John Bye Profile picture
2 Nov, 11 tweets, 4 min read
The government claims to have hit its target of expanding lab capacity to 500,000 "virus" tests a day.

As with their 100,000 tests a day target in April though, there's been a rather suspicious last minute surge to reach the target which, just a week ago, looked hopeless.
Back in April the government pulled this off by counting 40,000 tests they'd put in the post as "done", even though they hadn't been used and actually processed in a lab yet.

In fact, we now know they didn't really hit 100,000 tests a day until May 20th.

The latest surge comes almost entirely from Pillar 1 (NHS and PHE) lab capacity.

This hasn't increased AT ALL for 4 months, but now we're expected to believe it suddenly doubled in 4 days, just in time to hit an arbitrary target.

And oddly none of this capacity is being used.
The Health Service Journal reports that "new diagnostic equipment and supplies .. had gone to labs over recent weeks, and a lot of it was declared by NHS England this week, ahead of the 31 October deadline".

It's not clear if it's all really usable yet.

Some NHS lab staff have said that new kit has been delivered, but is still sitting in boxes because there aren't any engineers to install it, or they don't have enough space or staff in the lab to actually use it.

Is this being counted as "capacity" yet?

Even once they're installed, they aren't necessarily adding to practical capacity. New kit needs to be validated before it's put to use, and staff trained to use it.

Then you need enough reagents and other supplies to keep it running.

All of this is taking its toll on NHS lab staff, who were already working flat out to keep up with demand for testing.

Some are reporting having to get multiple new testing platforms up and running to boost capacity far beyond original plans, while struggling to get enough supplies to keep their existing kit running.

And this seems to be making things worse rather than better, with reports that turn around times for tests in NHS labs (which have always been much faster than Pillar 2 labs) may be suffering.

If so, this will show up in the Test & Trace reports soon.

What makes this worse is that the added pressure on the NHS (which is adding far more lab capacity than originally expected) may be because of failures in the Lighthouse Lab system, where new labs all seem to be running two months behind schedule.

The real test will be whether this level of lab capacity is sustained in the coming weeks, and whether the actual number of tests being processed matches it.

At the moment though most of the new capacity seems to be theoretical, with little increase in actual testing so far.

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More from @_johnbye

3 Nov
A lot of covid sceptics are sharing this story today.

The first claim it makes (about a "dodgy hospital heatmap") is very obviously wrong though.

The Daily Mail is either deliberately trying to mislead people or (just as likely) doesn't understand what it's talking about.
They say 232 of 482 English hospitals had NO covid patients on October 27th.

But the vast majority of those have NEVER had covid patients, because they're private hospitals, mental health units, specialist hospitals etc, many with no general or acute care beds to put them in!
175 of the 232 hospitals without covid patients are private hospitals (including cosmetic surgeries and mental health centres).

Unsurprisingly, 170 of them haven't had a single covid patient in at least the last 3 months. Because that's not what private hospitals generally do.
Read 7 tweets
13 Oct
One of these women is a BBC journalist.

The other is the Chairman of the Conservative Party.

Spot the difference:
Tom Newton Dunn of Times Radio (and formerly the Sun) seems to have edged the field, managing to copy and paste the latest message from Dominic Cummings (sorry, Sr Guv Source) at 19:46.

Conservative Chair Amanda Milling came in second at 19:57.

Read 6 tweets
13 Oct
Yesterday's announcement of new regional restrictions to slow the spread of coronavirus went well...

First they did their usual trick of briefing the press before the MPs, councils and public health officials whose areas are affected.

Then they seem to have forgotten to invite some of the MPs representing those areas to the briefing.

Then local leaders said they hadn't actually agreed with all of the new measures.

Central government told them what the new restrictions would be, didn't show them the data behind it, and then there was an argument about financial support.

Read 5 tweets
10 Oct
Some people still seem convinced the recent surge in covid-19 cases is caused by "false positives" (people who don't have the virus but still test positive due to various issues), often claiming 90% of reported cases aren't real.

This argument doesn't hold water.

Here's why...
A lot of this goes back to a quote from Matt Hancock that the false positive rate was "under 1%".

Some assumed the rate was close to 1%, which would mean if you test 200,000 people a day who (mostly) don't have the virus, you'd get 2,000 false positives.

The first problem with this argument is the number of cases went up faster than the number of tests done.

That means the % of tests coming back positive went up.

But the % of tests giving a false positive shouldn't have changed.

So the % of true positives MUST have gone up.
Read 12 tweets
10 Oct
The Lighthouse Lab in Newport, originally promised to come online by the end of August, finally opened this week.

It's the first new Pillar 2 lab to open in FOUR months.

And the next lab that was due to open is delayed too!

bbc.co.uk/news/uk-wales-…
As I pointed out last month, the government utterly failed to increase lab capacity over the summer, despite rising demand (much of it driven by their own policies).

Pillar 1 capacity has barely changed since July 7.
Pillar 2 capacity stalled on June 14!

As Lighthouse Labs handling Pillar 2 (community) testing hit capacity in late August, the government started paying private labs (most in the EU) to handle excess tests.

This accounted for ALL of the increase in Pillar 2 capacity over the next two weeks.

Read 9 tweets
8 Oct
This week's Test & Trace report is out, showing the impact of the 16,000 test results that were mislaid in the last week of September.

As if that wasn't bad enough, a HUGE number of tests hadn't given a result by the end of the week, and last week's backlog has been abandoned.
The number of people testing positive continues to rise sharply, but the number of cases referred to Test & Trace didn't.

There's a shortfall of 16,981 cases - far more than usual.

Only two thirds of people who tested positive that week were referred to Test & Trace!
This seems to be largely due to 16,000 cases that were missed because the old version of Excel that PHE use to import data from Pillar 2 labs ran out of rows!

The extra cases were finally referred to T&T last weekend and should be in next week's report.

Read 14 tweets

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