Marc Somssich Profile picture
Find me on BlueSky: @somssich.bsky.social
Mar 26, 2023 17 tweets 9 min read
#PlantScienceClassics #18: Ethylene triple response mutants. 35 years ago Anthony Bleecker et al. exploited the triple response phenotype to identify the #ethylene receptor ETR1. The ethylene story is another example for #PlantBlindness @NobelPrize. doi.org/10.1126/scienc… The Science cover picture of the 1988 issue shows the triple Ethylene is a gaseous #phytohormone with a wide range of roles from plant development to immunity. Ernest Starling in 1905 defined a hormone as mobile chemical messenger synthesized by a multicellular organism, that has physiological activity distant from the site of synthesis. Excerpt from Ernest Henry Starling’s 1905 paper “The Cro
Oct 12, 2022 12 tweets 6 min read
#PlantScienceClassics #17: The Mildew Resistance Locus O (MLO). 80 years ago Rudolf Freisleben & Alfred Lein created the first powdery mildew resistant barley plant. 30yrs ago the gene was mapped, 25yrs ago cloned-yet it's mode of action remains a mystery. doi.org/10.1007/BF0148… A portrait of Rudolf Freisl... Powdery mildew is a fungal disease of many crop plants, most prominently maybe barley and wheat, where outbreaks can reduce grain quality & yield, and ruin complete harvests. Visible are the fluffy patches formed by the fungus (Blumeria graminis f. sp. hordei). A leaf and awn from a barle...
Apr 8, 2022 14 tweets 8 min read
#PlantScienceClassics #16: A linkage map of Arabidopsis thaliana. In 1983 the legendary Maarten Koornneef published a genetic map of A. thaliana, the basis for genetic work & an important contribution towards the acceptance of Arabidopsis as plant model. doi.org/10.1093/oxford… Title page of the 1983 pape... In the early 1980s scientists finally adopted A. thaliana as model plant. At this point, several mutants were available, but their positions in the genome were mostly unknown. This was years before genome sequences became available,&genetic maps were still based on recombination.
Mar 31, 2022 12 tweets 4 min read
#PlantScienceClassics #15 #PlantScienceFails #1: The auxin-independent (axi) Nicotiana tabacum lines. In 1992 Richard Walden et al. (specifically co-worker Inge Czaja) published activation-tagged axi protoplasts @ScienceMagazine that could divide&grow in the absence of any auxin! Title page of the retracted... The development of plant transformation in the early 1980s (classics #6&13) was inspirational for many scientists. Among them was Richard Walden, who teamed up with plant transformation pioneers Barbara & Thomas Hohn to leverage this advance to develop the “Agroinfection" method. Title page of the 1986 PNAS...
Jan 25, 2022 19 tweets 6 min read
#PlantScienceClassics #14: Mendelian inheritance. In 1866 Gregor Mendel published his work on dominant/recessive trait inheritance in peas, establishing the hereditary rules on which modern genetics is based. But nobody cared,& his scientific career ended. biodiversitylibrary.org/page/48299076 A portrait of Gregor Mendel... Mendel had always been interested in nature, and grew/kept and observed plants and bees in his parent’s garden. He later decided to become a monk and teacher. However, he failed teacher’s exam in 1850 & 1856, & eventually settled on being a monk and substitute teacher.
Jan 20, 2022 11 tweets 4 min read
Do you know Daisy Roulland-Dussoix? She is one of the discoverers of restriction enzymes, who’s findings paved the way for the development of recombinant DNA and cloning technologies. Accordingly, the finding was rewarded with a #NobelPrize. But the prize didn’t go to her... 🧵👇 A portrait of Daisy Roulland-Dussoix from Wikipedia. Daisy Roulland-Dussoix worked with Werner Arber to study the mechanism for the observed host-specificity of λ Phages. It was known from an important 1953 paper (Bertani & Weigle) that phages, that had replicated in a certain E. coli strain, could only re-infect the same strain. Title page of the 1953 paper from G. Bertani and J. J. Weigl
Jan 18, 2022 13 tweets 6 min read
#PlantScienceClassics #13: Floral Dip. Almost 25 years ago, in 1998, Steven Clough & Andrew Bent published their geniously simple Arabidopsis transformation protocol @ThePlantJournal: Dipping a plant upside down into Agrobacterium solution - et voilà! doi.org/10.1046/j.1365… The title page of the 1998 ... I have covered the plant transformation backstory in Classic#6, the T-DNA, so here I will focus on the events after 1983, the year plant transformation was established. These first transformants all were plants regenerated from cultured cells as calli.
