Apples 🍎 to oranges 🍊 comparison alert

Ref. A recent small retrospective study on Covaxin showed “50% effectiveness”. See link for paper & comment

I saw @GargiRawat was unfairly criticised for reporting

See thread; it takes time to understand👇

1/16

thelancet.com/journals/lanin…
1. The original efficacy study on Covaxin was a randomised controlled trial involving over 25,798 people.

This showed 77.8% efficacy against symptomatic disease, 93.4% against severe disease, 63.6% for asymptomatic and 65.2% at delta variant. Had tweeted in detail earlier.

2/
A randomised study starts with 2 groups of people. One gets vaccine, the other gets placebo. They are observed “prospectively” that is looking forward-during a study period. Disease outcomes are measured & compared between the groups. The % difference is reported as efficacy.

3/
The first study (RCT) was done at a time when the Delta variant had not become dominant. RCT is the gold standard for measuring vaccine efficacy. It is also easier to do early during a pandemic.

(It was not based in a hospital where excessive viral load is the norm)

4/
2. The recent study was done on only 2714 healthcare workers who underwent covid testing during a severe delta surge. It was a community study.

Think of it like holding an umbrella ☔️(vaccine) in a torrential rain, the earlier study was the same umbrella in a light drizzle.

5/
3. The recent study had a different design (hence “apple vs orange”) which is called a “test negative case control design”.

This is not the same as a randomised controlled trial. The results cannot be directly compared to start with. It was a retrospective “field” study.

6/
4. People often compare the marks of two students who took an exam from the same school, & conclude that one student “did better than the other”.

These two covaxin studies do not work like that. We need to understand that first. (That’s a lot of biostatistics & epidemiology)

7/
5. The first study (RCT on covaxin) was done all over India in November and January. Delta had just arrived. Among 50 cases of delta found, 13 were in the vaccine group and 37 were in the placebo group, resulting in a vaccine efficacy against delta of 65·2% (95% CI 33·1–83·0)

8/
6. The second study was done from April to May - exclusively on healthcare workers in AIIMS Delhi.

2714 people who underwent testing were divided into two groups, test positive and test negative. The authors checked how many in each group were vaccinated and unvaccinated.

9/
They compared 1068 case-control pairs and calculated an effectiveness of 50%.

7. However, remember that these are healthcare workers who could easily have had natural immunity from past infections, many of whom were asymptomatic. Serology was not done to identify these.

10/
That being said, even if serology was done, it would not pick up people who were infected more than six months ago, because antibodies would decline below detection limit.

This means that both cases and control groups will be “confounded by” presence of natural immunity.

11/
🔺This confounding will invariably reduce the difference between the two groups.

In other words, if the control group (negative) had NEVER had past natural infection, then the vaccination group would have shown a GREATER protection by vaccine, higher % “effectiveness”.

12/
As I wrote earlier, this confounding factor is distorting the vaccine narrative, artificially exaggerating the decline of vaccine effectiveness, which in turn fuels the push for boosters.

(There is no real evidence of decline in effectiveness @ severe disease after 2 doses)

13/
In fact, confirming this further, the authors have stated that in the control group, 11% had reported prior infection; while in the test positive group it was only 3.6%.

This means that the control group had enjoyed “unseen natural protection” even without vaccination.

14/
Thus, the 50% result must be viewed after considering the baseline difference between the two comparison groups.

E.g. while measuring the height of two individuals, if the shorter person is wearing high heeled 👠 shoes, the height DIFFERENCE between the two will be SMALLER.

15/
Thus, unlike a randomised trial done in 2020 where the placebo group is more likely to be previously UNINFECTED, (and therefore immunologically UNPROTECTED) the control group in the new study is not so.

In other words, the control group “was wearing high heeled shoes”.

16/
Thus, the measured DIFFERENCE in infection rates (which is how vaccine effectiveness is still calculated) between vaccinated & vaccinated populations is getting SMALLER as the pandemic is almost 2 years old now. This factor must be considered while interpreting such studies.

17/
In fact, what matters in the months ahead will be to measure the severity of the disease among these groups, while acknowledging the narrowing immunity gap between them.

This was not possible because severe disease was not reported in this study. It requires larger numbers.

18/
In summary, reading “just the conclusion” of any study without understanding basic biostatistics and epidemiology will lead to erroneous and wrong conclusions.

It is unfair to criticise media who attempt to report scientific studies.

