A thread slightly borne out of frustration on the widely misrepresented discourse on long COVID, esp in children. This is for the 'long COVID studies in children with controls are rigorous and loads of controls have symptoms so not sure this syndrome is real or important' group🧵
First, controls per se *do not* make a study sound - How do you account for the fact that children are often asymptomatic acutely, serorevert quickly or don't seroconvert at all. Long COVID itself is associated with lower Ab levels, furthering this bias.
Rigorous science is v. important, but let's not pretend that studies are rigorous because they have controls (just like people pretend RCTs are superior to observational evidence by virtue of being RCTs, even if they're conducted badly). pubmed.ncbi.nlm.nih.gov/34273064/
When control groups are contaminated with cases (people who were infected but either didn't get tested or tested antibody negative), it leads to misclassification, which will underestimate prevalence. This bias is made worse by long COVID itself being associated with lower Abs.
Many long COVID studies haven't included key symptoms identified in surveys (e.g. brain fog, mood changes in the Zoe app study). And whether questions about specific symptoms were asked systematically vs open questions also makes a bit difference- anyone doing surveys knows this.
When follow up itself is biased e.g. in the Zoe app study, where reporting to indicate resolution of symptoms was much lower in cases than controls. And more incomplete follow-up in the group that was still reporting symptoms compared to those where symptoms resolved early.
This means it was likely that those who didn't follow up perhaps didn't because they were looking after sick children and had other responsibilities. In this case the fact of non-reporting in itself can be associated with illness and should not be used to indicate resolution
We considered different numbers of those not following up as having long COVID and found this could make very large differences to the estimates, if loss to follow up was actually dependent on having longer-term symptoms.
Accounting for waxing and waning of symptoms is also important, as this seems to be one of the key features of long COVID in patient surveys. Studies that don't allow for this will underestimate it.
Using 'any' symptom definitions alone is also problematic, rather than combinations of symptoms, and how they change over time, and proximity to previous infection - which are all important. There are very clear patterns of symptoms in long COVID. These need to be considered.
e.g. pre-menstrual syndrome is a constellation of symptoms along with timing (near the menstrual cycle). If one measured the symptoms in the general population, symptoms like bloating, constipation, breast tenderness are quite common. The pattern and when it occurs is important.
It's no coincidence that studies that look at combinations of symptoms find these are far better at spearating cases from controls. in long COVID cohorts. Multiple long COVID surveys show that clusters of symptoms exist & are similar. Here from the CloCK study:
Our work, CLoCK, and REACT-1 uncovered similar clusters & risk factors. We uncovered a respiratory system + fatigue cluster (fewer symptoms) and a far more multi-system symptom cluster with prominent neurological symptoms.
Women, those with pre-existing conditions, socio-economically disadvantaged, & those with multiple acute symptoms were at greater risk. This is very consistent with studies like REACT-1 and CLoCK carried out in different groups.
Clusters correlated strongly with functional indicators around day to day activities being impacted, sick leave, ability to care for others, suggesting they were likely functionally significant. These are reproducible and consistent patterns across patients reporting long COVID.
Several surveys, including ours, examining patterns of symptoms clearly show specific patterns in different studies- e.g. neurological symptoms often become more prominent over time, and are long lasting. Fatigue is long lasting.
Systemic symptoms like fever, chills and loss of smell & taste are less persistent.
So controls are important - but
-they need to be defined well - not just on cross-sectional serology, or negative tests at a point in time (given high asymptomatic infection, esp in children)
-constellations and clusters need to be compared between cases and controls too. 'Any' symptom based definitions don't really capture syndromes
-longitudinal patterns of symptoms also very important to consider and compare between groups.
'Any' symptoms being common in a control group is unsurprising, and does not 'rule out' a syndrome or tell us about it's prevalence. You can think of many well-known clinical syndromes with well-understood underlying biological mechanisms, and you'll realise this is true.
So, let's not pretend that long COVID studies with controls are somehow not limited or biased. They absolutely are. If you want to do long COVID research justice, involve patients, look at patient surveys and patient led research to understand patterns, and then study them.
Once you understand constellations of symptoms and patterns (yes, this actually requires surveys and studies that *don't* involve controls at first - just as we do observational case series initially in medicine to figure out what's going on, before we systematically measure it!)
Once you understand the possible constellation of symptoms and patterns, you can then study them in controlled studies- but do study the constellations and patterns, and not just studying 'any symptom' and concluding that it's 'all in the mind' or 'lockdown fatigue'.
Also, don't forget that there are now multiple studies showing biological correlates of long COVID- including neurodegeneration (yes, these too had controls, and pre- and post-covid scans!), autoimmune markers, neuro-vascular disease, renal disease, even in 'mild cases'.
So perhaps try to build a comprehensive picture of the syndrome and the biology rather than limited flawed analyses of biased studies with flawed controls that make little sense from a medical or clinical perspective.
