Today's SARS-CoV-2 lineage of concern report for 2021-01-31 now available at cov-lineages.org/global_report.… @arambaut @viralverity @MOUGK @EvolveDotZoo @edwardcholmes
A total of 73 countries have reported cases of B.1.1.7 (55 of which have sequences on GISAID).
In total, B.1.1.7 was assigned to 37,874 sequences on GISAID from 55 countries. There are now B.1.1.7 sequences from Kuwait and Bangladesh on GISAID. Our access to records has a slight lag, and there are actually 3 B.1.1.7 sequences from Bangladesh as of today @senjutisaha
31 countries have reported cases of lineage B.1.351 (23 represented by sequences on GISAID).
B.1.351 was assigned by pangolin to 750 sequences. 519 of those sequences are from South Africa.
There are confirmed reports of lineage P.1 from a total of 9 countries, 6 of those represented by sequences on GISAID.
A total of 40 P.1 sequences are on GISAID: Brazil 30, Japan 4, Italy 3, Faroe_Islands 1, USA 1, South_Korea 1
As always, please alert us of any reports of lineages of concern that we may not have covered either via Twitter or GitHub pull request here: github.com/cov-lineages/g…
Find the full lineage of concern report for 2021-01-31 here: cov-lineages.org/global_report.…

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More from @AineToole

1 Feb
Today's SARS-CoV-2 lineage of concern report for 2021-02-01 now available at cov-lineages.org/global_report.…
@arambaut @viralverity @EvolveDotZoo @MOUGK @edwardcholmes Image
A total of 73 countries have reported cases of B.1.1.7 (55 of which have sequences on GISAID). ImageImage
B.1.1.7 was assigned to 37,892 sequences on GISAID from 55 countries. 34,756 of these are from the UK. The 3 sequences from Bangladesh on GISAID now represented in the records. @senjutisaha ImageImageImageImage
Read 9 tweets
30 Jan
Updated SARS-CoV-2 lineage of concern report for 2021-01-30 now available at cov-lineages.org/global_report.…
@viralverity @arambaut @EvolveDotZoo @MOUGK @edwardcholmes
We report 72 countries with cases of B.1.1.7 (53 of which have sequences on GISAID). Georgia and Slovenia both report cases of B.1.1.7, however the report from Slovenia is informed by SGTF which will be further tested by sequencing. businessworld.in/article/Georgi… gov.si/en/news/2021-0…
In total, B.1.1.7 was assigned to 37,162 sequences on GISAID from 53 countries. 34,303 of those sequences are from the UK.
Read 10 tweets
29 Jan
Latest SARS-CoV-2 lineage of concern report for 2021-01-29 now available at cov-lineages.org/global_report.
@viralverity @arambaut @EvolveDotZoo @edwardcholmes @MOUGK
70 countries have reported cases of B.1.1.7 (53 of which have sequences on GISAID), no increase from yesterday.
pangolin assigned B.1.1.7 to 36,555 sequences on GISAID from 53 countries. 33,941 of those sequences are from the UK.
Read 9 tweets
28 Jan
Latest SARS-CoV-2 lineage of concern report for 2021-01-28 now available at cov-lineages.org/global_report. @viralverity @EvolveDotZoo @arambaut @MOUGK @edwardcholmes
70 countries have reported cases of B.1.1.7 (53 of which have sequences on GISAID). New reports today of lineage B.1.1.7 from South Africa, Senegal and Kuwait: , reuters.com/article/health…, reuters.com/article/health…
pangolin assigned B.1.1.7 to 35,649 sequences on GISAID from 53 countries. 33,153 of those sequences are from the UK. As of today, Jordan, Thailand and Malaysia are represented on GISAID in addition to countries previously sharing B.1.1.7 sequences.
Read 9 tweets
27 Jan
Updated SARS-CoV-2 lineage of concern report for 2021-01-27 now available at cov-lineages.org/global_report.… @viralverity @arambaut @EvolveDotZoo @edwardcholmes @MOUGK
67 countries have reported cases of B.1.1.7 (50 of which have sequences on GISAID). Report of 2 cases in travellers from the UK in the Gambia (2021-01-14, reuters.com/article/uk-hea…) and sequences on GISAID from Saint Lucia and French department Mayotte.
pangolin assigned B.1.1.7 to 31,907 sequences on GISAID from 50 countries. 29,566 of those sequences are from the UK. Newly represented on GISAID are Mayotte (16), St. Lucia (3) and Nigeria (1).
Read 9 tweets
26 Jan
Latest SARS-CoV-2 lineage of concern report for 2021-01-26 now available at cov-lineages.org/global_report.…
@viralverity @arambaut @EvolveDotZoo @edwardcholmes @MOUGK
pangolin assigned B.1.1.7 to 28,993 sequences on GISAID from 47 countries. 27,010 of those sequences are from the UK.
There are 668 B.1.351 sequences on GISAID from 20 countries. 524 of those sequences are from South Africa. @houzhou
Read 9 tweets

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