I appreciate Eric saying this after some of us sort of jumped on him about this issue last night! Paxlovid is a good example of where small-molecule synthesis falls on on the difficulty scale when compared to things like mRNA vaccines - here's a thread (1/13)
The mRNA vaccines are intrinsically hard to manufacture - RNA biotechnology on scale is practiced in only a few countries around the world, and the nanoparticle formulation is particularly challenging to scale up and to get right. (2/13)
Small-molecule synthesis (though no picnic) is easier than that - there are generic drug manufacturing facilities in many more countries, and many of these can potentially adapt to processes like the Paxlovid synthesis. That's the good part. (3/13)
But the tricky part becomes the supply of the various starting materials and reagents. We even saw that in the small molecule part of the RNA vaccine scale-up, when the cationic lipids became a production bottleneck for a while. (4/13)
A big difference is that proteins, DNA, and RNA will sort of make themselves, if you can do the cell culture and molecular biology involved (which is a big "if" on the industrial scale). We're co-opting a billion years of evolution for our own purposes there. (5/13)
Small molecules, though, come in far, far more varieties than the repetitive building blocks of proteins and oligonucleotides. The number of potential structures is effectively unlimited, and the number of potential industrial starting materials is likewise huge. (6/13)
We organic chemists have learned a lot of tricks about how to make small-molecule drugs, and the process chemists and chemical engineers have a whole specialized expertise in doing synthesis on a huge scale. Most of the time, we can come up with robust, workable routes. (7/13)
But you have to source the starting materials if you're going to do that - and the *huge* majority of such building blocks and reagents come from industrial producers in places like China and India. Very few of those things are made in the US. (8/13)
So invoking the Defense Production Act (for example) is of limited use. The chemical plants you'd want to commandeer just aren't there. A big part of industrial drug production is lining up complex supply chains and contract manufacturing around the world. (9/13)
A given drug might travel through two, three, four countries on its way to be packaged into pills, with different synthesis and manufacturing steps done in the places with the facilities and the expertise. Finding these partners is close to an art form. (10/13)
Now for Paxlovid, you can bet that Pfizer has been putting these blocks together for the last few months. They have a lot of experience doing this, but this means that the obvious suppliers of starting materials have already been lined up. (11/13)
Since there are so many potential starting materials in this business, it's easy to use up the capacity for any given one if there's a surge in demand. That slack can be picked up by other chemical suppliers, but it takes time, money, and effort. (12/13)
We'll get Paxlovid made, and made in many locations around the world (Pfizer has licensed the patent out). But it's going to be a scramble to get capacity up under these zero-to-thousands-of-tons conditions, and there are no easy ways (like the DPA) to fix that quickly. (13/13

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More from @Dereklowe

22 Dec
I recommend this thread on the Lieber case and conviction - several interesting details. My own thoughts are in the next few tweets (1/10)
You can come at this story from several directions. One is the position of US universities as a destination for hard-working and talented people from around the world. This is a huge benefit for the country, and if we mess that up we are idiots. (2/10)
But (a 2nd angle) China is in its own category (size, economy, and more). The Chinese government aggressively seeks out economic and technological advantage, and they definitely use (or try to use) students and post-docs for this. (3/10)
Read 10 tweets
26 Jun
Since I keep getting inquiries about the idea of antibody-dependent enhancement (ADE) problems with the coronavirus vaccines, here are some fresh data (1/5)
In May, the US had 18,000 deaths from Covid-19 infections. First: if the vaccines weren’t working, you’d expect these deaths to show roughly the same proportion as that of vaccinated and unvaccinated people in general. (2/5)
And if we had a real ADE problem, you could expect proportionally *more* deaths among the vaccinated, because ADE makes subsequent infections worse - the “enhancement” part. (3/5)
Read 5 tweets
5 May
@christymaginn (1/x) There are several bottlenecks to vaccine production, all jostling for the #1 position. One is equipment. Mixers for the mRNA lipid nanoparticles, e.g. Some types of filtration material (not patented!) are in very short supply as well, and there are others.
@christymaginn (2/x) Another bottleneck is in key materials like the lipids needed for the mRNA vaccines. Supply of these has been ramping up, but there's still only so much of these things in the world, and their synthesis is labor-intensive.
@christymaginn (3/x) A really tough one is expertise. All of these processes (mRNA, adenovirus) need hands-on tech transfer to troubleshoot as they ramp up, otherwise production can be spotty with poor QC pass rates. There simply aren't enough experienced people to go around!
Read 5 tweets
31 Dec 20
(1/8) The UK authorities are now trying to spread out the two doses of the Pfizer/BioNTech vaccine as well, in order to get more people the first shot now. A similar situation to what I wrote about yesterday: blogs.sciencemag.org/pipeline/archi…
I see why they’re proposing this, of course. The UK is in bad shape, with the new coronavirus variant spreading quickly. And we have evidence that the first shot really does seem to be immunogenic. BUT. . . (2/8)
. . . There are important things we don’t know. How long does immunity last if you’ve only had one shot? How well does the second booster shot work if the gap between them is longer? (3/8)
Read 8 tweets
16 Nov 20
Absolutely wonderful news from Moderna: 94% vaccine efficacy, zero severe coronavirus cases, no severe adverse events, and one-month stability under standard refrigeration.

We’re winning. Hang on, hang on, hang on and stay safe. We’re going to win.
Thoughts on the Moderna results this morning - safety, efficacy, and more. The vaccine news is very good, especially when it's illuminated against grim pandemic news in general: blogs.sciencemag.org/pipeline/archi…
Read 4 tweets
7 May 20
You may have seen claims from people promoting hydroxychloroquine that there are numbers from Italy that prove that it's a prophylactic treatment against COVID-19. These numbers are complete fiction. (1/5
There are at least two mentions in media sources (one from an Italian newspaper, one from an interview in the Israeli press) about the Italian Rheumatology Society monitoring their patients who are taking HCQ for coronavirus cases. (2/5)
These sources say that 65,000 such Italian patients have been monitored and that only 20 of them have been diagnosed positive. *This is false*. I dug into the numbers here, and they did not add up (3/5):
blogs.sciencemag.org/pipeline/archi…
Read 5 tweets

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