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27 Jun, 27 tweets, 7 min read
This paper was recently published, arguing that vaccines cause as much death as they prevent and so we should stop vaccinating people

I rarely say this, but it is truly awful and should be retracted as soon as possible 1/n
2/n The paper is here. It is truly woeful, but worth reading just to see how easy it can be to make a plausible-sounding argument if you are very free with your methodology mdpi.com/2076-393X/9/7/…
3/n The authors did two things - they calculated a Number Needed To Vaccinate (NNTV) from a propensity-matched cohort study done in Israel. They also calculated the number of deaths reported through the Dutch vaccine reporting system
4/n They then compared these two numbers, arguing that since the NNTV was almost equal to the number of deaths reported after vaccination in the Netherlands, vaccinations are not a good intervention
5/n The first obvious issue here is in the NNTV

It is not a great statistic, but here it is used in a WILDLY misleading way
6/n NNTV is easily calculated - you just divide 1 by the absolute risk difference between the vaccinated and unvaccinated groups. In the Israeli study, the risk of death was 0.006% higher in unvaccinated people, therefore the NNTV was 1/0.00006 = 16,667
7/n But here's the thing - this trial was only 6 weeks long. Fewer than 3% of the total population got COVID-19 in that time, compared to at least 30% of the entire of Israel over the last 12 months
8/n This means that the NNTV from this study is INHERENTLY MISLEADING unless you assume that vaccines will stop working entirely after the 6-week period (obviously false)
9/n If you extrapolate this efficacy out linearly, and assume that the RELATIVE risk of death after vaccination remains similar over time, at 52 weeks you'd get an NNTV of 1/((0.00006/6)*52) = 1 per 1,960
10/n If you assume that everyone who stays alive will get infected without a vaccine eventually - which is a fact - the ABSOLUTE risk difference approaches the RELATIVE risk difference, and so NNTV = 1/0.84 = 1.2

I.e. 1 life saved for every 1.2 vaccines given!
11/n (Note - this, too is misleading. The NNTV as time trends towards infinity in this population is high because they were older and sicker than the total population. For example, the NNTV for 10-year-olds will be 1,000 times higher than that for 60-year-olds)
12/n On the other side, the paper uses a vaccine adverse event reporting system to estimate the number of deaths 'caused' by the vaccine

This is absolute gibberish and a basic misunderstanding of epidemiology
13/n Vaccine event reporting systems are geared to identifying potential signals for alarm, and so usually anyone can report any event THAT HAPPENS AFTER VACCINATION to them
14/n In other words, these are events FOLLOWING vaccination, not events CAUSED BY vaccination

The website of the system even says this ~explicitly~
15/n So while the Israeli study was an attempt to causally link vaccination with outcomes, the Dutch registry explicitly does not do this

The deaths in this system may have nothing to do with the immunizations at all
16/n Using reporting systems like this is a common anti-vaccine trope. We KNOW that many of the events in the reporting system ARE NOT LINKED TO VACCINATION because we investigate them carefully
17/n Because of this, we have two awful, useless numbers being compared to each other. The true rate of deaths CAUSED by vaccines is 100sx lower than this paper calculates, and the number of deaths PREVENTED is 100sx higher
18/n Taking the highest death rate seen caused by a vaccine so far - Astrazeneca - we'd get around 1 death per 500,000 vaccinations

Using an NNTV assuming a 30% population prevalence, we'd get 1 life saved per ~500 vaccinations
19/n Now, neither of these metrics are necessarily useful in this way, and people will yell at me for doing this (rightly, it's a bit silly), but EVEN USING THIS FLAWED RUBRIC vaccines save 1,000x more lives than they cost
20/n Anyway, this study is flawed in so many basic ways that it's pretty irretrievable. It should be retracted as soon as possible to avoid further damage
21/n Another note, H/T to @ScottinVictoria - the reviewer comments are pretty astonishing to read. Not even a mention of why NNTV is worthless in this context, and no argument about the manifestly wrong use of adverse event reports mdpi.com/2076-393X/9/7/…
22/n Also worth pointing out that two members of the editorial board of the journal have resigned so far because of this terrible study
23/n also as a couple of people have pointed out, this tweet is incorrect. I mixed up the ARR of disease prevention with death, in actuality the ARR would approach the death rate in the population x 0.84 - in most places this would be about 1 per 100/200

