Ilya Shabanov Profile picture
Jan 11, 2023 β€’ 18 tweets β€’ 11 min read β€’ Read on X
Read less – learn more.

Cut down your PhD or literature review reading list by 75%:

Here is a simple 3-step workflow:
πŸ§΅πŸ‘‡

#AcademicChatter #ScienceTwitter #AcademicTwitter
We will use the 80/20 principle and identify the 20% top papers from these 3 categories:

β–Ί Most Cited: Foundational, often dated work

β–Ί Most Recent: Cutting edge, often no citations

β–Ί Most References: Review papers

It's super easy with @LitmapsApp. (free acct is enough)
@LitmapsApp 1. Navigate to "Your Library" in Litmaps.

Your library is organised in collections, or folders containing your papers.

(If you're using Zotero, Mendeley etc, I'll show you how to import into litmaps in a second. )
@LitmapsApp 2. Create a collection

A collection is just a folder where you store references. i.e. papers.

As fas as I know, there are no limits on folders or contents in the free version of litmaps. So the free version is enough for this workflow.
@LitmapsApp 3. Import your paper collection

You can either export from Zotero, Mendeley, Paperpile, or do it by hand and type in titles and DOIs.

I assume you have a lot of papers here.
In my example we "only" have 45. But even that would probably take me 2-3 weeks to go through.
@LitmapsApp 4. Zotero β†’ Litmaps

Here is how you go from Zotero to Litmaps.

The same export-import flow will work for Mendeley, Paperpile or whatever you are using.

End result: Our papers are now in the collection!
@LitmapsApp 5. Create a "reading list" collection

We will start putting our selected papers in here.

I call it "Reading List + Date"
@LitmapsApp 6. Filter I: Most Recent

Sort by Year, pick a few papers, add them to our reading list collection.

These papers represent WHERE THE FIELD IS AT.

Use your best judgement to identify what is relevant - don't just take the top ones.

Click on a paper to bring up the abstract.
@LitmapsApp 7. Filter II: Pick out Review Papers

Sort by "Reference #".

Usually review papers will have more citations than others - but not always. Use best judgement.

"McGlone 2022" in my example now is a review + recent (notice the icon color).
Strong indicator to read it first!
@LitmapsApp 8. Filter III: Foundational Papers

Papers that everyone knows in the field, will have high citations.

Sort by "Cited By #" and again pick a few from the top. (Aim at picking no more than 10%)

These papers will usually also be the oldest ones and you should know them!
@LitmapsApp 9. We have shortened our reading list

Depending on how "greedy" you are you will shorten your list by more or less.

Here I identified the 40% best papers, saving me potentially weeks.

To see how they are connected, click on "View as Map" in your "Reading List Collection".
@LitmapsApp 10. Map

The layout corresponds to our 3 parameters:

X-axis: Date of paper
Y-axis: Number of References (Reviews)
Size of circles: Number of citations.

Here you see how the papers are connected.
Identify the most "central" ones.

Start your reading with these.
@LitmapsApp 11. Access any of the papers

Click on the paper in the map or in the overview.

Notice that there is a "view source" button, it will take you directly to the journal.
@LitmapsApp 12. Export from Litmaps

You can export your list back to Zotero for example.

One reason is that Zotero can download the PDFs (open access) automatically.

The other reason is that you are taking notes in Zotero - You shouldn't ⛔️

There are better ways ⬇️
@LitmapsApp As you read, take your notes using a system - you will understand & memorise them better.

Link these notes to create a network of understanding,
rather than multi coloured PDFs.

I developed this system of note taking using @obsdmd :

@LitmapsApp @obsdmd Use a visual manager with the Obsidian Canvas feature to organise your research as well.

@LitmapsApp @obsdmd Summary

β–Ί Import your papers into @LitmapsApp
β–Ί Sort by year, reference num and cited by
β–Ί Skim the top 10% papers from each category into a reading list
β–Ί Use the map view to identify the "central" papers in the reading list.
β–Ί Take notes with a system using @obsdmd
@LitmapsApp @obsdmd There it is, I hope it's useful.

But is it? You are mostly silent – Maybe this prompt will move you to leave a few thoughts in the comments!

In my profile you can find a link to my in-depth πŸ“© newsletter as well!

And! As a follower, dozens of tutorials like this await you.

β€’ β€’ β€’

Missing some Tweet in this thread? You can try to force a refresh
γ€€

Keep Current with Ilya Shabanov

Ilya Shabanov Profile picture

Stay in touch and get notified when new unrolls are available from this author!

Read all threads

This Thread may be Removed Anytime!

PDF

Twitter may remove this content at anytime! Save it as PDF for later use!

Try unrolling a thread yourself!

how to unroll video
  1. Follow @ThreadReaderApp to mention us!

  2. From a Twitter thread mention us with a keyword "unroll"
@threadreaderapp unroll

Practice here first or read more on our help page!

More from @Artifexx

May 9
The best researchers aren't geniuses. They're well-organized.

This is my favorite system to organize 1000s of notes.

Simple, yet powerful:
πŸ‘‡ Image
1. The Problem

Taking notes helps you remember only if you can find your notes.

My vault has almost 400k words over 1000+ notes (and countless PDFs/Screenshots).

To find things easier you need to have MULTIPLE layers of organization. Divide and conquer. Image
2. Folders do not work well.

In my experience folders just don't work. Because a note can't be part of multiple folders.

If you want to reuse notes for different "projects" inside your vault you need TAGS.

A Tag is just like a folder. But a note can be part of many tags! Image
Read 11 tweets
May 6
Struggling with remembering where you saved a note?

Use Rainbow Folders: A hidden feature in Obsidian.

