A 'how can we have a new wave with 75% of the population vaccinated' thread. Short answer is Delta is a nightmare, way, way nastier than old school Covid19 because one person on average will infect 6 with no measures in place rather than 3. /1
Imagine a 100% effective vaccine that stopped transmission completely. With old school Covid once 2 in 3 are vaccinated then the virus finds 2 of its 3 previously successful jumps to other people blocked. Above 66% vaccination 1000 cases only become 900, 750, 580 etc /2
We don't know for sure but it looks like Delta infects 6 other people without measures in place. To reduce that to 1 person 5 of those would have to be blocked by 100% effective vaccine. 5/6 is 83%. So at our 75% vaccination Delta is still getting to more than 1 person /3
We also don't have a vaccine thats 100% effective. In fact the reason most sensible people gave up talking abut herd immunity is that the math made clear in July that with Delta the concept was meaningless. Vaccination would slow the pandemic - very important but not stop it /4
So plan B is that the vaccines greatly reduce the percentage of cases that get hospitalised or go to ICU. The pressure on the health service gets cut if everyone is vaccinated to a fraction of the previous level. Thats the whole 'living with the virus' / endemic bit /5
Problem is even with 100% vaccination a lot of people get hospitalised each year if the vaccine is say 95% effective at stopping hospitalisation. And if 10% don't get vaccinated well then a lot of them get hospitalised too & they also infect more people. /6
So the other bit of 'living with the virus' is hoping that the unvaccinated get infected & mostly survive at a rate that doesn't overwhelm healthcare. And that infection gives them sufficient immunity against future hospitalisations that the problem reduces over times /7
But we know all forms of immunity against infection wane. So we will keep seeing waves of infection - the huge but unknown question is what proportion of 3rd or 4th infections etc get hospitalised. If that stays high (say 3 per 1000) we are in a lot of trouble /8
The pandemic has been characterised by people who claimed to have exact answers to the unknowns above. Most useful experts say 'we don't yet know, 'we need to research that' there isn't enough data yet' - which means we need to be careful about risk and be willing to reverse
The above is an assemblage of my understanding based of listening to actual experts, which I've then simplified to make it easy to explain (eg no herd immunity threshold formulas). So open to correction if I've over done that - Think in terms of ballpark its correct though

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More from @andrewflood

11 Oct
Le Sigh - an early update of the NPHETs Exit #Covid19Ireland cases plot confirms what looks like the start of the 5th wave with
1358 cases 152% last Monday
9999 cases this week at 113% previous
With the end of contact tracing in schools we should have seen a missed case drop /1
The potential emerging 5th wave is also clear on the New Hospital Cases Plot - the doubling of case severity in the last 2-3 weeks is an unexplained concern
400 hospital is 120% last Monday
308 new hospital cases this week is 116% last week
NHC were 3.65% cases in previous week/2
Likewise ICU shows a rise when NPHETs Exit expected a fall - we did well for 2 months, now its at least doubtful
75 ICU is 117% last Monday
36 ICU admissions is 109% previous week
ICU admissions are 12.5% NHC
/3
Read 5 tweets
11 Oct
Last 3 days of #Covid19Ireland confirms bad news of what may be the start of wave 5. Swabs over those 3 days are 132% of the same days last week & positivity now up to 10% confirming this isn't an impact of more testing
Sat 1722, 144%
Sun 1523, 118%
Mon 1449, 136%
/1
We are also seeing that potential 5th wave in New Hospital Cases
400 hospital is 120% last Monday
308 new hospital cases this week is 116% last week
NHC were 3.65% cases in previous week /2
And if not yet as strong in ICU
75 ICU is 117% last Monday
36 ICU admissions is 109% previous week
ICU admissions are 12.5% NHC
/3
Read 9 tweets
11 Oct
Latest HPSC deaths from vaccine breakthrough allows calculation that c55% of Covid deaths in Aug/Sept were of fully vaccinated people.
BT deaths / Total / Percentage
Aug. 48 / 71 / 68%
Sept 56 / 117 / 48%
Both 104 / 188 / 55%
/1
Note with pretty much everyone over 65 fully vaccinated & vast majority (91.3%) of pre vaccine deaths in that age group this actually shows a very very high vaccine protection - but not 100% (high 90s at least). But 50 post vaxx deaths a month from endemic Covid happened /2
The HPSC report itself has a vaccine breakthrough deaths percentage of 36.5% however I think thats artificially low in terms of what we can expect because it includes a period where a large segment of the population was not yet vaccinated - Sept may be incomplete /3
Read 5 tweets
11 Oct
Yikes, hospital cases are starting to look like the start of a #Covid19Ireland 5th wave - now really is the 2nd best time to get vaccinated if you've been putting it off.
8th of March was the last time we had 400 hospital cases so yes this is a Monday high but still a high
Vaccination is doing a great job of reducing our mortality - Eastern European counties with low vaccination rates are starting to get hammered as cases surge again but UK mortality being twice our rate is a warning that cases still come with a mortality cost /2
I abandoned posting detailed daily updates a few weeks back & switched to one big weekly one but I'm still checking the key data every day & taking notes in case the exit goes seriously wrong quickly - I'm not too happy with trends of the last few days /3
Read 10 tweets
9 Oct
#SaveTheCobblestone now at the council buildings after marching via Merchants Arch - quite a crowd - it appears the pandemic exit may well see a significant return to street protest as we contest what that world will look like. Wall to wall hotels not being a popular option
Oró Sé Do Bheatha 'Bhaile at #SaveTheCobblestone /3
Read 5 tweets
8 Oct
A general comment - high levels of vaccination has allowed the risk of moving on from significant restrictions with 1/4 of the population unvaccinated (2/3 not eligible to be). In the Irish HCare context the main role 18 months of NPIs had was buying time for vaccinations /1
Our health system was too under resourced for 'flatten the curve' to have been sustainable as a route to population immunity. With too few ICUs that would have taken 5 years of switching between some opening & lockdown to avoid high excess deaths when ICUs ran out. /2
It would also have involved in the region of 40k deaths over those years - thats the IFR for a population with our age structure and where hospital oxygen does not run out. If the curve is not flattened it probable doubles or worse. But we mostly stalled Covid till vaccination/3
Read 13 tweets

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