Latest SARS-CoV-2 lineage of concern report for 2021-01-19 now available at cov-lineages.org/global_report.… @arambaut @viralverity @MOUGK @EvolveDotZoo
pangolin assigned B.1.1.7 to 18,070 sequences on GISAID, 16,982 of which are from the UK. There are 40 countries in total with sequences assigned B.1.1.7 by pangolin. Newly represented is Iran (1), report date from 2021-01-05.
pangolin assigned lineage B.1.351 to 538 sequences on GISAID from 13 countries. @Tuliodna @houzhou
In addition to the sequences previously assigned P.1 from Brazil and Japan, pangolin assigned lineage P.1 to a sequence from South Korea (sample date 2021-01-10). @nmrfaria
As of today 2021-01-19, 58 countries in total have reported cases of B.1.1.7 (40 of which with B.1.1.7 sequences on GISAID). Morocco reports a case of B.1.1.7, report here: dailysabah.com/world/mid-east… thanks @SheLuvAva!
A total of 23 countries have reported cases of lineage B.1.351 (13 of them represented by sequences on GISAID).
A total of 4 countries have reported cases of lineage P.1, 3 of which now have sequences on GISAID: Brazil, Japan, Italy and South Korea. We show updated counts of P.1 sequences on passenger volumes from Manaus in the month of October (more recent flight data not yet available).
As always, please alert us to any reports of lineages B.1.1.7, B.1.351 or P.1 that we may not have covered either via Twitter or GitHub PR here: github.com/cov-lineages/g…
Find the full report for 2021-01-19 at: cov-lineages.org/global_report.…

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More from @AineToole

21 Jan
Today's SARS-CoV-2 lineage of concern report for 2021-01-21 now available at cov-lineages.org/global_report.…
@arambaut @viralverity @edwardcholmes @EvolveDotZoo @MOUGK Image
pangolin assigned B.1.1.7 to 24,737 sequences on GISAID. There are now 44 countries with public B.1.1.7 sequences. Austria (42), Czech_Republic (10) and Poland (1) are now represented by B.1.1.7 sequences on GISAID. ImageImageImageImage
pangolin assigned lineage B.1.351 to 562 sequences on GISAID from 17 countries, with Spain newly represented (1). @houzhou ImageImageImageImage
Read 9 tweets
20 Jan
Updated SARS-CoV-2 lineage of concern report for 2021-01-20 available at cov-lineages.org/global_report.…
@arambaut @viralverity @EvolveDotZoo @MOUGK @edwardcholmes Image
pangolin assigned B.1.1.7 to 22,136 sequences on GISAID, 20,832 of which are from the UK. There are 41 countries in total with sequences assigned B.1.1.7 by pangolin. Newly represented is Argentina (1), sample taken on 2020-12-21. ImageImageImageImage
pangolin assigned lineage B.1.351 to 555 sequences on GISAID from 16 countries. Newly represented on GISAID are Belgium (6), New Zealand (1) and Denmark (1) @houzhou ImageImageImageImage
Read 9 tweets
18 Jan
Latest SARS-CoV-2 lineage of concern report for 2021-01-18 now available at cov-lineages.org/global_report.…
@arambaut @EvolveDotZoo @viralverity @MOUGK
pangolin assigned B.1.1.7 to 17,847 sequences on GISAID, 16,847 of which are from the UK. There are 39 countries in total with sequences assigned B.1.1.7 by pangolin. Newly represented is Peru (1), sample date from 2020-12-31.
pangolin assigned lineage B.1.351 to 530 sequences on GISAID from 13 countries, no increase from yesterday.
@Tuliodna @houzhou
Read 8 tweets
17 Jan
Latest SARS-CoV-2 lineage of concern report for 2021-01-17 now available at cov-lineages.org/global_report.…
@arambaut @viralverity @EvolveDotZoo @MOUGK
As of today, there are 17,815 B.1.1.7 sequences on GISAID. 16,847 of which are from the UK. There are 38 countries in total with sequences assigned B.1.1.7 by pangolin.
pangolin assigned lineage B.1.351 to 529 sequences on GISAID from 13 countries, no increase from yesterday.
@Tuliodna @houzhou
Read 6 tweets
16 Jan
Latest SARS-CoV-2 lineage of concern report for 2021-01-16 now available at cov-lineages.org/global_report.…
@EvolveDotZoo @arambaut @viralverity @edwardcholmes @MOUGK
As of today, there are 17,782 B.1.1.7 sequences on GISAID. 16,847 of these are from the UK, but there are 38 countries in total with sequences assigned B.1.1.7 by pangolin. In addition to countries previously represented, Hungary (5) and Iceland (14) now share B.1.1.7 sequences.
pangolin assigned lineage B.1.351 to 529 sequences on GISAID from 13 countries.
(@Tuliodna @houzhou variant 501Y.V2)
Read 8 tweets
15 Jan
Latest SARS-CoV-2 report for 2021-01-15 now available at cov-lineages.org/global_report.… @EvolveDotZoo @arambaut @viralverity @edwardcholmes @MOUGK
As of today, there are 17,677 B.1.1.7 sequences on GISAID. 16,782 of these are from the UK, but there are 36 countries in total with sequences assigned B.1.1.7 by pangolin.
pangolin assigned lineage B.1.351 to 476 sequences on GISAID from 13 countries. (@Tuliodna @houzhou variant 501Y.V2)
Read 8 tweets

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