Here is how:
πŸ‘‡ Image
Obsidian (@obsdmd) is a free software if you are serious about organizing knowledge (e.g. academics)

Organize by: Folders, Tags or Maps of Content

Rainbow folders gives every folder a color making them easier to find.

There are two modes: Backgrounds(Left) or Titles (Mid) Image
@obsdmd 1. Installing the right theme

Not every theme supports rainbow folders.

You will have to try out.

These two popular themes do support it.
- Chime (my recommended theme at the moment).
- AnuPpuccin Image
Read 7 tweets
Apr 27
Plagiarism is a serious problem in academia.

Even a misplaced citation can massively damage your reputation.

Luckily AI is great at spotting plagiarism. Here is how:
πŸ‘‡ Image
1. Plagiarism is complex

If you look at the Harvard Guide it identifies 6 types of plagiarism.

"Uncited paraphrase" might be the most difficult to spot.

Here you might mention established findings from older papers without citing them. Image
2. Check for Plagiarism

After you have written your manuscript (yourself!). You might still end up with a few unintended instances of plagiarism.

This is where @teampaperpal comes in.

Make an account on paperpal . com and click "Plagiarism Check" in the sidebar. Image
Read 7 tweets
Apr 22
Want to get more done at the end of the week?

Use SCRUM - a scheduling technique most companies use. It's perfect for academics.

Details in text below:
πŸ‘‡
Summary:

1. Create a backlog of tasks and assign a difficulty to each (1,2,4,8 for the number of hours it takes to complete)

2. Plan meetings and seminars etc as they also take time.

3. Before starting your week distribute the tasks from the backlog to the days of the week. Don't plan more than 8hr of work a day (or less if you have other commitments).

4. During the week: Check off what you have completed (and how long it took you).

5. At the end of the week: Understand what you got done and what you didn't.

Understand that if you didn't get everything done it is a planning error. It does not mean you need to work harder/more (this is just recipe for burnout and I have been there myself). It just means you need to plan better. Efficiency comes in relaxation.

Every day you manage to accomplish what you planned you will feel great about yourself.

6. Next week you can copy and paste the open tasks to the next week and start the process again. Some people prefer to have a bi-weekly instead.
What tools can you use?

There are dozens of tools for kanban boards. The simplest one is of course Trello.

Read 5 tweets
Apr 2
Don't have time to read a paper in detail?

Here is how to extract relevant information instantly:
πŸ‘‡ Image
The setup:

You have a rather large and relevant conceptual paper.

There are others and you are not sure if it's worth reading it.

You are however more interested in the "big picture" not the methods and details.
1. Upload the PDF to MyAIDrive(dot)com

Copy the link to the PDF.

MyAiDrive will analyze the PDF and make the results available in ChatGPT. Image
Read 8 tweets
Mar 26
Want to remember every paper you read?

Replace Zotero with a reference map and leverage your spatial memory.

Here is how:
πŸ‘‡

1. Reference manager vs map

Take a look at this screenshot: Which one looks more approachable and interesting? On the right is Zotero displaying all your papers in an endless list. On the left is a reference map.

Reference maps lay out your papers or PDFs in 2D on an endless surface called a "canvas" or "whiteboard". There are many tools that are capable of doing it: Obsidian is an obvious choice, Heptabase is great too, DrawIO is more complex but also good.

2. Zooming in and out / Finding things

Using the scroll wheel or pinch gesture you can fluidly navigate between the bird's eye view and the detailed view with your own notes on a single paper. Left: Detail, Right: All Papers.

To find papers you "fly up" and then "land on" the paper you are looking for. It feels incredibly natural and easier than scrolling through a list.

3. Why it works: Spatial Memory
Humans evolved moving around as hunter gatherers and spatial memory is a key trait needed for navigation. You leverage it by laying out your papers in a landscape, not a list. Your papers gain location and relation.

4. Headers and Topics: Location
Now that your papers are on a landscape or map you can have "countries" on this map. Every country is a topic, further subdivided in sub-topics. Here is the "Machine Learning Country" in the far south west of my map:

I can refer to "papers in the south west" - this is spatial memory being leveraged to remember where things are.

5. Semantic Connections: Relation

The next step is to build the "roads" between locations on the map. Simply draw an arrow and write on it what this relation signifies.

In the above example Swenson 2020 (top) wrote "the trait-demography relationship is weak (Yang 2018)".
So I read Yang 2018 (left) and added a connection. Later I found that (Lynn 2023) suggested a few solutions and linked those two as well.

By just looking at this map you can immediately write a sentence for your literature review. A narrative emerges and synthesis begins.

Summary:

Lay out papers on a spatial canvas using e.g. Obsidian instead of Zotero. Remembering them will be much easier because you can use your spatial memory. Synthesis starts happening automatically when you annotate connections between papers.

Do you do something like this?
Share a screenshot with us!Image
Image
Image
Image
This is one of the methods you can learn about in my upcoming webinar:

In this post I mentioned Heptabase and Obsidian as tools to achieve this results.

Here is a comparison between those two:

effortlessacademic.com/note-taking-to…
Read 4 tweets

Did Thread Reader help you today?

Support us! We are indie developers!


This site is made by just two indie developers on a laptop doing marketing, support and development! Read more about the story.

Become a Premium Member ($3/month or $30/year) and get exclusive features!

Become Premium

Don't want to be a Premium member but still want to support us?

Make a small donation by buying us coffee ($5) or help with server cost ($10)

Donate via Paypal

Or Donate anonymously using crypto!

Ethereum

0xfe58350B80634f60Fa6Dc149a72b4DFbc17D341E copy

Bitcoin

3ATGMxNzCUFzxpMCHL5sWSt4DVtS8UqXpi copy

Thank you for your support!

Follow Us!

:(