Jan 16, 2022 7 tweets 2 min read
I have done a couple of Twitter threads on interesting researchers worth knowing about. I have compiled them here in this thread and will add more in the future. #SciCom Have a look! 🙂🧵👇 1) Douglas Prasher, the man who cloned the original GFP gene.
Jan 5, 2022 13 tweets 6 min read
#PlantScienceClassics #12: The stem cell-maintaining CLAVATA(CLV)-WUSCHEL(WUS) feedback loop. In 1999/2000 the labs of Elliot Meyerowitz & @simonrdg published 2 joint @ScienceMagazine papers describing a self-regulating signaling loop that maintains the stem cells of plants. Title pages of the two Scie... Plants continue to grow for their entire life due to the activity of stable pools of stem cells. The shoot apical #meristem (SAM) is the stem cell niche responsible for producing all above ground cells and is located at the tip of the plant’s stem. Three sketches. First, an o...
Dec 2, 2021 13 tweets 6 min read
#PlantScienceClassics #11: The GUS reporter system. In 1987 Richard Jefferson & colleagues from @michaelbevan565's lab published the first reporter system to monitor promoter activity in planta in the @embojournal: doi.org/10.1002/j.1460… Title page of the paper showing its title “GUS fusions: be In the 1980s it was possible to express transgenes in cells of different organisms, but visualizing & assaying gene expression was still problematic. The lacZ β-galactosidase was a commonly used reporter, but compromised due to endogenous enzymes breaking down its substrates too.
Nov 15, 2021 15 tweets 10 min read
#PlantScienceClassics #10: AuxREs, ARFs & Aux/IAAs. In 1997 the trifecta of Tim Ulmasov (TU), Gretchen Hagen (GH) & Tom Guilfoyle (TG) unleashed their @ScienceMagazine/@ThePlantCell double strike on the plant sciences, making auxin the hot topic of the field for the next decade. Portraits of Tim Ulmasov, G... Starting with Charles Darwin & son Francis in 1880, several scientists (J. Sachs, F. Went, N. Cholodny...) had speculated that there must be a mobile substance in plants, acting as messenger to direct growth in response to stimuli such as light or gravity (a ‘growth substance’).
Nov 9, 2021 12 tweets 6 min read
#PlantScienceClassics #9: The CaMV 35S promoter. In 1985 Joan T. Odell & Ferenc Nagy from Nam-Hai Chua’s lab describe the Cauliflower mosaic virus 35S promoter @Nature, enabling researchers to ubiquitously expression their genes of interest in plants. doi.org/10.1038/313810… Title page of the 1985 Natu... The early 1980s were an important time for #PlantMolecularBiology: Among other things, plant transformation had just been established. But when introducing a gene into a plant, it requires regulatory sequences to activate its expression – and none active in plants were known.
Oct 27, 2021 14 tweets 6 min read
#PlantScienceClassics #8: Discoveries in Air. Joseph Priestley’s ‘Experiments and observations on different kinds of air’ in the 18th century formed the basis for the discovery and description of #photosynthesis. archive.org/details/experi… A portrait painting of Jose... Jan van Helmont was one of the first scientists who found that the mass of a plant is not acquired from the soil it grows in. When he grew a 5 lb willow tree in 200 lb of soil for 4 years, he found that the tree gained 164 lb, while the soil was only reduced by 2 lb. Title page of van Helmont’s...
Oct 18, 2021 13 tweets 8 min read
#PlantScienceClassics #7: The ZigZag Model.15 years ago @jonathandgjones & Jeff Dangl published their @nature review integrating Pattern/PAMP-Triggered Immunity (PTI) & Effector-Triggered Immunity (ETI) into one unified model of ‘The plant immune system’. doi.org/10.1038/nature… A picture showing Jeff Dangl and Jonathan Jones together, in In the 1980s, with plant molecular biology still in its infancy, the plant immune system was not understood very well at all. Dangl, at the time an immunologist working on mouse/human cells, remembers: ‘I had never considered that plants could recognize pathogens’.
