1/ In this 2nd @SciImmunology paper (immunology.sciencemag.org/content/6/62/e…), we show pre-existing auto-Abs neutralizing low physiological concentrations of type I IFNs account for 15% of critical COVID-19 cases, including 20% of critical cases in patients >80 yrs and 20% of deaths across ages.
2/ We tested 100-fold lower concentrations of type I IFN than in our previous report (science.sciencemag.org/content/370/65…). We also found that, in most patients, these auto-Abs neutralize IFN-alphas and/or -omega, while other patients carry auto-Abs that neutralize IFN-beta only.
3/ The penetrance for critical COVID-19 pneumonia is high, but depends on the nature of the auto-Abs (e.g. neutralization of both IFN-alphas and -omega versus -omega only), as indicated by the varying odds ratios.
4/ By testing >30,000 uninfected subjects in the general population aged 18 to 100 years, we confirm that these auto-Abs precede SARS-CoV-2 infection, in about 0.5% of people younger than 60 years.
5/ Moreover, the prevalence of auto-Abs to IFN-alphas and -omega sharply increases with age, reaching 4% over age 70 years and up to 7% between 80 and 85 years.
6/ In contrast, the prevalence of auto-Abs neutralizing (high concentrations of) IFN-beta seems to be independent of age, stable in all age categories.
8/ Replications of the latter study in cohorts from Lyon, Amsterdam, Madrid, San Francisco, and New Haven have been published (papers below). It now becomes important to test neutralization of lower concentrations of type I IFN, including IFN-beta, in these and other cohorts.
10/ Overall, we show that 4% of people > 70 years carry auto-Abs neutralizing physiological concentrations of type I IFN-alphas and -omega, which contributes to the much greater risk of critical COVID-19 in the elderly population.
1/ In this first @SciImmunology paper (immunology.sciencemag.org/content/6/62/e…), we show that at least 1% of men younger than 60 years with life-threatening COVID-19 are sick because of X-linked recessive (XR) TLR7 deficiency.
2/ In an unbiased burden test, we found TLR7 as the most significant hit on the X chromosome; with very rare (MAF<10e-4) nonsynonymous variants found in patients with critical COVID-19, but not in patients with asymptomatic/mild infection.
3/ By testing all known TLR7 variants, we found that only 4 of the 8 previously reported TLR7 variants in COVID-19 patients are LOF, and that the cumulative MAF of LOF variants in men in the general population is < 6.5x10e-4.
We report @JExpMed an international survey of SARS-CoV-2-infected APS-1 patients and show that they are at very high risk of life-threatening, critical C-19 pneumonia due to preexisting auto-Abs neutralizing type I IFNs (urldefense.proofpoint.com/v2/url?u=https…)
APS-1 patients typically carry bi-allelic mutations in 𝘈𝘐𝘙𝘌, which controls thymic expression of peripheral antigens, thereby governing central T cell tolerance (science.sciencemag.org/content/298/55…).
We show that neutralizing autoantibodies to type I IFNs underlie a third of the life-threatening adverse reactions to yellow fever virus live-attenuated virus (YFV 17D): rupress.org/jem/article/21…
We also report a patient with YFV 17D disease due to inherited IFNAR2 deficiency, consistent with our previous description of a patient with inherited IFNAR1 deficiency: rupress.org/jem/article/21…
These studies indicate that at least half of the rare but devastating cases of YFV 17D disease are due to inborn errors of type I IFN immunity or their autoimmune phenocopy.
We have been silent for a while because our lab and the CHGE were entirely focused on finishing 'twin papers' in @ScienceMagazine about inborn errors of type I IFN or auto-antibodies to type I IFN in nearly 15% of patients with life-threatening #COVID19 😀 science.sciencemag.org/content/369/65…
Here is the first paper, which shows that variants in only 13 influenza susceptibility candidate genes that govern TLR3- and IRF7-dependent production of type I IFNs account for at least 3.5% of critical cases of #COVID19science.sciencemag.org/content/early/…@ScienceMagazine
Here is the other paper, which shows that neutralizing auto-Abs to type I IFNs account for at least 10% of critical cases of #COVID19, even in a greater proportion in men: an auto-immune phenocopy of the corresponding inborn errors science.sciencemag.org/content/early/…@ScienceMagazine