Jeff Clements 🦪 Profile picture
Feb 3, 2022 13 tweets 7 min read Read on X
Our paper documenting an extreme decline effect in #oceanacidification studies on fish behaviour is now out in @PLOSBiology!

doi.org/10.1371/journa…

The paper is much different than the original preprint, so here’s a thread: Image
Some of the most drastic & ecologically worrisome impacts of #oceanacidification are reported for fish behaviour. Initial studies from 2009-2010 documented 100% impairment of anti-predator behaviour for fish exposed to ocean acidification conditions!

onlinelibrary.wiley.com/doi/10.1111/j.… Image
However, studies reporting no effects have seemingly increased in recent years, casting some doubt on these dire predictions

This phenomenon of decreasing effect sizes over time is not uncommon and is typically referred to as the “decline effect”

en.wikipedia.org/wiki/Decline_e… Image
We wanted to determine whether a decline effect was evident among studies testing for #oceanacidification effects on fish behaviour

To do this, we used a systematic review & meta-analysis to compile a database of 795 observations across 91 studies Image
We found that these studies were strongly characterized by the decline effect

Effect sizes decreased dramatically over the past decade from >5 in 2009-2010 to <0.5 after 2015

Perhaps one of the strongest examples of this phenomenon in ecology to date! Image
The decline effect could be biologically driven

Increasing studies over time on less sensitive cold-water species, non-olfactory behaviours & non-larval life stages could drive lower effect sizes in later years

But controlling for these did not remove the decline effect Image
However, decline effects are commonly driven by biases that the process of science is prone to

These include methodological biases such as underpowered studies early on in a field, publication bias, & citation bias
We found that studies reporting large effect sizes tended to cluster at low sample sizes

87% of studies reporting a mean effect size magnitude >1 used fewer than 30 fish per treatment; there was a sharp decrease in effect size magnitudes >0.5 when >30 fish were used Image
We also found that large effect size magnitudes tend to be published in high impact journals & continue to have a stronger influence on this field in terms of citations Image
Finally, it is difficult to ignore the elephant in the room: the scientific integrity of some studies, particularly those authored by lead investigators of the initial 2009-2010 papers, has recently been questioned

doi.org/10.1126/scienc… Image
At the request of the journal editors, we re-ran the analysis on a dataset excluding studies authored or co-authored by the lead investigators of the original 2009-2010 studies

The decline effect disappeared & effect size magnitudes were consistently low through time Image
We think #oceanacidification likely has negligible direct effects on fish behaviour

But current studies continue to disproportionately cite early studies, promoting broad impacts on fish behaviour & ecology

We hope our paper helps shift the mindset of this field
Finally, we want to be crystal clear here: our findings do NOT mean that #oceanacidification & #climatechange are non-issues

Warming & acidification will have other major impacts on marine organisms

But direct effects of acidification on fish behaviour likely aren’t among them

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More from @biolumiJEFFence

Feb 5, 2022
The massive amount of positive attention that our article has been getting has forced me to reflect a bit on the process of getting this thing published

This has by far been the hardest paper to get published in my career to date

journals.plos.org/plosbiology/ar…

A boring thread:
I first presented this work at @SEBiology back in 2019 in Seville - what a brilliant conference

Photo credit: @Craig_R_White
Soon after, we submitted (a much shorter version of) this paper to Nature as a Comment - after a month and a half, the paper was desk rejected
Read 14 tweets
May 31, 2021
New paper out today in Limnology & Oceanography (@aslo_org) led by all-around great guy & scientist Mike Coffin!

“The killer within: Endogenous bacteria accelerate oyster mortality during sustained anoxia”

aslopubs.onlinelibrary.wiley.com/doi/full/10.10…
In a suite of experiments comparing #oysters treated w/ antibiotics vs. not, we demonstrate that bacteria endogenous to oysters accelerate mortality rates

The 3-year project was triggered by mass mortality of cultured oysters in 2016, seemingly linked to a period of low O₂
Generally, we found that oysters treated w/ antibiotics (chloramphenicol) lived approx. twice as long as those not treated with antibiotics

Oyster density appeared to have no effect on mortality rates under anoxia
Read 8 tweets
Sep 17, 2020
A recent study in @nature couldn't replicate drastic CO2 effects on coral reef #fish behaviour & empirically found no effect of #oceanacidification go.nature.com/3hK49UR

Our #metaanalysis of the past decade on this topic concurs ecoevorxiv.org/k9dby/

Breakdown thread👇
We demonstrate one of the most striking examples of the #DeclineEffect in #ecology to date, w/ reported effects of OA on fish behaviour all but disappearing over past decade

If you’ve never heard of the #DeclineEffect see: bit.ly/2EbZX2o
Qualitatively the number of studies reporting “strong” effects of #oceanacidification on fish behaviour have plummeted over time
Read 19 tweets

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