Erik Karlsson Profile picture
Mar 2 7 tweets 3 min read
I would like to clarify recent statements in the press regarding the ##H5N1 virus detected recently in #Cambodia that were taken out of context. The confusion surrounds the implication that the virus has already gone “through” humans, and may be misinterpreted. (A thread - 1/)
For clarification, #H5N1 virus sequenced from the case in Cambodia shows certain changes that are anticipated and have been found in previous avian and/or human strains when they go from a bird to a human. (2/)
This does *NOT* indicate that the virus is mutating or adapting to become human-to-human transmissible, nor does it state that the virus has already transmitted between humans. (3/)
The Cambodian #H5N1 sequence, available on @GISAID, indicates presence of natural changes previously found in both avian viruses and/or other isolated human cases. The virus does *NOT* have the PB2627 or HZ225 mutations experimentally associated with mammalian transmission. (4/)
The small adaptations we observe have been detected in spillover events into humans in the past, and have not resulted in sustained human-to-human transmission. **Rigorous experimental analysis is necessary to evaluate the effect of these mutations on this specific virus.** (5/)
#AvianFlu is of the utmost concern. However, any implication that this #H5N1 virus is fully human adapted or transmissible between humans can lead to unwarranted fear. It is important that we continue to go with scientific, accurate and balanced information. (6/)
@PasteurCambodia continues to work with Cambodian and international authorities surrounding this case, and no implications of human-to-human transmission have been found. (7/)

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More from @E_A_Karlsson

Feb 26
Happy to announce that the full genome sequence of the Cambodian #H5N1 #avianflu case is now available on @GISAID. This has been an incredible effort by a number of people: (1/)
We were able to go from original sample to full genome sequence in <24 hours using iMS-PCR from @peter_thielen from @JHUAPL on @oxfordnanopore #ONT technology @nanopore #nanopore using capacity developed before and during the #COVID19 pandemic (2/)
This information is critical in our understanding of this case as Clade 2.3.2.1c #avianinfluenza viruses have been endemic in Southeast Asia for ~10 years and human-human transmission ability has not been established. (3/)
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