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Jul 20, 2022 31 tweets 13 min read Read on X
It has been 2 months since the first cases were reported in the MPX multi-country outbreak, & the # of cases has now crossed 14k globally. While accurate information is critical to staying ahead, there is so much misinformation. An update on the current status of #monkeypox.🧵
Epidemiology:
Overall, over 14k MPX cases have been detected in 70 countries. 7 African countries have reported ~1400 cases this year. Some “non-endemic” countries are seeing cases w/o travel links or exporting cases, indicating ongoing community transmission. (n/1) Image
• 99.5% of cases are among men (where data available) 
• The mean age is 37
• Evidence continues to suggest community transmission with a disproportionate incidence among gay, bisexual and other men who have sex with men (GBMSM) gov.uk/government/pub…  (n/2) Image
Interconnected & dense networks of highly mobile individuals align w/ what we’ve seen so far with MPX. Disproportionate onward transmission can explain the sustained growth rather than increased transmissibility, as also shown by @sbfnk et al. (n/3)
 medrxiv.org/content/10.110… Image
Despite widespread speculations to the contrary, MPX predominantly occurring among GBMSM isn’t driven by ascertainment or sampling bias. According to the data by @UKHSA, we can see that the positivity rate among men is considerably high compared to women & children. (n/4) Image
Although we will see infections beyond GBMSM, it will likely be self-limiting given the differences in network patterns. But, we may see concentrated epidemics if it’s introduced to high-risk heterosexual networks, which are impacted by racism, poverty & oppression. (n/5)
Transmission dynamics:
The incubation period matches historical data w/ a median of 9d. Epi evidence suggests that likelihood of transmission is stronger w/ prolonged close contact as opposed to via exposure to common surfaces like desks, chairs, or public toilets. (n/6) ImageImage
Theoretically, MPX can be transmitted to anyone through contact with body fluids, monkeypox lesions, or shared items. But, as per epi data, MPX clearly doesn’t transmit as readily as through intimate close contact. Here are some thoughts about why this might be. (n/7) Image
Also, transmission risk is multidimensional. Prolonged close contact seems to be key in transmission, but different exposures are not equally effective. The combination of network & contact patterns, exposure route & biology result in MPX disproportionally affecting GBMSM. (n/8) Image
Virology:
We would never expect current sequences to be 100% identical to the past ones. Question is whether the changes observed are within the expected range or not. It is challenging b/c we don’t have a good understanding of the MPX mutation rate. (n/9)
48 SNP changes were detected compared to the 2018 sequences; 27 of these mutations are silent in that they do not change any of the viral proteins. There’s also a good chance these mutations aren’t adaptive. (n/10)
If we account for APOBEC signalling, 42 fit the APOBEC, 3 fit a non-canonical APOBEC, and 2 don’t fit APOBEC. So, we perhaps have 2-5 mutations in 4 years, which fits the DNA virus expectation for the # of mutations. (n/11) Image
So, while the discussions are ongoing and more work is needed to understand the function of these mutations, ongoing data suggest that MPX has not *recently* become more transmissible. If something did occur, it would have occurred back in ~2017, rather than more recently. (n/12)
Interestingly, a case with a travel link to East Africa or the Middle East was identified with a distinct sequence in the US. If a non-endemic country exports a case, there is a big chance of ongoing community transmission. (n/13)
So, it is likely that African outbreak is much more widespread than we’ve recognised. MPX has been escalating for many years in Africa, but these warning signs were largely overlooked. (n/14)
Clinical presentation:
During the current outbreak, many cases have been described as having ‘atypical’ presentations w/ localised or solitary genital lesions or even proctitis alone. There are several explanations for these observed differences in presentation. (n/15)
1- We had limited knowledge about MPX until now. Given the differences in access to care & health-seeking behaviour in LMICs, probably previously reported cases were on the severe spectrum. So, we may, in fact, be seeing the whole range of MPX disease now. (n/16)
2- According to the previous reports, the site of clinical presentation mostly depends on the inoculation site. Given that the current epidemic is spread mainly via intimate sexual contact, the lesions seen in the genital area are likely a result of direct inoculation. (n/17) Image
3- Clinical presentation may be associated w/ virus load & illness severity. In DRC, primary household cases had higher lesion # than secondary household cases. They’ve noted a relationship btw severity & lesion counts independent of body location. (n/18) doi.org/10.1101/2022.0…
In summary, the current clinical presentation may not be distinct compared to the historical MPX description, especially the Nigerian outbreak, if we factor in healthcare access, the influence of exposure site, host factors and severity of illness on clinical presentation. (n/19)
There are many opportunities but also many challenges in controlling this outbreak. Limited testing, and the lack of resources to support self-isolation & already overburdened sexual health services to care for the increasing MPX load continue to be the biggest obstacles. (n/20) Image
Especially when the time to diagnosis is prolonged, patients suffer. Mainstay of treatment is supportive care, but symptoms like pain, which can be debilitating, can be successfully managed in the hospital with pain management and antivirals. Patients deserve better. (n/21)
There are big knowledge gaps in clinical management. Our recent analysis highlights a lack of up-to-date & evidence-based clinical management guidelines, which has implications for patient management. (n/22) @isaric medrxiv.org/content/10.110…
In summary, current outbreak continues to be the biggest MPX outbreak outside of Africa. But, important to remember that MPX is not SARS-CoV-2, and it requires a very different public health response. (n/23)
So, we should continue to inform those most at risk of MPX & that the virus can be transmitted through intimate /household contact. While we will observe infections in the non-MSM population, the risk of significant transmission in the broader public continues to be low. (n/24)
In theory, anyone can get MPX, but the risk is not the same for every person/ exposure. The narrative that MPX can affect everyone equally diverts attention away from addressing unmet needs. It’s a good PH practice to focus resources where it’s needed the most. (n/25)
Appreciation to many people working tirelessly on the ground, from clinical management, epi, and contact tracing to research and policy response. Especially great thanks to the SH/GUM teams & @UKHSA @bhiva @bashh & community groups leading the response in the UK. (n/26)
Ultimately still a lot to learn about the full spectrum of MPX disease, the relationship btw viral dose & disease presentation, transmission routes, MPX evolution & management. In the meantime, all resources must be directed to stop the outbreak in the most at-risk groups (n/27)
Absolutely. Understanding the duration of protection after infection/vax is critical. The role of condom use in reducing (rather than preventing) tx is important as well - pls note there are reports of cases acquiring MPX via non-penetrative sex, but it may reduce the risk.
A NEW analysis of 528 #monkeypox infections in 16 countries by @profchloeorkin: 98% were GBMSM, 95% thought to acquire it during sex, and importantly patients presented predominantly w/ mucosal lesions (mouth, genital, anal/perianal, throat). @NEJM nejm.org/doi/full/10.10… ImageImageImageImage
Painful lesions in the mouth, rectum, & difficulty swallowing as primary presenting complaint likely represents the inoculation site & suggests sexual activity as the suspected transmission route. All HCPs need to be aware of this diverse symptom profile.