Oct 11, 2021 12 tweets 9 min read
#PlantScienceClassics #6: The T-DNA. In a 1977 paper, Mary-Dell Chilton & colleagues identify the Transferred DNA (T-DNA), the bit of DNA that Agrobacterium tumefaciens inserts into the plant genome, to kick off the race toward the first transgenic plant. doi.org/10.1016/0092-8… A portrait of Mary-Dell Chi... It was known since before the 1940s, that Agrobacterium could induce tumors (‘crown galls’) on plants, & that these tumors then grow autonomously of the bacterium, meaning that the plant had been permanently ‘transformed’. But the molecular details for the process were not known. The title page of the 1912 ...
Oct 6, 2021 9 tweets 6 min read
#PlantScienceClassics #5: “Jumping Genes”. In 1950 Barbara McClintock published her landmark @PNASNews paper on the #Maize Dissociation (DS) & Activator (Ac) #TransposableElements, revolutionizing the field of #Genetics to hostile opposition from her peers.doi.org/10.1073/pnas.3… A portrait of Barbara McCli... McClintock started her career & work on #Maize in the 1920s @Cornell, where she immediately made an impact by optimizing chromosome staining methods to characterize the chromosomes of triploid maize in 1929, & then describing the physical basis for chromosomal crossover in 1931. An image showing chromosome...
Oct 2, 2021 11 tweets 7 min read
#PlantScienceClassics #4: Arabidopsis thaliana suggested as model plant. In 1943 botanist Friedrich Laibach suggested A. thaliana as model organism for plant science. But the community was not ready yet - it took them another 40 years to see the light… doi.org/10.7287/peerj.… An image of Friedrich Laiba... Laibach started work on A. thaliana in 1907, when, for his PhD-thesis, he determined the number of chromosomes in different plants he collected around his hometown Limburg, or @UniBonn, where he worked. A. thaliana only had 5 chromosomes, one of the fewest he found.
Sep 29, 2021 7 tweets 5 min read
#PlantScienceClassics #3: The ligand-induced flg22/FLS2/BAK1 receptor-module. In a 2007 @Nature paper @delphinechinch1 et al. demonstrated that the bacterial flagellin22 triggers the formation of its own receptor-complex in plants, made up of FLS2 & BAK1: doi.org/10.1038/nature… Cover of the 2007 Nature pa... Already in 1999/2000, three papers from the legendary Boller-lab @UniBasel in @ThePlantJournal/@MolecularCell identified the elicitor flg22 & its receptor FLS2,laying the groundwork to establish Arabidopsis as a model system to study plant pathogen-interaction & immune-signaling. The three title pages of th...
Sep 26, 2021 10 tweets 6 min read
#PlantScienceClassics #2: Radiation-induced mutagenesis. 100 years ago, in 1921, Emmy Stein developed radiation-induced #mutagenesis of #Antirrhinum majus plants. But today it seems that her invaluable contribution is being ignored… Read on doi.org/10.1007/BF0195… A portrait of Emmy Stein an... Mutagenesis is now an invaluable tool to understand a gene’s function. In the early 1900s, when the hereditary substance was not even identified yet, it was an even more important tool, which Emmy Stein added to the small toolbox available to biologists at the time.
Sep 23, 2021 7 tweets 5 min read
#PlantScienceClassics #1: The ABC model. 30 years ago, in 1991, plant science legends John Bowman, David Smyth and Elliott Meyerowitz published their groundbreaking paper on the ABC model in @Dev_journal: doi.org/10.1242/dev.11… Cover image of the 1991 iss... A regular Arabidopsis flower is composed of 4 whorls, each featuring specific organs: 4 sepals in the outer whorl, followed by 4 petals, then 6 stamen & 2 carpels in the inner whorl. These identities are controlled by the APETALA2 (AP2), PISTILLATA (PI) & AGAMOUS (AG) genes. Schematic view of an Arabid...
Jun 3, 2021 16 tweets 7 min read
Do you know who Douglas Prasher is? He is the person who cloned the original GFP gene in the early 1990s. In my short history of plant light microscopy I also cover a bit of his story - & why he is relatively unknown today, despite the importance of his work. See here: 1/14 🧵 A profile picture of Douglas Prasher from Martin Chalfie's N 2/14 In 1962 Osamu Shimomura et al. identified the bioluminescent Aequorin in the Aequorea jellyfish, as well as a green fluorescent protein, that seemed to act as a FRET-acceptor for the Aequorin 'in jelly' [1][2][3] (REFs at the end). Aequorea victoria jellyfish