Comparison of immune response of vaccination with natural infection

1. Memory cells remains stable in number over the first 5 to 6 months in both groups

2. Memory cells continue to evolve with increased somatic mutation & emergence of unique clones

1/

nature.com/articles/s4158…
3. After natural infection, neutralising breath of memory antibodies increases with time, not much increase noted in the vaccine group.

4. We do not know yet if a third dose (or breakthrough infection) after 2-dose vaccination will generate more memory B cells

2/
5. In both groups (natural infection & vaccine), affinity maturation increased 3-7.5 fold at 5-6 months.

6. In the vaccine group, affinity increased 4.5 fold, while in natural infection it increased 11.2 fold at 5-6 months

3/
7. Memory antibodies from natural infection increased in neutralising activity at one year, this was not noticed in vaccination group.

8. IgG memory B cells increased in number after second dose, this continued to evolve up to 5 months (limit of observation)

4/
9. The total amount of IgG and IgA decreased 4.3 fold in over a five month period after vaccination.

10. After the first dose, greater antibody production noted in younger people, but this difference was erased after the second dose.

5/
11. Neutralising antibodies correlated with IgG anti RBD binding antibody titres at five months.

12. Ratio of binding to neutralising antibody was higher at 1.3 months of vaccination compared to natural infection, but this difference was erased over time.

6/
13. Against variants, there was a 5.7, 1.8, 1.4, 2.7 x fold lower neutralising activity against beta, alpha, Gama and Delta variants respectively, compare to original virus.

14. The ~5 month study observed 32 immune naive individuals who got Moderna(8) or Pfizer vaccine(24).

7/
In summary, this paper compared to the post-vaccination immune response with natural infection.

Memory cells remain stable in both instances. The main difference was a greater breadth of neutralisation for natural infection.

8/
How this difference plays out in real life will also be important, because immunology descriptions do not always translate literally into clinical outcomes. This is due to the unquantifiable complexity of our immune response, & the relationships interlinking each component.

9/9

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More from @RajeevJayadevan

10 Oct
Vaccinated people have higher infection rates than unvaccinated - among all age groups over 30.

This is data from Public Health England. Rate is per 100,000.

Original graphs from PHE attached, reference link on thread.

Thanks @tlowdon

1/5
At the same time, vaccinated individuals are less likely to be admitted to hospital, or die from COVID-19.

The reported death protection is likely to be an underestimation, because vaccination preferentially occurs among people who have more background illnesses.

2/
The question is why the rate of infection is higher among vaccinated people.

It is obvious by now that vaccines aren’t very good at stopping the virus from entering the nose or throat, particularly past the initial few weeks of high antibody titres.

3/
Read 7 tweets
10 Oct
Opinion of an immunologist about COVID-19 in children.

He believes that children must be vaccinated before attending school in person.

While that is his opinion as an immunologist, there are several pitfalls here.

I had done a detailed thread earlier. Will link it below.👇
Whether Children should be vaccinated before attending school is a topic where not everyone agrees upon.

In other words this is not a binary topic; which means that a “yes or no” answer is not relevant.

That is why the opinion of doctors who take care of patients matter.

2/
Experience in my part of India on the ground has overwhelmingly stated the following facts.

1. Regardless of what immunology says, the chance that a child will fall sick from COVID-19 is so rare - it is much rarer than chance of death from many routine things in life.

3/
Read 13 tweets
8 Oct
Vaccination of healthy children not necessary before opening schools, writes @DrLahariya

1. Severe disease risk close to zero (exceptions don’t define policy)
2. Current vaccines not very effective in blocking virus infection in nose

1/

theindiaforum.in/article/reopen… @TheIndiaForum
When we view the outside world while standing in the ICU, it is easy to be tricked into believing that the whole world is falling severely ill.

It is true that a tiny % of children fall ill, but that % is less than 0.008 (Kerala) and is ~made up of children with comorbidity.
2/
Which is why if we only look at the severely ill children, we will not be able to see the massive denominator of healthy children who were not affected significantly by the virus.

3/
Read 14 tweets
7 Oct
T cell response in Astrazeneca vaccine recipients.

Study of 296 people aged 18 to 85 years.

Thread 👇

There has been plenty of discussion about antibodies following vaccination but studies of T cell response are uncommon. This paper gives details.

1/

science.org/doi/10.1126/sc…
Optimal T cell response was detected - that is CD4 Th1 and CD8 with a high degree of polyfunctionality, covering a broad range of spike protein epitopes.

2/
This increased T cell breadth will help fight variants. In other words, a few viral mutations here or there will not make a difference to these T cells.

This means the virus will continue to be hunted down even if it modified its appearance to gain entry into the body.

3/
Read 7 tweets
2 Oct
Should we be shutting down borders and closing economies any more?

Genomic sequencing from Rwanda tracks arrival of variants from surrounding regions (the process is bidirectional)

But did such restrictions:

1. make any long-term difference?
2. stop VOC from taking over?

1/4
Such measures, taken by several nations in 2020, were justifiable due to a fear of the unknown. Now that we have 21 months of data, it is time to sit down & see if they made any difference.

We must also not forget that it is the SAME virus, regardless of fancy Greek names.

2/4
The problem with variants of concern is two-fold.

1. They take a long time to show their true colours. Thus, by the time they are declared as VOC, modern travel would have taken them all around the world.

2. Even a single introduction is enough to infect a whole country.

3/4
Read 4 tweets
1 Oct
This thread shows instances of fully vaccinated people picking up (and spreading) infections. Apart from very low baseline risk, this is one more good reason why universal COVID vaccination for healthy children isn’t advisable. See UK study linked below. @GKangInd @doctorsoumya
Vaccinating healthy children will not stop them from picking up or spreading the virus. Such protection won’t last >3 months.

see thread above👆 for context

@ProfSomashekhar @PIB_India @DrLahariya @RemaNagarajan @IMAIndiaOrg @jayalal10 @dr_Sulphi_Noohu @drbabukv @VeenaGeorge03
Link to UK study.
(see thread above👆 for context)
Read 5 tweets

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