As @hankgreen nicely points out, we have to be careful that "we don't know whether the vaccine reduces transmission" doesn't morph into "the vaccine doesn't reduce transmission." How do we communicate this uncertainty? A few thoughts. 1/7
First, vaccine efficacy against infection can't be higher than vaccine efficacy against disease. If something prevents infection, it also prevents disease. But vaccines can work by preventing symptoms, and so give an extra boost to efficacy against disease. 2/7
So while we expect vaccine efficacy against infection to be lower, we aren't sure how much. We have a bit of data from the UK/Oxford and Moderna trials showing reduced infection, but we are waiting on antibody testing data from these and other trials. 3/7
Even if the vaccines have lower efficacy against infection, meaning vaccinated people still get infected, there are other ways for vaccines to provide indirect protection. They could reduce the duration or amount of viral shedding, making people less infectious. 4/7
Relatedly, we have accruing evidence that people who never experience symptoms are less contagious than people who do. So maybe if a vaccine works well enough to prevent symptoms, it could also make these people less contagious? 5/7
nature.com/articles/d4158…
The above is more complex to sort out. We can use viral shedding data, but this is generally only available from symptomatic trial participants. We could also conduct specialized tracing studies or cluster randomized trials, but this takes time. 6/7
medrxiv.org/content/10.110…
But for now, the way I frame it is:
- With 95% efficacy against disease, it seems likely that the vaccine is providing some level of indirect protection.
- We have to make policy decisions now, despite uncertainty, so we try to balance what we know with what we expect. 7/7

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More from @nataliexdean

8 Dec
Out in @TheLancet, results from the Oxford/AZN trials, including more detail on the low dose results. Notably, the low dose recipients "received their second dose after a substantial gap." Only 0.8% received a second dose within 8 weeks of the first. 1/5
thelancet.com/lancet/article…
Recall that the low dose results were only from adults 18-55, only during a short time window, and only in the UK. Per reviewer request, they restricted the standard dose analysis to a similar group. We still see separation (middle rows), but with more uncertainty. 2/5
Overall, the 62% result for the standard dose regimen appears robust, and meets pre-specified criteria (>50%). But I am still not sure what to make of the low dose result. Is it the longer gap between doses? The low dose? Both? And there remains no data for older adults. 3/5
Read 6 tweets
25 Nov
With respect to the AstraZeneca vaccine, I am guessing people think my objection is to science by press release, and that I want a peer-reviewed publication. But no, not really. What I want is reliable and definitive evidence to inform policies impacting millions. 1/4
If the answer is that AstraZeneca needs to go back and add a new half-dose arm to their trials so that they can prospectively evaluate its efficacy in diverse subgroups, then we have to carefully consider the value of a peer-reviewed publication at this moment. 2/4
We’ve written about this in @NEJM. Basically, there are risks to publishing results that are “promising but inconclusive.” Though it seems slower at the time, in the long run it is better to generate the conclusive evidence while we still can. 3/4
nejm.org/doi/full/10.10…
Read 4 tweets
24 Nov
Astrazeneca/Oxford get a poor grade for transparency and rigor when it comes to the vaccine trial results they have reported. This is not like Pfizer or Moderna where we had the protocols in advance and a pre-specified primary analysis was reported. 1/5
AZN is evaluating their vaccine in multiple trials across the world, yet these are not embedded under a unified protocol. In fact, the trials seem to be quite different by country, in terms of populations, subgroups, etc. Based on the publicly available details I've seen. 2/5
With the exception of the US-based trial, I am not aware of details on how these trials are being monitored. Is there a centralized DSMB? Are they combining the accrued data? They seem to have combined events across Brazil and UK. Why not the other countries? 3/5
Read 5 tweets
23 Nov
A short thread on vaccine efficacy versus vaccine effectiveness, covering:
- Idealized vs. real-world effects
- Direct vs. indirect effects
- Individual-level vs. population-level effects
- Phase III vs. Phase IV trials
👇👇👇
Phase 3 trials are conducted under idealized conditions. Everyone receives all doses on time, that have been properly stored, etc. The primary analysis is restricted, like to people without antibodies at baseline. We call the resulting estimate "vaccine efficacy." 2/8
Think "vaccine efficacy" as our best guess at the biological protection of the vaccine. When we talk about "vaccine effectiveness," this can refer to a few different things. One is "real-world effectiveness." If conditions are less than ideal, how well does the vaccine work? 3/8
Read 8 tweets
16 Nov
One question I had with the Pfizer results - is it possible that all cases were in younger (risk-taking) adults? Unlikely, but I couldn't tell. So it's great to see a breakdown of those 95 cases across different subpopulations. Representation is important! 6/10
Nice safety profile, and participants will continue to be followed. Remember - evaluation of vaccine safety never stops, even after vaccines are approved and deployed. We have an adverse event reporting system to continually monitor all vaccines. 7/10
Another key point - the Moderna vaccine has been formulated to not require the same intensive cold chain as Pfizer's vaccine (mRNA is unstable!). This has the potential to greatly simplify the logistics of rolling out the vaccine. 8/10
Read 7 tweets
16 Nov
Another exciting Monday morning for COVID-19 vaccines! Moderna is reporting 94.5% efficacy for their mRNA vaccine.

Read on for a biostatistician's breakdown of the interim results. 10 tweets on severe disease, subgroup analysis, and more.

Press release: investors.modernatx.com/news-releases/…
Of course, I'll start with the topline result of 94.5% efficacy (90 placebo cases, 5 vaccinated cases). For a high efficacy vaccine, 95 cases is a lot of data. In event-driven trials, the number of cases matters more than the number of participants. 2/10
Both Pfizer and Moderna's vaccines are mRNA-based. Thus, it's reasonable that results are similar. Still great to see! This is exciting because mRNA vaccines are designed for pandemics but were previously unproven. Adding a new tool to our toolbox! 3/10
Read 4 tweets

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