Our critique of the Zoe app study here outlining the biases when loss to follow up may be associated with the outcome. Excluding missing data and re-analysing (the sensitivity analyses described by the authors) does not address this systematic bias: thelancet.com/journals/lanch…
And to those doing systematic reviews that say much of the same- unless you're critically evaluating the above biases, and addressing them, those reviews aren't worth much, and don't do justice to the people suffering with long COVID who deserve more critical & rigorous research.
One last bit- having listened to voices from the long COVID community, I can say that the worst part of dealing with flawed long COVID research has been watching people with long COVID being re-traumatised and gaslit again & again by badly conducted studies.
I don't think people realise the trauma of having a severe debilitating condition that affects your day to day life, and then having flawed research constantly quoted to tell you that your suffering isn't real. It's up to scientists to do much much better by patients.
I'd really like to move the discourse from 'does it exist?' to 'how is it impacting people long-term, what are the biological correlates, how do we prevent and treat it?'
Sorry, apparently, the REACT study link doesn't work for some - you can use this link and navigate to the June long covid react study and download the paper: imperial.ac.uk/medicine/resea…
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On BBC London just now challenging the 'mild' narratives. Takeaway: please stop blaming the scientific community for changing narratives in the media! That's down to media (assisted by some scientists with a track record of minimisation).
From 17:12 bbc.co.uk/sounds/play/li…
Omicron is a serious threat- it was before & it is now. As we get more information, we will be able to refine the level of threat more, but the data from yesterday doesn't at all mean that it's not a serious threat!!! If media has portrayed it that way, that's on them.
I'm actually really frustrated by the media rhetoric targeting scientists, and suggesting the public are frustrated with scientists for changing narratives and evidence. Evidence will change, but the way it's been portrayed in media does create whiplash, because it's misleading!
Some brief thoughts on the concerning relativism I've seen creeping into media, and scientific rhetoric over the past 20 months or so - the idea that things are ok because they're better *relative to* a point where things got really really bad. 🧵
Many pointed to summer in the UK saying it was a success because 'freedom day' didn't translate to anything like Jan 21 or March '20. No it didn't, but >18000 people died since (many deaths may have been avoided with simple measures like mask mandates, mitigations in schools)
And of course we have 1.2 million with long COVID with children seeing a doubling in 4 months. But all this is okay, because it's not as bad as Jan, or March last year. When the pandemic hit in March, we were thoroughly unprepared.
Just a quick note- if you're comparing hospitalisations currently with Jan levels and saying - 'NHS not overwhelmed because they're lower', that's not a reflection of reality. The NHS has way less slack in the system than it had in Jan. It's already overwhelmed. 🧵
We can't keep comparing with Jan peak, and going 'if it doesn't get that far, it's fine' when people can't get timely emergency care now. Not having routine care available fore millions of people for 2 years means there is a lot more burden on emergency services than there was.
Short term thinking and putting the NHS repeatedly under overwhelming pressure over the last few years has massively reduced resilience in the system. And many more people need emergency care due to lack of routine care over the past two years - not just COVID-19.
Wanted to say - although the Imperial paper shows protection from hospitalisation *if infected* remains comparable between omicron and delta, the protection *from infection* is vastly reduced. This will mean overall reduction in efficacy against hosp with omicron.🧵
To explain further - vaccine efficacy against hospitalisation is two components:
- protection against infection
-protection against hospitalisation *if infected*
The Imperial study suggests that while the latter isn't affected much (70-80% protection with 2 doses, boosters) *if infected*, your protection from infection is really reduced with omicron. This means *overall* protection from hosp is lower.
🧵on the Imperial study on omicron severity TL;DR:
-*intrinsic* omicron severity similar/bit lower to delta
-*observed* severity lower due to omicron more likely to re-infect
-vaccine efficacy against hosps maintained
-growth rate likely to override impact of lower severity
Before I get into the rest, I want to re-emphasise that the overall impact of omicron will be determined by growth (exponential) and severity (linear)- even with lower severity, growth in itself will cause serious impact at population level, even if severity is moderately lower.
The Imperial study is a complex piece of analysis, and I have to commend the Imperial team for dealing with important confounders in the analysis.
An important study- it suggests that Omicron has a much greater growth advantage among the vaccinated, and previously infected, and possibly a lower growth advantage compared to delta among those who were susceptible (not vaccinated/infected or waning of immunity)
This doesn't mean vaccines are not effective. It means that among the vaccinated and previously infected, omicron has a higher advantage compared to delta because it has higher escape from immunity (although both have lower infective probability compared to unvaccinated)
It's possible that intrinsic transmissibility of omicron relative to delta (apart from escape) may not be much higher, or possibly even slightly lower. But it would still have a massive advantage among those with prior immunity through vaccines/infection.