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More from @mugecevik

May 21, 2022
As the monkeypox virus (MPX) outbreak continues, a lot of data emerging in real-time & being rapidly disseminated (as well as misinformation). I complied the unfolding scientific data (with direct links to papers and threads) on what we (don’t) know so far. #IDTwitter 🧵(1/n)
First, MPXV is not a novel virus. It is a viral zoonosis first discovered in 1958, with the first human infection reported in 1970. It is classified as a high priority pathogen by WHO, cases mostly identified in central & western Africa until now. (2/n) (who.int/news-room/fact…\)
Confirmed and suspected cases of #MonkeyPox now reached 145 among 13 countries with 20 cases in the UK. The main concern is that there are non-travel associated cases in Europe, meaning there is likely unnoticed community transmission. (3/n)
Read 29 tweets
Apr 25, 2022
Late breaker session at #ECCMID2022 on acute hepatitis cases of unknown origin in children.
So far, 169 cases have been reported from 11 countries since first case was identified in 31 March. 17 have required liver transplant & at least one death has been reported. #IDTwitter
Almost all cases had high transaminases, majority of children have been hospitalised. No common exposure has been identified, no link to COVID19 vaccination. Adenovirus F41 was identified in several cases, but it doesn’t fully explain the clinical severity observed. #ECCMID2022
But there are still many uncertainties about acute hepatitis cases observed. Especially the # of cases, exact age group, clinical presentation, uncertain test results as not all cases were tested for adenovirus, risk factors and transmission routes remain unclear. #ECCMID2022
Read 15 tweets
Dec 15, 2021
Very interesting analyses about the virology of #Omicron, which may explain the faster spread of this variant.

According to a new lab study, Omicron infects & multiplies ~70x faster than the Delta variant and the wild type SARS-CoV-2 in the human bronchus, but not in the lung.
In this ex vivo study (press release), Michael Chan, Malik Peiris & John Nicholls et al. @hkumed show that at 24h after infection Omicron replicated ~70x faster than Delta in bronchus. Interestingly, it replicated ~10x less efficiently in the lung tissue. hkumed.hk/96b127/
Another analysis by @BalazsLab also supports these findings. In this lab study w/ pseudoviruses, Omicron showed greater ability to infect cells than other variants, which was ~ 4 times more infectious than the original strain, also more than Delta. medrxiv.org/content/10.110…
Read 8 tweets
Dec 7, 2021
Important preliminary data from SA looking at whether vaccine elicited antibodies are still effective against #Omicron.

Good & bad news: There is a big drop in neutralisation activity, but it's partial & hybrid (vax + infection) holds fairly well. 🧵

This is a live virus neutralisation assay. Neutralisation studies can tell us whether levels of Ab in the blood (convalescent and vaccinated plasma) are high enough to prevent the virus from infecting cells in the lab.

.@sigallab & colleagues tested plasma from those who received vax only (orange) & those who had vax + previous infection (green) and showed a significant (~40x) decline in neutralisation activity, but this was not a complete escape & reduction was less in hybrid anti-sera.
Read 15 tweets
Dec 3, 2021
🦠 There’s a lot we don’t yet understand about Omicron, including its impact on immunity and what it means for vaccines. New data will be emerging over the next few wks, which could be misinterpreted w/o context. What we might expect & how to interpret the emerging data? 🧵(1/n)
1- Genomic data:
The biggest concern with omicron is that it contains >30 mutations in just the spike protein, the part which helps it enter human cells and the target for vaccines. This mutation profile is very different than other VOCs. (2/n) Image
There are plausible biological consequences of some of these mutations, but we don't really know the combined effect of all these mutations, so full significance of omicron is uncertain. (3/n) Image
Read 37 tweets
Aug 24, 2021
There is a lot of concern/confusion about vaccine effectiveness against the delta variant. How effective are the vaccines against Delta & how to interpret real-world observational data? So much misinformation is being circulated, so this thread brings key data together. 🧵(1/n)
Vaccine efficacy measures the relative reduction in infection/disease for the vaccinated vs unvaccinated arm. For instance, a vaccine that eliminates all risk would have an efficacy of 100%. Efficacy of 50% means you have a 50% reduced risk compared to an unvaxxed person. (2/n) Image
All studies assessing the performance of vaccines against Delta are based on real-world data (vaccine effectiveness), which are influenced by variant transmissibility, human behaviour, and immunity status of the population, therefore they require careful interpretation. (3/n) Image
Read 25 tweets

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