Health Nerd Profile picture
27 Nov, 18 tweets, 5 min read
Wow. Yet another ecological paper on COVID-19 that appears to have some astonishing flaws

Let's do a bit of peer-review on twitter 1/n
2/n Paper is here. Basically, the authors took total COVID-19 mortality in a range of countries by August 31st and correlated them with country-level metrics such as average BMI frontiersin.org/articles/10.33…
3/n The authors found that country-level metrics compiled by the University of Oxford on the stringency of lockdowns did not correlate well with the number of deaths that a country experienced from COVID-19, but other things like BMI and latitude did
4/n But even a very shallow skim of the methodology brings up extremely serious concerns

For example, where did they get their data?
5/n Well, the obesity rates were taken from the CIA Factbook

This is manifestly inappropriate. The factbook was last updated in 2016 for these figures and mostly references reports that are 6+ YEARS old
6/n I'm not sure what meaning we could take from correlating COVID-19 deaths in August with obesity rates from 2012, but it's certainly not a lot
7/n The physical inactivity data was taken from the WHO's global data repository, which was updated in 2018. This is better, but it's still aggregating data from vastly different surveys done in different ways in different countries across the world
8/n The government stringency index was taken from Oxford data, which you can see here. You can see some problems with this almost immediately as well
9/n For example, in August (when this study compared countries), Australia was rated as 75/100 on the stringency index. This is because one state of the country (Victoria) had extremely strict restrictions in place
10/n But for most of Australia, life was largely back to normal (except for travel) by August!

Similarly, India is given a stringency index of 81(!) even though the response there varies quite a bit by states as well
11/n Which brings us to a more central issue with this entire analysis - the ecological fallacy

I've written about this before gidmk.medium.com/why-you-might-…
12/n Simply comparing COVID-19 death rates at the national level with some population-level indicators is a pretty pointless thing to do no matter how you do it
13/n What possible meaning can you garner from the fact that the latitude of the barycenter of some countries correlates with their COVID-19 death toll as of August 31st?
14/n Even worse, the authors made no attempt to control for the age distribution of those infected in the population, which as we know very well by now is the biggest defining factor in the death rate from COVID-19
15/n Also, the authors note that reverse causality may be an issue when interpreting the correlation between COVID-19 deaths and economic intervention, but don't make this point for the stringency index even though it's probably exactly as problematic
16/n Also, the fact that the authors call this "the least uncertain" data is pretty wild, because a) it isn't and b) the least uncertain sources are TERRIBLE for many countries so WHY USE THEM AT ALL????
17/n Ultimately, I cannot see how you can take home anything from this research aside from the fact that some country-level measures recorded years ago correlate well with COVID-19 deaths and some don't
18/n I feel like @TylerVigen should create a new version of the Spurious Correlations website with COVID-19 deaths so that people can see just how pointless all of these ecological studies really are

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More from @GidMK

25 Nov
This is actually an excellent point that is not made often enough. Most vaccine trials are done over years, so they have smaller numbers because more people get infected. The COVID-19 trials are VAST
We won't pick up on any long-term side-effects that only take place after 6-12 months, of course, because of the shorter time frame

Still, the trials are pretty amazing
Worth noting here that when I say "long-term" I really mean "only diagnosed after 6 months". By the time vaccines are rolled out, we'll have at least 6 months of follow-up data so anything that you'd expect to be picked up in that time-frame should show some signal
Read 5 tweets
25 Nov
I added some very useful context

Tests take a short time to be recorded as cases. Cases take a while to go to hospital and then be recorded. Deaths take weeks to appear in the stats

The deaths reported today represent people who got sick ~3-6 weeks ago 😬
The corollary, of course, is that we won't see deaths attributable to the enormous rise in cases for another few weeks, and that hospitalizations from the record-breaking days of new cases are still coming in
This is all very rough, and since @COVID19Tracking aggregates all the different states there's a lot of variance. Different places report differently!
Read 4 tweets
25 Nov
A really fascinating paper looking at contact tracing in England that provides some convincing evidence that testing/tracing reduces infections and deaths

warwick.ac.uk/fac/soc/econom…
The authors used the now-famous Excel spreadsheet stuff-up to perform a quasi-experimental analysis of whether places where no contacts were traced had higher levels of infections

They did
The estimates imply that, for every case that was not traced, there were an additional 25 cases down the track
Read 5 tweets
25 Nov
In the dissection of the Year That Was COVID-19, one of the most depressing failures will probably be the vast, almost uncountable sums we've spent proving over and over that HCQ doesn't work
Glad that these results are getting published, but it's still astonishing just how much effort we threw behind a single drug despite many early indications that it was a red herring
We should never really have been in a situation where, simply because it was popular, most of the urgently needed research funds (and patients) went to research a single medication
Read 4 tweets
24 Nov
If the U.S. maintains current infections (~200k/day) of COVID-19, and assuming about 17% of the country has already been infected, it will be about a year before the country reaches herd immunity

Compare that to vaccine rollout schedules
Calculations:

US pop: ~328mil
17% infected: ~60mil (per serology and @youyanggu)
40% (low) HIT: ~131mil
131-60 = ~71mil
~71mil/200k = 356

Add a few weeks for everyone to be ~immune~, and it's a bit more than a year
Yes, this is assuming the 200k number is reliable, which we know it is not. It is likely that there are instead 400k infections per day, which halves this number. It is also likely that the HIT is 60-70%, which doubles it 🤷‍♂️
Read 4 tweets
23 Nov
You have to wonder what the "herd immunity through everyone getting sick" people are saying now that there is likely to be an effective vaccine beginning roll-out within weeks/months
I mean, the entire IDEA of letting everyone get sick was that a vaccine was a distant future that we couldn't rely on

Well, now it appears that we probably can
It would be the height of hypocrisy to not shift your message given that the foundation of the argument has now completely changed
Read 4 tweets

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