Confirmed #COVID19 cases up in all 9 provinces this week, but 3 are of particular concern atm:
• NC +104% and incidence rate at 40% of its 2nd wave peak = 3rd wave/resurgence of 2nd wave
• FS +63% and incidence rate now at 33% of its 2nd wave peak = start of 3rd wave
• NW +57%
Trends in test positivity rates per province confirms the increase in infection rates in NC, FS and NW, with positivity rate in MP also of concern:
Finally, for all these trends test positivity data supports the fact that the increase is real and not an artefact of increased testing. While testing has increased,the number of positive tests has increased at an even faster rate, therefore an overall increase in test positivity
Finally finally, I made up the term "Easter wave" due to the timing of the increase. This is not a 3rd wave but a reminder that #COVIDー19 is far from over! We need to understand and get on top of the resurgences in the smaller provinces now, preventing any further spread SA 🤞🙏
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I'm back with another tweet on #COVID19 in South Africa🇿🇦 (that hiatus didn't last long) 😅
A lot of questions about whether it's the right decision to stop reporting daily #SARSCoV2 data in SA?
I believe it is, for a few reasons... [Thread] 🧵
1. Yes #SARSCoV2 is still around, and won't magically disappear, but the risk of severe disease and death has reduced significantly, primarily due to high levels of population immunity in the country.
Graph of reported and in-hospital #COVID19 deaths in SA🇿🇦 shown below:
2. Testing has declined substantially, and so case numbers and even test % positivity have become unreliable as a true reflection of actual #COVID19 infection rates.
An ONS-style randomised infection survey as done in the UK🇬🇧 would be useful, but we don't have such here in SA🇿🇦
Thread.. 🧵
I have received a lot of questions about #COVID19 deaths in South Africa 🇿🇦
Here's a graph showing the different metrics of mortality: reported #COVID19 deaths, in-hospital #Covid_19 deaths, and excess deaths over the course of the pandemic :
1/n
There have been 1,274 total deaths reported over this BA.4/BA.5 or 5th wave of #COVID19 in South Africa 🇿🇦
This is just over one-fifth (21.5%) of the 5,923 cumulative deaths reported over previous Omicron BA.1 wave over the summer months & significantly less than previous waves
Reporting of #COVID19 deaths in South Africa🇿🇦 are laggy and under-estimated. Since the Omicron BA.1 wave, NDoH has been conducting audit exercises and reporting backlogs but unfortunately provide no context as to when those deaths actually occurred nor make that data available🤷♂️
With new #COVID19 cases in Gauteng🇿🇦 having peaked recently, promisingly cases didn't plateau but well on the decline now 📉
Current 7-day rolling avg at 1,609 or 10.2 per 100k, down 39% week-on-week and already down to 51% of recent peak 👍
2/6
Latest #COVID19 test % positivity in Gauteng🇿🇦 for week ending 21 May = 19.6% 📉
Testing has remained low, understandably, so test % positivity is naturally higher but after peaking it has continued to decline, confirming the decline in infections 👍
Here's an update of the latest #COVID19 indicators in Gauteng🇿🇦, where Omicron sublineages BA.4 & BA.5 are driving a 5th wave of infections
Spoiler: continued decoupling; hospitalisations and deaths remain low...
Thread 🧵 ../6
3,484 new #COVID19 cases reported in Gauteng 🇿🇦 today, 7-day rolling avg at 3,105 📈
Case incidence = 19.1 per 100k population, and up to 29% of BA.1 peak 🏔️
Case rate up 27% compared to a week ago, but even though testing remains low it's showing signs of slowing again 🧐
2/6
Latest test % positivity in Gauteng🇿🇦 for week ending 7 May = 26.2% 🚩
Testing remains significantly lower than before, not surprising... But while test % positivity is very high (1 in ~4 tests positive), it too appears to be flattening 🤞
Gauteng, with ~25% of SA's population, is once again the epicentre of a resurgence of #Covid_19 in South Africa 🇿🇦
A surge in infection rates, increasing demand on hospitalisations, reported deaths remain low...
Thread 🧵 ../n
Another 3,145 #COVID19 cases reported in Gauteng 🇿🇦 today, 7-day rolling avg at 2,117 ⬆️
Case incidence = 13.4 per 100k population, up to 20% of recent peak 🏔️
Case rate up 173% week-on-week or currently doubling every 4.8 days 📈
2/n
Latest test % positivity in Gauteng🇿🇦 for week ending 23 Apr = 20.2% 🚩
Not surprising given fewer people testing, but increase is steep, up from 11.9% a week prior. With 1 in every 5 tests returning a positive result, it also indicates many more cases going undetected 🧐