appeared to be separate pathways, and with their 2006 paper, Jones & Dangl integrated them into one unified model.
In the model,(Phase1) a pathogen is detected via its PAMPs by PRRs, triggering PTI. (Phase2) A pathogen evading detection & releasing effectors, suppresses PTI. (Phase 3) These effectors are then recognized by NB-LRRs, resulting in ETI,an amplification of PTI & stronger response. The zigzag model figure from the 2006 Nature paper, showing
The zigzag model had a huge impact on the field, most readily demonstrated by >10.000 citations. But like all models, it still evolves. @jonathandgjones has recently published an update, again in @nature, showing the high interconnectedness of PTI/ETI: doi.org/10.1038/s41586… A screenshot from Google Scholar, showing 10874 citations fo
And @Billion_of_Gods has also given a very nice update on the PTI/ETI-interrelation and the evolution of the zigzag model in his ‘What’s new in MPMI!’ @MPMIjournal seminar. See here: apsjournals.apsnet.org/whatsnew_kents… Screenshot of the opening slide of Kenichi Tsuda's talk on t
Further reading: @PNASNews Profiles on Jonathan D. G. Jones: doi.org/10.1073/pnas.1… and Jeffery L. Dangl: doi.org/10.1073/pnas.1…

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More from @somssichm

Mar 26, 2023
#PlantScienceClassics #18: Ethylene triple response mutants. 35 years ago Anthony Bleecker et al. exploited the triple response phenotype to identify the #ethylene receptor ETR1. The ethylene story is another example for #PlantBlindness @NobelPrize. doi.org/10.1126/scienc… The Science cover picture of the 1988 issue shows the triple
Ethylene is a gaseous #phytohormone with a wide range of roles from plant development to immunity. Ernest Starling in 1905 defined a hormone as mobile chemical messenger synthesized by a multicellular organism, that has physiological activity distant from the site of synthesis. Excerpt from Ernest Henry Starling’s 1905 paper “The Cro
The effect of ethylene on plants was first noted in the 1900s, when it leaked from illumination gas used in lamps and affected plants nearby. But it was Dimitry Neljubow, who in a series of experiments identified ethlyene as the active substance in the illumination gas in 1905.
Read 17 tweets
Oct 12, 2022
#PlantScienceClassics #17: The Mildew Resistance Locus O (MLO). 80 years ago Rudolf Freisleben & Alfred Lein created the first powdery mildew resistant barley plant. 30yrs ago the gene was mapped, 25yrs ago cloned-yet it's mode of action remains a mystery. doi.org/10.1007/BF0148… A portrait of Rudolf Freisl...
Powdery mildew is a fungal disease of many crop plants, most prominently maybe barley and wheat, where outbreaks can reduce grain quality & yield, and ruin complete harvests. Visible are the fluffy patches formed by the fungus (Blumeria graminis f. sp. hordei). A leaf and awn from a barle...
Freisleben used radiation-induced mutagenesis to create the barley 𝘮𝘭𝘰 mutant, which showed full resistant to this pathogen. A massive agricultural breakthrough!
See also Classic #2, to read about how Emmy Stein has developed this technique in 1921:
Read 12 tweets
Apr 8, 2022
#PlantScienceClassics #16: A linkage map of Arabidopsis thaliana. In 1983 the legendary Maarten Koornneef published a genetic map of A. thaliana, the basis for genetic work & an important contribution towards the acceptance of Arabidopsis as plant model. doi.org/10.1093/oxford… Title page of the 1983 pape...
In the early 1980s scientists finally adopted A. thaliana as model plant. At this point, several mutants were available, but their positions in the genome were mostly unknown. This was years before genome sequences became available,&genetic maps were still based on recombination.
Arabidopsis pioneer György Rédei did linkage analyses with 14 loci in the 1960s, but his genetic map from 1965 suggested 6 linkage groups – 1 more than chromosomes. Curiously, A. D. McKelvie created another map in parallel - & found 4 groups, 1 less than chromosomes. György Rédei’s linkage map,...A. D. McKelvie’s linkage ma...
Read 14 tweets
Mar 31, 2022
#PlantScienceClassics #15 #PlantScienceFails #1: The auxin-independent (axi) Nicotiana tabacum lines. In 1992 Richard Walden et al. (specifically co-worker Inge Czaja) published activation-tagged axi protoplasts @ScienceMagazine that could divide&grow in the absence of any auxin! Title page of the retracted...
The development of plant transformation in the early 1980s (classics #6&13) was inspirational for many scientists. Among them was Richard Walden, who teamed up with plant transformation pioneers Barbara & Thomas Hohn to leverage this advance to develop the “Agroinfection" method. Title page of the 1986 PNAS...
He then joined the next transformation pioneer, Jeff Schell, to develop more such tools. Their first was Activation-Tagging: 4 CaMV 35S enhancers (classic#9) were placed at the RB of the T-DNA. That way, they would overexpress the plant gene next to which the T-DNA was inserted. Figure 1 of the paper showi...
Read 12 tweets
Jan 25, 2022
#PlantScienceClassics #14: Mendelian inheritance. In 1866 Gregor Mendel published his work on dominant/recessive trait inheritance in peas, establishing the hereditary rules on which modern genetics is based. But nobody cared,& his scientific career ended. biodiversitylibrary.org/page/48299076 A portrait of Gregor Mendel...
Mendel had always been interested in nature, and grew/kept and observed plants and bees in his parent’s garden. He later decided to become a monk and teacher. However, he failed teacher’s exam in 1850 & 1856, & eventually settled on being a monk and substitute teacher.
He satisfied his curiosity as a naturalist by keeping and observing plants and bees in the monastery garden, and eventually became interested in how traits are determined through generations. So he started to conduct crossing experiments with mice with grey or white fur. An image of Mendel’s garden...
Read 19 tweets
Jan 20, 2022
Do you know Daisy Roulland-Dussoix? She is one of the discoverers of restriction enzymes, who’s findings paved the way for the development of recombinant DNA and cloning technologies. Accordingly, the finding was rewarded with a #NobelPrize. But the prize didn’t go to her... 🧵👇 A portrait of Daisy Roulland-Dussoix from Wikipedia.
Daisy Roulland-Dussoix worked with Werner Arber to study the mechanism for the observed host-specificity of λ Phages. It was known from an important 1953 paper (Bertani & Weigle) that phages, that had replicated in a certain E. coli strain, could only re-infect the same strain. Title page of the 1953 paper from G. Bertani and J. J. Weigl
Roulland-Dussoix & Arber showed that host-specificity is linked with the phage’s DNA. Using phages carrying radiolabeled DNA, they showed that progeny with 2 parental DNA strands retained specificity, while progeny with newly synthesized daughter strands could adapt to new hosts. Title page of the first paper by Werner Arber and Daisy DussExcerpt from the paper stating ‘(2) All progeny λ K(Pl) p
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