19/19

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More from @RajeevJayadevan

25 Nov
From our weekly COVID-19 meetings that had been going on ever since the pandemic started, we issued several advisories to policy makers, media, doctors and the general public.

From this week:

🚩Ignoring early symptoms (e.g. fever) can lead to severe outcomes.

Thread 👇

1/5
COVID-19 has established treatments available such as

1. dexamethasone (saved more lives than all other drugs in COVID-19; but ONLY when used in the right patient, at the right time, in the right dose)

and

2. monoclonal antibodies (only for select indications)

2/
If the diagnosis is delayed, these medications cannot be given, we call it “the window of therapeutic opportunity”

Which means the drugs don’t produce the desired effect once that window has passed

Which means our delay is allowing preventable complications to set in

3/
Read 5 tweets
25 Nov
Myocarditis with mRNA vaccine.

“Patients invariably had chest pain” is a misleading statement.

It is more like “In all REPORTED cases of myocarditis, chest pain was present”

Note myocarditis need not cause chest pain, hence not all patients will seek medical attention.

1/
The diagnostic criteria of “myocarditis” are given below.

However, patients are more likely to notice chest pain than other symptoms. Hence these people get diagnosed, (and reported).

Chest pain is more likely in those who ALSO have PERICARDITIS.

2/

ahajournals.org/doi/pdf/10.116…
Myocarditis can occur with other symptoms like palpitations, shortness of breath or may not cause overt symptoms.

Myocarditis might only cause ECG or ECHO cardiogram abnormalities or isolated elevation in cardiac enzymes like Troponin.

This means we could be missing cases.

3/
Read 9 tweets
23 Nov
The pain of a father who lost his son following vaccination.

There is no doubt a trend to deny such deaths for “lack of proof”

Rare. But these are the hidden casualties.

Article shared by a Japanese doctor.

Unfortunately, talking about the downside of vaccination is taboo. ImageImageImage
Talking of the adverse outcomes following vaccination is not the same as “anti vaxx”

In fact, denying downsides by hiding behind the heavy curtains of “proof” is unscientific.

Most medical interventions have downsides. And not everyone has the same risk tolerance.

2/
Ridiculing those who are reluctant to vaccinate is a trend in the west.

Can’t agree with that.

There are people who are afraid to fly, despite knowing that flights are safer than driving. No one ridicules them. At least I don’t.

3/
Read 10 tweets
15 Nov
No decline in real world effectiveness of vaccine against death & hospitalisation. Graphs are drawn from Minnesota data.

I have used a ratio of event rates among unvaccinated : vaccinated population. The graphs show death & hospitalisation rates.

1/5

health.state.mn.us/diseases/coron…
The ratios are based on vaccination % prevailing 30 days prior to each data point, so that it reflects the true effect of vaccination.

It must also be kept in mind that the vaccinated segment by default are older, more likely to fall sick and have serious outcomes.

2/
This implies that the ratios are an underestimate of the true protection offered by vaccines.

In other words, we are not comparing groups of equal health status when we do a ratio of the unvaccinated and vaccinated.

The true protection will be larger.

3/
Read 5 tweets
15 Nov
Two doses of vaccine generate long-lived and stable Memory T cells.

The longevity of immune response to SARS-CoV2 virus depends on the presence and stability of memory cells of the B & T genre.

This is a landmark paper from Rome by Guerrera et al.

1/

science.org/doi/10.1126/sc…
The presence of long lived memory B cells had previously been established in several papers, see my tweets. This paper focuses on memory T cells in response to 2 doses of mRNA vaccine.

I will discuss some basic immunology first, to help understand the context of this paper.

2/
Following the innate response, the adaptive immulogical response to a virus infection is basically two pronged.

The two arms are T cells and B cells.

B cells make antibodies which work like security guards OUTSIDE our gate, preventing the thief from entering the premises.

3/
Read 14 tweets
14 Nov
The most powerful graph that I have seen of the pandemic.

This calls for a rethink of vaccination strategy.

Note the sharp demarcation around age 40-45.

Vaccination of this 40+ segment needs priority.

Below that age, it could even be made optional. Here’s why👇

(Thread)
Although vaccines were launched with a hope of stopping transmission and further waves, we have seen that high % vaccination coverage does not stop subsequent waves. This is because they are ineffective in providing mucosal immunity; virus is silently spreading in communities.
2/
At the same time, we have found that vaccines are not 100% benign products as is often suggested by certain academics.

They have failed to acknowledge the small but significant number of serious and fatal outcomes is that occurred - particularly among younger individuals.

3/
Read 31 tweets

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