24/n Oh, and because it always comes up in these discussions, I've never been paid a cent by any pharmaceutical company, all of my funding is through the Australian state and federal governments, the only additional income I get is from writing locked posts on Medium
25/n There is now an expression of concern published by the journal about the paper mdpi.com/2076-393X/9/7/…
26/n An interesting point about this paper is that it's actually a perfect example of how peer-review can fail. The people who reviewed the article assumed that the stats and methodology were reasonable, and based on that assumption recommended that it be published
27/n This is a prime example of what @jamesheathers and I wrote about recently - the study got through peer review, may be retracted, but the damage has already very much been done statnews.com/2021/06/08/sci…

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More from @GidMK

24 Jun
HOW TO REDUCE YOUR COFFEE INTAKE FOR A BETTER LIFE

STEP 1: NO

☕️☕️☕️☕️☕️
If anyone's wondering, while there are few/no health benefits directly attributable to drinking coffee, there is also consistent evidence that even quite high intakes are unlikely to be harmful to your health
(Obviously this is not a blanket endorsement, if your doctor tells you to drink less coffee you probably should. If your naturopath tells you to drink less coffee, on the other hand, you should stop seeing a naturopath)
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22 Jun
The vast outrage over the "unfairness" of a transgender athlete competing at the Olympics makes very little sense when you consider that;

a) she is ranked 4th
b) she is the first trans athlete to compete at the Olympics EVER
"But she has a biologically male body!"

Try defining a "male" body in a way that doesn't exclude a large proportion of elite female athletes. The IOC has been trying to do this for decades and it's VERY HARD
The fact is that most elite athletes have biological advantages (how many 5'2" people play basketball professionally?). It's up to us to decide what is "unfair"
Read 4 tweets
22 Jun
This new systematic review/meta-analysis of ivermectin for COVID-19 has come out, and everyone's asking me to review it

My take - decent study, but the devil's in the details 1/n
2/n The study is here. Because it's about ivermectin, and people are super weird about that specific drug, everyone's going wild with an Altmetric of 8,641 in the week since publication journals.lww.com/americantherap…
3/n I should say that my position on ivermectin previously has been that there is some interesting evidence but that most of the studies are low quality so it's hard to say much (even the one or two high-quality studies aren't very conclusive)
Read 30 tweets
21 Jun
Occasionally people ask how to argue well on the internet, so I'd like to introduce you to the two simple rules for productive internet conversations:

1. Always reply calmly
2. Never assume ill intent
Number 1 is first because it is the most important - DO NOT REPLY ANGRILY

Take a moment

Take a breath

THEN reply
If this takes an hour, a day, a week - so be it. When you reply angrily, you derail the conversation and it becomes a waste of time
Read 10 tweets
21 Jun
A useful point to show why vaccines are so important - even though this is WELL below herd immunity rates, the vaccines already done so far in NSW have probably slowed down this outbreak significantly
Let's think this through - @NSWHealth reports 1.9m vaccine doses, which based on previous figures is probably ~1.5m first and .4m second doses

With a population of 8.2m, that's about 20% of the population vaccinated at least once
Let's assume that all of this was Astrazeneca, with an estimated vaccine efficacy (protection against infection) of somewhere around 70%, and think about some different scenarios of the reproductive number (R)
Read 11 tweets
17 Jun
Another day, another viral article being cited as proof that ivermectin can cure COVID-19

The newest example is even more depressing than previous ones somehow 1/n
2/n The paper is here, and mostly it's just a perspective piece in a minor Nature offshoot (Journal of Antibiotics, IF 2.4) written by two members of what I can only describe as a pro-ivermectin advocacy group
nature.com/articles/s4142…
3/n The advocacy group is called Front Line COVID Critical Care Alliance, and has a very flashy website that basically advocates for ivermectin (and vitamin D, melatonin, and mouthwash) as the cure of all COVID ills
Read 15 tweets

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