Taking a look at the use of CRISPR CAS9 use in ex-vivo cell therapies.
1/ $CRSP is using the same CRISPR/CAS9 system as $NTLA. This is made up of the CAS9 enzyme which has 2 nuclease domains that do the cutting of the DNA into a Double Stranded Break. It also includes a guide RNA for searching the DNA for the correct site.
2/ The biggest danger of the CAS9 enzyme is that cuts both strands of the DNA at the same location. Without the use of a template strand, this will trigger Non Homologous End Joining which is a very inaccurate process.
3/ This can lead to Insertions and Deletions (Indels) of bases that could shift the reading frame of the gene. $CRSP is getting around this as they are focusing ex-vivo cell therapies.
4/ All their therapies extract cells from a patient and edit them before inserting them back into the patient. The exception to this is the Regenerative Medicines they are doing with stem cells for diabetes.
5/ CTX-001:
Their fist program is actually the most advanced of all the CRISPR programs in development. It is in an ongoing phase 1 and 2 trial for Beta Thalassemia and Sickle Cell Disease.
6/ The Beta Thalassemia indications is very small. Only a few thousand patients world wide. The Sickle Cell Disease is 90,000 in US and over 300,000 world wide.
7/ Sickle Cell Disease is a horrible disease with a defect in the normal production of Bet Globin. The Hemoglobin is made up of 2 alpha and 2 beta globin. The defect in the Beta Globin causes the Hemoglobin to polymerize into long chains in low oxygen.
8/ This causes the Red Blood Cells to sickle into a boomerang like shape. This causes blockages that can be life threatening and intense pain.
9/ The data is best in class for SCD showing follow up with no events of Vaso-Occlusive Crisis so far. All patients were into the normal hemoglobin range of 11 to 15.9 g/dl and fetal Hb level in the 39.6% to 49.6% range.
10/ This is considered a functional cure. The safety data looks consistent with what would be expected from an autologous stem cell transplant. $CRSP only owns 40% of the revenue for CTX-001. They are partnered with Vertex who gets the other 60%.
11/ CAR-T:
The next set of programs for them are their 3 CAR-T programs CTX-110, CTX-120, and CTX-130. The early efficacy data in these programs was promising, but the durability was horribly low.
12/ They showed less then 6 months durability which is actually on par with other allogeneic CAR-T programs. The error in this is not $CRSP, but the entire allogeneic space. It could be limitations in the science at this stage.
13/ The company took a huge pounding on its massively bubbly market cap last year after this data failed to impress. Its been a long and difficult road since going from over loved to value stock.
14/ This last program is their Diabetes cell therapy. This is in partnership with ViaCyte. They are using CRISPR to engineer islet cells that can produce insulin for a patient.
15/ This is placed into the ViaCyte capsule and then into the patient. The biggest risk of this system in immunogenicity of the capsule. The other big issue is the cells inside the capsule responding to levels of insulin and demand.
16/ I have been in $CRSP since October 2018, and I haven't seen the pipeline or the science change in all those years. They are still advancing the same programs.
17/ Meanwhile, other CRISPR companies are adding all kinds of cool new technologies like base editing, targeted LNP and In-vivo editing. I recently fell out of love with the company as they lack the innovation, and I don't know if they will get it back.
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This company is all about what we do with that genetic data after we got it.
1/ The sequencing companies make the machines to actually sequence the DNA or RNA. $NVTA is about taking that genetic data and translating it into something that can be used my medical professionals to treat patients.
2/ This is about using automation, software and a database to use the genetic data acquired by the sequencing. I call this the Genomics Application company.
They are building the best long and short read company in sequencing.
1/ They already have the long read sequencing with the SMRT technology. They have an install base of 326 instillations as of Q3. That has a lot of potential to grow. Half their revenues comes from the selling of the consumables that goes into running those devices.
2/ As the Base grows, this becomes like the Apple model with and ecosystem. They buy the device and then you earn revenue off the use of that device.
Digging into how Single Molecule, Real Time (SMRT) technology.
1/ The SMRT technology takes advantage of DNA synthesis. To understand it, we must do a brief review of DNA synthesis. When DNA gets copied, a single strand of DNA gets copied by the DNA polymerase enzyme.
2/ The nucleotides are picked up by the DNA polymerase and incorporated into the new strand of DNA that is being built that is an exact opposite copy of the template strand.
Taking a look the science behind CRISPR CAS9 and in-vivo liver editing.
1/ $NTLA is using the CRISPR/CAS9 system. This is made up of the CAS9 enzyme which has 2 nuclease domains that do the cutting of the DNA into a Double Stranded Break. It also includes a guide RNA for searching the DNA for the correct site.
2/ The biggest danger of the CAS9 enzyme is that cuts both strands of the DNA at the same location. Without the use of a template strand, this will trigger Non Homologous End Joining which is a very inaccurate process.
Taking a look at the preclinical data for their programs so far.
1/ They have two main programs around correcting Sickle Cell disease. Their first program BEAM-101 is doing a simple gene knockout on the gene that suppresses Fetal Hemoglobin expression causing the reactivation of the Fetal Hb gene.
2/ Their second program uses base editing to change the defective base in the Sickling Hemoglobin to a Makassar that works normally.
This will be a look at the underlying technology of base editing. I plan another guide for the science and maybe another for the corporate.
1/ They are using base editing technology. This takes the CRISPR CAS9 enzyme along with the guide RNA attached to a deaminase enzyme to make a modification to a single base of the DNA.
2/ The guide RNA looks for a photospacer sequence in the DNA. That is just a matching sequence of DNA that matches the guide RNA. Next to the photospacer sequence will the the Photospacer adjacent motif (PAM).